Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.3e-162 575.5 290 100.0
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 8.3e-152 540.4 290 94.1
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 2.8e-147 525.4 289 91.3
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 5.2e-146 521.2 289 88.9
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 6.8e-146 520.8 288 91.3
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 1.5e-145 519.6 289 89.6
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.6e-145 518.8 288 89.9
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 7.6e-145 517.3 289 88.2
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 4.9e-144 514.6 290 87.6
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 1.1e-143 513.5 289 88.2
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.1e-143 513.5 289 87.5
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 2.4e-143 512.3 290 86.9
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 3.2e-143 511.9 289 88.9
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.2e-143 511.9 289 87.9
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 7.1e-143 510.8 289 87.5
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 1.2e-142 510.0 289 86.9
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 1.2e-142 510.0 289 86.9
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.2e-142 510.0 289 87.9
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 2.1e-142 509.2 290 86.2
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 2.7e-142 508.8 289 87.2
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 4.6e-142 508.1 290 85.9
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 6.0e-142 507.7 290 85.5
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 6.0e-142 507.7 289 86.2
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 7.8e-142 507.3 290 85.5
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 1.3e-141 506.5 288 87.8
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 2.3e-141 505.8 286 87.1
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 2.3e-141 505.8 289 86.9
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 3.0e-141 505.4 289 87.2
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 6.6e-141 504.2 290 85.2
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.9e-140 502.7 289 85.1
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.5e-140 502.3 289 85.5
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 2.5e-140 502.3 290 84.8
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 3.3e-140 501.9 289 87.2
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 4.3e-140 501.5 289 85.5
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 5.6e-140 501.1 289 85.8
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 7.3e-140 500.7 290 85.5
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.2e-139 500.0 290 85.5
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.6e-139 499.6 290 84.8
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 2.8e-139 498.8 291 86.3
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 3.6e-139 498.4 289 84.8
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 4.7e-139 498.0 289 84.1
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 4.7e-139 498.0 289 84.8
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 4.7e-139 498.0 289 84.1
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 4.7e-139 498.0 289 84.1
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 6.2e-139 497.7 289 86.5
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 6.2e-139 497.7 290 85.9
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 8.1e-139 497.3 289 86.9
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 1.1e-138 496.9 289 83.7
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 1.1e-138 496.9 289 83.7
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 1.1e-138 496.9 289 84.1
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 1.1e-138 496.9 287 86.8
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 1.8e-138 496.1 290 85.2
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.4e-138 495.7 289 84.8
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 2.4e-138 495.7 289 83.7
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 2.4e-138 495.7 289 84.4
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 2.4e-138 495.7 289 83.7
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 2.4e-138 495.7 291 84.9
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 3.1e-138 495.4 289 84.4
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.1e-138 495.4 287 86.1
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.1e-138 495.4 287 86.1
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 5.2e-138 494.6 290 84.1
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.2e-137 493.4 287 87.5
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.5e-137 493.0 288 86.1
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 2.0e-137 492.7 285 86.0
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 2.6e-137 492.3 290 85.2
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.4e-137 491.9 290 83.4
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.4e-137 491.9 288 86.1
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 3.4e-137 491.9 290 85.2
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 4.4e-137 491.5 287 87.1
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 7.6e-137 490.7 302 82.8
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 1.7e-136 489.6 289 85.5
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 2.2e-136 489.2 289 85.5
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.9e-136 488.8 289 85.1
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 2.9e-136 488.8 287 86.8
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 3.8e-136 488.4 290 82.4
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 3.8e-136 488.4 289 83.7
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.8e-136 488.4 290 82.8
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 3.8e-136 488.4 289 85.1
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 4.9e-136 488.0 290 84.5
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 6.4e-136 487.6 290 84.5
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 8.4e-136 487.3 289 84.1
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 1.4e-135 486.5 290 84.1
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.9e-135 486.1 289 84.8
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 2.4e-135 485.7 289 84.1
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 7.1e-135 484.2 290 81.4
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 9.3e-135 483.8 287 85.0
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.5e-134 481.9 291 85.2
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 4.6e-134 481.5 286 82.9
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 4.6e-134 481.5 290 82.4
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 4.6e-134 481.5 290 83.4
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 7.8e-134 480.7 290 83.4
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.0e-133 480.3 290 84.1
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 2.3e-133 479.2 288 84.0
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 2.3e-133 479.2 303 82.2
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 5.1e-133 478.0 293 83.3
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 5.1e-133 478.0 289 83.4
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 6.6e-133 477.6 285 82.1
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 1.5e-132 476.5 290 81.4
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.9e-132 476.1 287 81.2
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 1.6e-131 473.0 287 82.2
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 3.6e-131 471.9 322 76.7
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.4e-130 469.9 293 82.9
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 4.0e-130 468.4 293 82.9
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 5.3e-130 468.0 290 79.7
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 1.5e-129 466.5 289 79.2
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 1.5e-129 466.5 290 79.3
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 2.0e-129 466.1 301 79.1
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 9.9e-129 463.8 292 81.5
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 9.9e-129 463.8 294 79.6
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 9.9e-129 463.8 289 79.2
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 1.7e-128 463.0 290 78.6
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 4.9e-128 461.5 288 79.5
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 2.4e-127 459.1 290 79.0
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 2.4e-127 459.1 289 77.9
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 7.1e-127 457.6 287 78.4
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.2e-126 456.8 306 77.5
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 1.1e-124 450.3 290 76.9
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 1.3e-123 446.8 286 78.3
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 3.6e-123 445.3 290 77.9
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 8.1e-123 444.1 261 86.6
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.8e-122 443.0 448 56.9
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 3.1e-122 442.2 271 80.8
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 5.3e-122 441.4 307 72.6
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 4.2e-119 431.8 292 78.4
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 4.2e-119 431.8 289 74.4
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 7.1e-119 431.0 299 75.9
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 3.5e-118 428.7 289 74.4
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.3e-117 426.8 291 73.9
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.8e-117 426.4 291 73.5
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 2.3e-117 426.0 309 72.8
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 3.0e-117 425.6 291 73.5
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 4.3e-116 421.8 283 74.2
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 1.3e-115 420.2 232 89.7
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 2.8e-115 419.1 293 72.7
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 1.2e-113 413.7 256 78.9
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 2.6e-113 412.5 230 87.8
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 8.4e-112 407.5 294 70.7
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 1.0e-109 400.6 257 78.2
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.3e-109 400.2 290 67.2
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.9e-108 396.4 290 66.6
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 4.3e-108 395.2 290 66.6
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 8.2e-107 391.0 285 66.3
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.2e-105 387.1 232 81.9
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 2.7e-102 375.9 298 68.8
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 1.1e-92 344.0 289 60.6
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 4.7e-86 322.0 270 66.7
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 3.9e-85 318.9 203 80.3
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 7.4e-84 314.7 285 58.2
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 2.0e-76 290.0 287 52.6
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 5.3e-74 282.0 285 51.9
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 1.2e-70 270.8 282 49.3
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.8e-69 266.9 164 78.7
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 7.5e-68 261.5 286 47.9
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 3.7e-59 232.6 154 72.7
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 8.6e-56 221.5 139 82.7
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 5.6e-55 218.8 113 94.7
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 5.2e-53 212.2 151 73.5
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 2.7e-25 120.2 82 74.4
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 6.0e-25 119.0 79 75.9
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 1.9e-23 114.0 79 73.4
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 3.3e-23 113.2 124 50.0
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 4.7e-22 109.4 79 70.9
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 8.1e-22 108.6 74 74.3
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 2.4e-21 107.1 152 42.1
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 1.2e-20 104.8 66 77.3
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 1.5e-20 104.4 63 82.5
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.1e-18 98.2 80 65.0
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 3.0e-16 90.1 57 77.2
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 1.9e-15 87.4 70 64.3
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 3.6e-14 83.2 61 65.6
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 3.6e-14 83.2 61 65.6
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.7e-11 74.3 55 67.3
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 3.0e-08 63.5 60 61.7
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 6.7e-08 62.4 46 63.0
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 5.6e-07 59.3 32 87.5


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