Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G053732 Manihot esculenta HOM05D000002 ORTHO05D000001 5.4e-53 210.7 104 100.0
Hma1.2p1_1233F.1_g268960 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.1e-27 124.4 113 58.4
Hma1.2p1_0972F.1_g242840 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-26 121.3 113 57.5
TWI81G0321 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.4e-23 111.7 113 52.2
PGR031G0723 Punica granatum HOM05D000002 ORTHO05D000001 1.4e-21 106.3 119 52.9
Hma1.2p1_0169F.1_g074680 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-21 105.9 113 51.3
Duzib068G0621 Durio zibethinus HOM05D000002 ORTHO05D000001 3.2e-21 105.1 110 50.9
PGR044G1020 Punica granatum HOM05D000002 ORTHO05D000001 4.2e-21 104.8 119 50.4
PGR031G3830 Punica granatum HOM05D000002 ORTHO05D000001 7.2e-21 104.0 119 52.1
Manes.12G067451 Manihot esculenta HOM05D000002 ORTHO05D000001 9.3e-21 103.6 68 75.0
Duzib213G0376 Durio zibethinus HOM05D000002 ORTHO05D000001 1.3e-19 99.8 110 49.1
PGR042G0717 Punica granatum HOM05D000002 ORTHO05D000001 3.0e-19 98.6 119 50.4
MD15G1436400 Malus domestica HOM05D001635 ORTHO05D001523 7.4e-18 94.0 115 45.2
AUR62001926 Chenopodium quinoa HOM05D002878 ORTHO05D003649 1.3e-17 93.2 114 43.0
AUR62044676 Chenopodium quinoa HOM05D002457 ORTHO05D008732 1.3e-17 93.2 114 47.4
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 1.6e-17 92.8 114 43.9
Hma1.2p1_0157F.1_g069050 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-17 92.0 123 46.3
Hma1.2p1_0446F.1_g154575 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-15 85.5 115 38.3
Hma1.2p1_0635F.1_g193125 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-15 85.5 115 38.3
Hma1.2p1_1323F.1_g275535 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-15 85.5 115 38.3
Hma1.2p1_2229F.1_g317545 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-15 85.5 115 38.3
Manes.17G044701 Manihot esculenta HOM05D000002 ORTHO05D000001 5.9e-15 84.3 66 63.6
Hma1.2p1_1143F.1_g261160 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-12 76.3 115 35.7
Atru.chr9.1298 Acer truncatum HOM05D000002 ORTHO05D000001 7.9e-12 73.9 110 39.1
CANSAT80G2060 Cannabis sativa HOM05D000002 ORTHO05D000001 5.1e-11 71.2 110 36.4
Sopen05g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-09 65.1 97 36.1
Sopen10g011440 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-08 61.6 97 37.1
PSO724G0667 Papaver somniferum HOM05D000002 ORTHO05D000001 9.1e-08 60.5 111 36.0
Sopen12g027880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 60.1 121 27.3
PGR119G1442 Punica granatum HOM05D000002 ORTHO05D000001 1.5e-07 59.7 100 44.0
COL.COLO4_24432 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.0e-07 59.3 119 32.8
CANSAT35G0806 Cannabis sativa HOM05D000002 ORTHO05D000001 2.6e-07 58.9 120 30.8
Sopen06g018700 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-07 58.5 118 32.2
Sopen08g016800 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-07 58.5 111 28.8
Sopen02g008730 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-07 58.2 93 29.0
Sopen07g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-07 58.2 118 33.1
Sopen10g020370 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-07 58.2 114 25.4
FvH4_1g15230 Fragaria vesca HOM05D000529 ORTHO05D000472 5.9e-07 57.8 107 32.7
Hma1.2p1_0744F.1_g211835 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-07 57.8 107 35.5
Sopen05g008780 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-07 57.8 111 29.7
Sopen06g005240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-07 57.8 111 28.8
THA.LOC104817078 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.9e-07 57.8 55 47.3
TWI77G0249 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 5.9e-07 57.8 54 44.4
CANSAT54G1132 Cannabis sativa HOM05D000002 ORTHO05D000001 7.7e-07 57.4 82 40.2
FvH4_4g27782 Fragaria vesca HOM05D000002 ORTHO05D000001 7.7e-07 57.4 107 32.7
CAN.G143.2 Capsicum annuum HOM05D000002 ORTHO05D000001 1.0e-06 57.0 55 41.8
Hma1.2p1_1812F.1_g303650 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-06 57.0 107 35.5
Sopen01g011990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen01g026060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen01g026910 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen02g004900 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen02g011170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen02g033300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen02g034340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen03g016290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen04g008130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen04g020510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen04g020670 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-06 57.0 118 31.4
Sopen04g020830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen04g021700 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen04g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen04g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen05g008880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen05g009730 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen05g016200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen05g018580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 113 27.4
Sopen05g021330 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen05g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen06g017460 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen07g002540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen07g025430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen08g006370 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen08g016750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen08g018380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen08g018390 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen08g023630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen09g007620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen09g021990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen09g022710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen10g020120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen10g023070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen10g028080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen11g011440 Solanum pennellii HOM05D000004 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen11g014570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen12g007580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen12g021260 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen12g023160 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 57.0 118 31.4
Sopen12g032230 Solanum pennellii HOM05D000398 ORTHO05D000551 1.0e-06 57.0 118 31.4
CSS0033484 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.6 54 44.4
CSS0036457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.6 54 44.4
Sopen01g007140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 111 27.0
Sopen06g034970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 56.6 118 31.4
CANSAT64G2842 Cannabis sativa HOM05D000002 ORTHO05D000001 1.7e-06 56.2 116 28.4
CAN.G1141.4 Capsicum annuum HOM05D000834 ORTHO05D000909 1.7e-06 56.2 55 41.8
Eucgr.I00455 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.7e-06 56.2 46 50.0
Sopen02g010110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-06 56.2 118 31.4
CSS0009999 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 55.8 111 27.0
CSS0022242 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 55.8 111 26.1
PSO384G0149 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-06 55.8 80 41.2
Sopen02g010960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 55.8 115 31.3
Sopen09g007040 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 55.8 118 31.4
CAN.G1133.2 Capsicum annuum HOM05D000002 ORTHO05D000001 2.9e-06 55.5 56 39.3
QL03p008741 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-06 55.5 120 30.0
QL08p032395 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-06 55.5 120 30.0
Sopen09g023910 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-06 55.5 55 40.0
Sopen12g023730 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-06 55.5 116 31.0
CSS0010420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-06 55.1 54 42.6
CAN.G118.4 Capsicum annuum HOM05D004158 ORTHO05D000001 3.8e-06 55.1 55 38.2
ECA233G4598 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-06 55.1 55 41.8
Hma1.2p1_2957F.1_g330780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.8e-06 55.1 107 35.5
Sopen01g011300 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.1 118 30.5
Sopen04g008180 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.1 107 28.0
Sopen04g024180 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.1 118 30.5
Sopen09g014450 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.1 111 28.8
Sopen11g011100 Solanum pennellii HOM05D010988 ORTHO05D000137 3.8e-06 55.1 115 33.0
TWI31G1208 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.8e-06 55.1 54 42.6
CSS0047378 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 119 31.1
CANSAT01G0757 Cannabis sativa HOM05D000002 ORTHO05D000001 5.0e-06 54.7 54 42.6
CAN.G203.23 Capsicum annuum HOM05D000002 ORTHO05D000001 5.0e-06 54.7 54 40.7
ECA240G2787 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-06 54.7 55 38.2
Prupe.2G065000 Prunus persica HOM05D000002 ORTHO05D000001 5.0e-06 54.7 55 41.8
QL12p018234 Quercus lobata HOM05D000002 ORTHO05D000001 5.0e-06 54.7 120 30.0
Sopen04g010540 Solanum pennellii HOM05D000004 ORTHO05D000001 5.0e-06 54.7 55 38.2
Sopen10g016160 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 54.7 55 38.2
CSS0013919 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-06 54.3 118 29.7
ECA233G0938 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Lalb_Chr01g0006171 Lupinus albus HOM05D000002 ORTHO05D000001 6.5e-06 54.3 117 27.4
Lalb_Chr03g0030681 Lupinus albus HOM05D000002 ORTHO05D000001 6.5e-06 54.3 117 27.4
Sopen00g006270 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen00g006600 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen01g007800 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen01g007900 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen01g012410 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 106 28.3
Sopen01g014950 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen01g023410 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen01g027330 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen01g038030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen02g009520 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen02g010640 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen03g008200 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen03g008240 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen03g020050 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen04g009800 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen04g014580 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen04g021270 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 6.5e-06 54.3 55 38.2
Sopen05g026710 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen06g019030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen07g005710 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen07g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen08g010560 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen08g019140 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen08g025650 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen09g012550 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen09g022260 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen09g022900 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen10g006990 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen10g018790 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen10g025560 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen11g011350 Solanum pennellii HOM05D000004 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen11g017580 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen11g021620 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen12g010220 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
Sopen12g019170 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 55 38.2
CSS0000797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 54 42.6
CAN.G1121.10 Capsicum annuum HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 43.6
ECA232G2917 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 40.0
ECA232G4299 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 41.8
ECA240G2531 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 41.8
PSO675G8921 Papaver somniferum HOM05D000002 ORTHO05D000001 8.5e-06 53.9 80 41.2
Sopen03g027370 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 38.2
Sopen07g021590 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 38.2
Sopen08g019250 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 38.2
Sopen09g009080 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-06 53.9 55 38.2
Sopen12g023910 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-06 53.9 118 31.4


User provided reference genes

Program Settings