Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G070216 Manihot esculenta HOM05D003481 ORTHO05D004001 2.0e-212 742.3 392 100.0
Dinv03119 Davidia involucrata HOM05D003481 ORTHO05D004001 4.9e-171 604.7 389 82.8
CSS0014471 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 5.9e-169 597.8 392 81.1
Ciclev10014122m.g Citrus clementina HOM05D003481 ORTHO05D004001 5.0e-168 594.7 389 81.2
Hma1.2p1_0410F.1_g147020 Hydrangea macrophylla HOM05D003481 ORTHO05D004001 5.4e-162 574.7 357 83.2
CiPaw.09G149800 Carya illinoinensis HOM05D003481 ORTHO05D004001 6.8e-157 557.8 391 78.3
Thecc.06G002800 Theobroma cacao HOM05D003481 ORTHO05D004001 7.1e-154 547.7 390 76.4
TWI38G1754 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 1.0e-152 543.9 392 75.5
TWI15G0246 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 1.1e-151 540.4 392 75.5
CsaV3_6G052920 Cucumis sativus L. HOM05D003481 ORTHO05D004001 3.3e-151 538.9 389 74.8
ClCG01G025690 Citrullus lanatus HOM05D003481 ORTHO05D004001 9.5e-151 537.3 389 74.8
COL.COLO4_26841 Corchorus olitorius HOM05D003481 ORTHO05D004001 1.2e-150 537.0 390 75.4
Actinidia02453 Actinidia chinensis HOM05D003481 ORTHO05D004001 6.2e-150 534.6 399 73.7
Duzib235G1444 Durio zibethinus HOM05D003481 ORTHO05D004001 6.2e-150 534.6 390 75.1
Lj1A1155T51 Lonicera japonica HOM05D003481 ORTHO05D004001 2.0e-148 529.6 365 78.1
RcHm_v2.0_Chr3g0448451 Rosa chinensis HOM05D003481 ORTHO05D004001 7.6e-148 527.7 373 74.8
TAR626G0933 Trochodendron aralioides HOM05D003481 ORTHO05D004001 9.9e-148 527.3 402 71.1
MD04G1237800 Malus domestica HOM05D003481 ORTHO05D004001 1.3e-147 526.9 359 76.6
Sed0003597 Sechium edule HOM05D003481 ORTHO05D004001 1.7e-147 526.6 389 73.5
MELO3C007016.2 Cucumis melo HOM05D003481 ORTHO05D004001 2.2e-147 526.2 408 71.1
Atru.chr8.321 Acer truncatum HOM05D003481 ORTHO05D004001 2.9e-147 525.8 357 77.3
Duzib160G0577 Durio zibethinus HOM05D003481 ORTHO05D004001 4.9e-147 525.0 389 74.3
Cfa000748 Carpinus fangiana HOM05D003481 ORTHO05D004001 1.4e-146 523.5 390 74.6
Gohir.D10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 1.4e-146 523.5 389 72.5
Gorai.011G004800 Gossypium raimondii HOM05D003481 ORTHO05D004001 1.4e-146 523.5 389 72.5
MD12G1256000 Malus domestica HOM05D003481 ORTHO05D004001 1.9e-146 523.1 361 75.9
Gohir.A10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 2.4e-146 522.7 389 73.0
THA.LOC104812894 Tarenaya hassleriana HOM05D003481 ORTHO05D004001 3.5e-145 518.8 398 72.1
CARHR226290 Cardamine hirsuta HOM05D003481 ORTHO05D004001 1.3e-144 516.9 392 71.7
Carub.0007s2172 Capsella rubella HOM05D003481 ORTHO05D004001 1.7e-144 516.5 392 71.4
Nn4g25046 Nelumbo nucifera HOM05D003481 ORTHO05D004001 6.6e-144 514.6 410 69.5
Sed0000926 Sechium edule HOM05D003481 ORTHO05D004001 8.6e-144 514.2 389 72.2
BcaC09g51402 Brassica carinata HOM05D003481 ORTHO05D004001 1.1e-143 513.8 398 71.1
C01p13480 Brassica napus HOM05D003481 ORTHO05D004001 1.1e-143 513.8 398 71.1
BolC1t01321H Brassica oleracea HOM05D003481 ORTHO05D004001 1.1e-143 513.8 398 71.1
AL7G34630 Arabidopsis lyrata HOM05D003481 ORTHO05D004001 1.9e-143 513.1 394 71.3
Thhalv10024300m.g Eutrema salsugineum HOM05D003481 ORTHO05D004001 3.3e-143 512.3 393 71.2
BraA01t01089Z Brassica rapa HOM05D003481 ORTHO05D004001 5.6e-143 511.5 398 70.6
A01p11430 Brassica napus HOM05D003481 ORTHO05D004001 9.6e-143 510.8 398 70.4
arahy.Tifrunner.gnm1.ann1.D6X22R Arachis hypogaea HOM05D003481 ORTHO05D004001 1.6e-142 510.0 409 67.7
Sp7g18100 Schrenkiella parvula HOM05D003481 ORTHO05D004001 2.1e-142 509.6 395 70.1
AT4G19490 Arabidopsis thaliana HOM05D003481 ORTHO05D004001 2.4e-141 506.1 394 70.6
Sabra11G0145500 Salix brachista HOM05D003481 ORTHO05D004001 3.1e-141 505.8 374 71.1
Eucgr.K01948 Eucalyptus grandis HOM05D003481 ORTHO05D004001 4.0e-141 505.4 385 70.4
Glyma.15G192300 Glycine max HOM05D003481 ORTHO05D004001 4.0e-141 505.4 398 70.6
Aa31LG6G2100 Aethionema arabicum HOM05D003481 ORTHO05D004001 2.6e-140 502.7 383 71.0
BcaNung01774 Brassica carinata HOM05D003481 ORTHO05D004001 2.6e-140 502.7 399 69.9
BcaNung07226 Brassica carinata HOM05D003481 ORTHO05D004001 2.6e-140 502.7 392 69.1
A03p51930 Brassica napus HOM05D003481 ORTHO05D004001 2.6e-140 502.7 391 69.3
C07p50430 Brassica napus HOM05D003481 ORTHO05D004001 3.4e-140 502.3 397 68.8
BolC7t45545H Brassica oleracea HOM05D003481 ORTHO05D004001 9.9e-140 500.7 397 68.5
AUR62005919 Chenopodium quinoa HOM05D003481 ORTHO05D004001 9.9e-140 500.7 397 68.5
Phvul.009G217900 Phaseolus vulgaris HOM05D003481 ORTHO05D004001 1.3e-139 500.4 392 69.6
FAN14G4292 Fragaria x ananassa HOM05D003481 ORTHO05D004001 2.2e-139 499.6 318 79.6
FvH4_6g01010 Fragaria vesca HOM05D003481 ORTHO05D004001 4.9e-139 498.4 318 79.2
BcaNung02560 Brassica carinata HOM05D003481 ORTHO05D004001 6.4e-139 498.0 397 68.0
BraA03t14280Z Brassica rapa HOM05D003481 ORTHO05D004001 6.4e-139 498.0 392 69.4
Glyma.09G083800 Glycine max HOM05D003481 ORTHO05D004001 1.9e-138 496.5 392 70.2
FAN02G3168 Fragaria x ananassa HOM05D003481 ORTHO05D004001 2.4e-138 496.1 316 79.1
Lsat_1_v5_gn_7_35621 Lactuca sativa HOM05D003481 ORTHO05D004001 3.2e-138 495.7 393 69.7
FAN05G1738 Fragaria x ananassa HOM05D003481 ORTHO05D004001 7.1e-138 494.6 315 79.7
Potri.011G154000 Populus trichocarpa HOM05D003481 ORTHO05D004001 7.1e-138 494.6 373 70.2
FAN09G1882 Fragaria x ananassa HOM05D003481 ORTHO05D004001 1.7e-136 490.0 312 79.5
AUR62028144 Chenopodium quinoa HOM05D003481 ORTHO05D004001 3.0e-136 489.2 362 71.8
Aqoxy7G02779 Aquilegia oxysepala HOM05D003481 ORTHO05D004001 5.1e-136 488.4 367 70.8
Lalb_Chr08g0233181 Lupinus albus HOM05D003481 ORTHO05D004001 6.6e-136 488.0 384 70.3
Hund09767 Selenicereus undatus HOM05D003481 ORTHO05D004001 8.7e-136 487.6 393 65.9
Sc13g0010770 Simmondsia chinensis HOM05D003481 ORTHO05D004001 1.1e-135 487.3 391 68.5
Ah.13g071230 Amaranthus hybridus HOM05D003481 ORTHO05D004001 8.1e-134 481.1 392 66.8
HanXRQChr04g0119881 Helianthus annuus HOM05D003481 ORTHO05D004001 1.4e-133 480.3 377 69.5
Lj6g0004300 Lotus japonicus HOM05D003481 ORTHO05D004001 1.4e-133 480.3 361 71.2
Ca_02512_v3 Cicer arietinum L. HOM05D003481 ORTHO05D004001 2.4e-133 479.6 392 67.1
ECA236G0663 Erigeron canadensis HOM05D003481 ORTHO05D004001 4.5e-132 475.3 397 66.5
Potri.001G442900 Populus trichocarpa HOM05D003481 ORTHO05D004001 7.6e-132 474.6 369 69.4
Psat0s4071g0040 Pisum sativum HOM05D003481 ORTHO05D004001 1.3e-131 473.8 389 66.1
Medtr2g047908 Medicago truncatula HOM05D003481 ORTHO05D004001 2.2e-131 473.0 398 65.8
TPR.G22668 Trifolium pratense HOM05D003481 ORTHO05D004001 2.7e-129 466.1 394 66.0
vmacro03482 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 4.6e-129 465.3 501 55.5
CDE02G2268 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 5.1e-128 461.8 409 62.3
HanXRQChr06g0183401 Helianthus annuus HOM05D003481 ORTHO05D004001 4.8e-126 455.3 388 64.7
Oeu008973.2 Olea europaea HOM05D003481 ORTHO05D004001 6.2e-126 454.9 392 64.5
Rhsim13G0126800 Rhododendron simsii HOM05D003481 ORTHO05D004001 1.4e-125 453.8 474 56.8
DCAR_001341 Daucus carota HOM05D003481 ORTHO05D004001 2.0e-124 449.9 408 61.3
Nitab4.5_0010415g0040 Nicotiana tabacum HOM05D003481 ORTHO05D004001 9.9e-124 447.6 390 63.6
EL10Ac3g05104 Beta vulgaris HOM05D003481 ORTHO05D004001 1.4e-122 443.7 397 62.5
CAN.G954.8 Capsicum annuum HOM05D003481 ORTHO05D004001 1.4e-122 443.7 380 66.1
Cc09_g07300 Coffea canephora HOM05D003481 ORTHO05D004001 2.1e-121 439.9 396 62.1
Nitab4.5_0002444g0030 Nicotiana tabacum HOM05D003481 ORTHO05D004001 2.7e-121 439.5 396 62.6
Sopen02g018780 Solanum pennellii HOM05D003481 ORTHO05D004001 3.9e-120 435.6 396 62.4
CAN.G306.7 Capsicum annuum HOM05D003481 ORTHO05D004001 6.7e-120 434.9 362 66.9
GSVIVG01037972001 Vitis vinifera HOM05D003481 ORTHO05D004001 1.9e-119 433.3 255 87.1
Sopen02g009430 Solanum pennellii HOM05D003481 ORTHO05D004001 5.6e-119 431.8 362 65.5
DCAR_004311 Daucus carota HOM05D003481 ORTHO05D004001 1.8e-117 426.8 400 62.2
SGA_v2.0_scaffold341G49384 Striga asiatica HOM05D003481 ORTHO05D004001 4.0e-117 425.6 392 61.2
Migut.H01305 Erythranthe guttata HOM05D003481 ORTHO05D004001 5.3e-117 425.2 392 61.0
HPP92_026238 Vanilla planifolia HOM05D003481 ORTHO05D004001 2.6e-116 422.9 390 61.5
Cpa.g.sc192.16 Carica papaya HOM05D003481 ORTHO05D004001 1.7e-115 420.2 298 76.2
arahy.Tifrunner.gnm1.ann1.R9RUHP Arachis hypogaea HOM05D003481 ORTHO05D004001 3.5e-113 412.5 348 64.9
PSO063G1971 Papaver somniferum HOM05D003481 ORTHO05D004001 1.1e-111 407.5 401 57.9
PSO170G3331 Papaver somniferum HOM05D003481 ORTHO05D004001 1.5e-111 407.1 401 57.9
SalBow7G3129 Salvia bowleyana HOM05D003481 ORTHO05D004001 1.1e-109 401.0 431 55.0
CDE09G0686 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 2.4e-109 399.8 359 60.2
QL05p065371 Quercus lobata HOM05D003481 ORTHO05D004001 1.0e-107 394.4 502 48.6
Haze_05983 Corylus avellana HOM05D003481 ORTHO05D004001 2.8e-102 376.3 298 72.5
Mapoly0095s0011 Marchantia polymorpha HOM05D003481 ORTHO05D004001 6.5e-99 365.2 386 52.1
QL08p057617 Quercus lobata HOM05D003481 ORTHO05D004001 4.2e-98 362.5 585 41.7
SHI31592 Sapria himalayana HOM05D003481 ORTHO05D004001 2.1e-97 360.1 364 56.6
Pp3c11_18680 Physcomitrium patens HOM05D003481 ORTHO05D004001 5.7e-95 352.1 368 50.0
Zm00001eb419780 Zea mays HOM05D003481 ORTHO05D004001 9.7e-95 351.3 377 52.8
AagrBONN_evm.TU.Sc2ySwM_228.4333 Anthoceros agrestis HOM05D003481 ORTHO05D004001 2.8e-94 349.7 395 49.4
Os04g0212200 Oryza sativa ssp. japonica HOM05D003481 ORTHO05D004001 1.8e-93 347.1 301 60.5
Actinidia29310 Actinidia chinensis HOM05D003481 ORTHO05D004001 4.1e-93 345.9 287 70.4
Zm00001eb088370 Zea mays HOM05D003481 ORTHO05D004001 9.1e-93 344.7 377 52.5
SMO137G0352 Selaginella moellendorffii HOM05D003481 ORTHO05D004001 3.8e-91 339.3 360 51.7
CSS0036853 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 7.9e-89 331.6 277 66.8
TAR624G0988 Trochodendron aralioides HOM05D003481 ORTHO05D004001 3.0e-88 329.7 258 68.6
ATR1132G122 Amborella trichopoda HOM05D003481 ORTHO05D004001 4.5e-84 315.8 323 59.1
SEGI_08137 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 4.8e-78 295.8 273 59.7
Oeu051246.1 Olea europaea HOM05D003481 ORTHO05D004001 4.5e-76 289.3 291 59.1
Peaxi162Scf00267g00085 Petunia axillaris HOM05D003481 ORTHO05D004001 2.3e-72 276.9 248 64.1
Solyc02g030100.4 Solanum lycopersicum HOM05D003481 ORTHO05D004001 3.4e-71 273.1 250 62.0
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 7.5e-71 271.9 383 45.4
CBR_g56099 Chara braunii HOM05D003481 ORTHO05D004001 8.3e-70 268.5 433 40.0
Nitab4.5_0001298g0050 Nicotiana tabacum HOM05D003481 ORTHO05D004001 1.9e-66 257.3 282 57.1
Nitab4.5_0000378g0090 Nicotiana tabacum HOM05D003481 ORTHO05D004001 2.1e-65 253.8 247 58.3
Nitab4.5_0003773g0070 Nicotiana tabacum HOM05D003481 ORTHO05D004001 5.7e-63 245.7 169 74.0
Prupe.6G356900 Prunus persica HOM05D003481 ORTHO05D004001 9.2e-45 185.3 112 81.2
Actinidia33646 Actinidia chinensis HOM05D003481 ORTHO05D004001 3.5e-44 183.3 111 80.2
TAR624G0033 Trochodendron aralioides HOM05D003481 ORTHO05D004001 6.6e-43 179.1 120 76.7
BcaNung07304 Brassica carinata HOM05D003481 ORTHO05D004001 8.6e-43 178.7 169 59.8
Solyc02g030110.2 Solanum lycopersicum HOM05D003481 ORTHO05D004001 4.0e-40 169.9 112 75.0
Nitab4.5_0000378g0100 Nicotiana tabacum HOM05D003481 ORTHO05D004001 6.4e-38 162.5 135 65.2
ATR1132G011 Amborella trichopoda HOM05D003481 ORTHO05D004001 1.2e-36 158.3 112 70.5
FvH4_5g17630 Fragaria vesca HOM05D003481 ORTHO05D004001 1.6e-33 147.9 99 68.7
FAN18G3112 Fragaria x ananassa HOM05D003481 ORTHO05D004001 1.6e-33 147.9 97 71.1
FAN27G0233 Fragaria x ananassa HOM05D003481 ORTHO05D004001 3.6e-33 146.7 145 54.5
FvH4_4g15480 Fragaria vesca HOM05D003481 ORTHO05D004001 8.1e-33 145.6 95 70.5
FAN10G3643 Fragaria x ananassa HOM05D003481 ORTHO05D004001 1.2e-31 141.7 99 66.7
FvH4_4g15181 Fragaria vesca HOM05D003481 ORTHO05D004001 9.9e-31 138.7 96 68.8
FAN11G1212 Fragaria x ananassa HOM05D003481 ORTHO05D004001 9.2e-29 132.1 99 65.7
Peaxi162Scf00267g00817 Petunia axillaris HOM05D003481 ORTHO05D004001 1.6e-28 131.3 90 73.3
Actinidia29309 Actinidia chinensis HOM05D003481 ORTHO05D004001 6.0e-28 129.4 86 73.3
Cre02.g087551 Chlamydomonas reinhardtii HOM05D003481 ORTHO05D004001 2.1e-20 104.4 226 32.3
PRCOL_00001035 Prasinoderma coloniale HOM05D003481 ORTHO05D004001 1.9e-18 97.8 303 29.4
Haze_05982 Corylus avellana HOM05D003481 ORTHO05D004001 1.3e-17 95.1 59 78.0
arahy.Tifrunner.gnm1.ann1.DYC2U6 Arachis hypogaea HOM05D003481 ORTHO05D004001 1.8e-16 91.3 89 57.3
arahy.Tifrunner.gnm1.ann1.A6QARX Arachis hypogaea HOM05D003481 ORTHO05D004001 3.1e-16 90.5 67 67.2
Nitab4.5_0001298g0070 Nicotiana tabacum HOM05D003481 ORTHO05D004001 9.0e-16 89.0 71 66.2
Nitab4.5_0025882g0010 Nicotiana tabacum HOM05D003481 ORTHO05D004001 1.6e-12 78.2 58 67.2
Sabra16G0301200 Salix brachista HOM05D003481 ORTHO05D004001 7.9e-12 75.9 120 42.5
CSS0015411 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 1.9e-10 71.2 48 72.9
MCO09G025 Micromonas commoda HOM05D003481 ORTHO05D004001 1.9e-10 71.2 236 24.6
SEGI_29135 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 1.8e-08 64.7 70 51.4
Cfa023843 Carpinus fangiana HOM05D003481 ORTHO05D004001 2.6e-07 60.8 132 29.5
RcHm_v2.0_Chr2g0113461 Rosa chinensis HOM05D003481 ORTHO05D004001 7.6e-07 59.3 72 47.2


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