Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 0.0e+00 1321.6 680 100.0
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 3.3e-300 1034.6 753 73.0
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 1.2e-297 1026.2 748 73.0
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 3.8e-296 1021.1 751 72.0
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.1e-295 1019.6 751 72.4
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 3.2e-295 1018.1 759 71.8
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 4.2e-295 1017.7 754 71.6
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 7.1e-295 1016.9 754 71.5
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 3.5e-294 1014.6 758 71.0
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 1.3e-291 1006.1 757 70.0
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 3.7e-291 1004.6 755 71.0
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 8.1e-291 1003.4 755 70.6
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 3.1e-290 1001.5 749 71.2
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 5.3e-290 1000.7 752 70.3
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 1.2e-289 999.6 744 70.0
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 6.5e-288 993.8 750 69.9
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.5e-287 991.9 756 69.3
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 4.6e-286 987.6 755 69.9
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 5.1e-285 984.2 747 70.4
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 7.4e-284 980.3 747 69.5
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 3.7e-283 978.0 750 69.9
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.5e-281 972.6 726 71.5
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 2.5e-279 965.3 750 68.1
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 7.2e-279 963.8 748 69.0
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 2.1e-278 962.2 751 68.8
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 4.6e-278 961.1 746 68.2
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 5.7e-276 954.1 745 67.2
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 1.1e-274 949.9 752 67.7
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 1.1e-274 949.9 749 68.0
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 1.4e-274 949.5 745 66.2
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 2.4e-274 948.7 749 68.1
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 2.4e-274 948.7 748 67.4
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 4.5e-273 944.5 744 68.3
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 5.9e-273 944.1 746 68.0
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 3.8e-272 941.4 755 67.3
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 5.0e-272 941.0 757 67.5
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 1.1e-271 939.9 753 67.6
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.4e-271 939.5 786 64.5
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.2e-270 936.4 747 66.3
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 1.2e-270 936.4 758 66.4
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 7.9e-270 933.7 759 66.9
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 7.9e-270 933.7 751 67.1
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 1.8e-269 932.6 748 66.6
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 5.1e-269 931.0 744 67.3
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 6.7e-269 930.6 756 65.6
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 6.7e-269 930.6 755 66.8
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 8.8e-269 930.2 745 67.1
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 8.8e-269 930.2 747 66.9
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 1.1e-268 929.9 752 66.6
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.1e-268 929.9 755 66.9
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 5.7e-268 927.5 743 65.4
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 9.7e-268 926.8 759 67.2
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 1.3e-267 926.4 744 66.5
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 6.3e-267 924.1 753 66.1
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 6.3e-267 924.1 746 67.2
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 1.1e-266 923.3 747 66.3
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 1.4e-266 922.9 782 65.3
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 1.4e-266 922.9 747 67.1
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 1.4e-266 922.9 793 62.7
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 1.8e-266 922.5 747 64.9
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 5.3e-266 921.0 747 64.9
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 2.0e-265 919.1 752 64.6
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 2.6e-265 918.7 747 66.8
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 2.9e-264 915.2 751 65.0
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 2.9e-264 915.2 748 65.9
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 1.4e-263 912.9 735 65.9
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 5.5e-263 911.0 750 66.7
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 1.6e-262 909.4 749 66.5
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 4.7e-262 907.9 748 65.8
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 2.3e-261 905.6 749 66.4
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 1.5e-260 902.9 780 63.8
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 2.0e-260 902.5 753 66.0
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 3.3e-260 901.7 780 62.8
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 4.4e-260 901.4 746 65.4
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 5.7e-260 901.0 738 65.4
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 7.4e-260 900.6 746 66.0
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 9.7e-260 900.2 749 65.8
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 8.5e-256 887.1 748 62.2
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 6.1e-254 880.9 759 62.6
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 1.0e-253 880.2 701 67.6
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.8e-253 879.4 768 62.5
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 2.6e-252 875.5 740 62.4
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 3.1e-250 868.6 744 62.1
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 1.1e-247 860.1 750 62.7
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 1.6e-246 856.3 715 65.5
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 4.7e-246 854.7 653 69.1
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 1.2e-244 850.1 747 62.5
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 9.1e-242 840.5 656 67.8
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 2.3e-240 835.9 706 63.5
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 2.0e-236 822.8 655 68.9
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 5.0e-232 808.1 697 62.8
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 7.0e-226 787.7 830 53.1
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 3.4e-212 742.3 745 54.1
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.6e-206 723.4 699 58.1
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 4.0e-205 718.8 748 53.9
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.6e-196 689.5 538 67.8
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 9.9e-196 687.6 553 67.3
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 3.6e-190 669.1 424 80.7
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.6e-185 652.1 563 63.4
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 2.7e-177 626.3 605 57.7
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 5.1e-176 622.1 617 57.7
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 5.5e-154 548.9 524 59.0
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 7.4e-151 538.5 622 48.4
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 3.5e-140 503.1 441 61.5
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 5.7e-135 485.7 462 58.4
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 9.4e-130 468.4 441 58.5
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 2.0e-124 450.7 446 58.3
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.9e-122 444.1 413 57.9
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 4.7e-105 386.3 429 49.4
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 3.1e-104 383.6 428 49.5
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 4.9e-102 376.3 222 84.2
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.1e-100 370.9 398 52.8
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 1.8e-96 357.8 267 71.5
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 6.8e-96 355.9 370 54.3
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.2e-95 355.1 476 46.4
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.9e-94 350.5 370 53.8
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 3.2e-93 347.1 218 79.8
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 4.6e-84 316.6 231 72.7
Zm00001eb124970 Zea mays HOM05D004674 ORTHO05D007261 1.9e-66 258.1 163 77.9
Zm00001eb098830 Zea mays HOM05D004674 ORTHO05D007261 5.3e-64 250.0 168 72.0
vmacro19462 Vaccinium macrocarpon HOM05D004674 ORTHO05D007261 2.8e-57 227.6 139 84.2
TAR376G0549 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.3e-51 208.0 131 80.2
Atru.chr3.653 Acer truncatum HOM05D004674 ORTHO05D007261 6.7e-43 179.9 97 86.6
Psat4g095680 Pisum sativum HOM05D004674 ORTHO05D007261 6.7e-43 179.9 105 86.7
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 1.7e-41 175.3 159 57.2
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 1.5e-39 168.7 141 61.0
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 1.7e-38 165.2 174 50.0
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 3.7e-33 147.5 231 43.7
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 1.0e-30 139.4 92 72.8
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 3.2e-29 134.4 86 75.6
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 1.4e-27 129.0 227 37.4
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 6.7e-27 126.7 122 54.9
Psat2g002040 Pisum sativum HOM05D004674 ORTHO05D327579 7.7e-23 113.2 132 50.0
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 5.0e-22 110.5 115 57.4
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 5.2e-19 100.5 71 67.6
Zm00001eb334700 Zea mays HOM05D004674 ORTHO05D007261 5.2e-19 100.5 71 69.0
FAN23G1600 Fragaria x ananassa HOM05D004674 ORTHO05D045629 6.8e-19 100.1 184 35.9
MD02G1142900 Malus domestica HOM05D004674 ORTHO05D007261 3.7e-17 94.4 138 44.2
HanXRQChr08g0221331 Helianthus annuus HOM05D004674 ORTHO05D021509 8.3e-17 93.2 53 86.8
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 6.5e-14 83.6 145 39.3
FAN14G4531 Fragaria x ananassa HOM05D004674 ORTHO05D020551 8.5e-14 83.2 71 64.8
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 1.9e-13 82.0 55 76.4
Sabra05G0098800 Salix brachista HOM05D004674 ORTHO05D349121 2.8e-09 68.2 54 68.5
MELO3C028160.2 Cucumis melo HOM05D004674 ORTHO05D029175 1.1e-08 66.2 36 88.9
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 1.8e-08 65.5 51 56.9
ECA234G1590 Erigeron canadensis HOM05D004674 ORTHO05D187700 2.3e-06 58.5 68 47.1
MELO3C001880.2 Cucumis melo HOM05D004674 ORTHO05D029175 3.8e-06 57.8 29 96.6
MELO3C028263.2 Cucumis melo HOM05D004674 ORTHO05D029175 3.8e-06 57.8 29 96.6
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 5.0e-06 57.4 60 53.3


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