Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 7.8e-166 587.0 293 100.0
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 3.2e-151 538.5 293 91.1
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.1e-148 530.0 293 89.8
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.1e-148 530.0 293 89.8
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 2.8e-147 525.4 293 89.4
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 8.4e-144 513.8 290 87.6
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.1e-143 513.5 328 80.5
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 1.6e-142 509.6 289 86.2
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 2.1e-142 509.2 291 85.9
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 2.1e-142 509.2 290 85.9
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 4.6e-142 508.1 292 86.0
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 6.0e-142 507.7 290 84.8
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 7.9e-142 507.3 290 84.8
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 1.0e-141 506.9 289 85.5
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.9e-141 505.0 291 84.9
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 5.1e-141 504.6 289 85.5
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 1.1e-140 503.4 293 84.0
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.5e-140 503.1 292 85.3
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 7.4e-140 500.7 291 84.9
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 9.7e-140 500.4 289 84.4
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.3e-139 500.0 287 86.1
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.6e-139 499.6 289 84.4
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.6e-139 499.6 292 83.6
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 2.8e-139 498.8 293 83.6
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.8e-139 498.8 287 85.0
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 3.7e-139 498.4 291 84.5
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 4.8e-139 498.0 289 84.4
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 4.8e-139 498.0 293 83.6
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 6.3e-139 497.7 293 82.9
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 6.3e-139 497.7 293 82.9
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 6.3e-139 497.7 289 84.8
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 1.4e-138 496.5 301 82.4
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.8e-138 496.1 293 82.6
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 1.8e-138 496.1 284 86.6
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 1.8e-138 496.1 287 85.4
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 4.1e-138 495.0 292 83.9
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 6.9e-138 494.2 289 85.5
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.2e-137 493.4 293 82.3
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 2.0e-137 492.7 289 83.0
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 3.4e-137 491.9 291 82.8
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 3.4e-137 491.9 292 83.9
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 4.5e-137 491.5 290 83.4
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 4.5e-137 491.5 287 84.0
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 1.7e-136 489.6 292 81.8
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 1.7e-136 489.6 291 83.2
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.7e-136 489.6 292 81.8
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 1.7e-136 489.6 290 83.1
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 2.2e-136 489.2 292 81.8
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 2.2e-136 489.2 290 83.8
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 2.9e-136 488.8 292 82.5
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 3.8e-136 488.4 293 81.2
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 1.1e-135 486.9 289 82.7
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.1e-135 486.9 290 82.8
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 1.9e-135 486.1 291 82.1
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.5e-135 485.7 289 83.7
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 3.2e-135 485.3 293 80.5
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 7.2e-135 484.2 291 81.8
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 9.4e-135 483.8 288 83.0
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 1.2e-134 483.4 292 80.8
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.7e-134 482.3 292 80.8
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 2.7e-134 482.3 292 80.1
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 3.6e-134 481.9 293 80.2
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 6.1e-134 481.1 289 82.7
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 1.0e-133 480.3 287 81.5
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.4e-133 479.9 293 80.9
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 1.8e-133 479.6 292 79.8
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 1.8e-133 479.6 292 79.8
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 1.8e-133 479.6 292 79.8
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.8e-133 479.6 291 81.4
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 3.0e-133 478.8 292 79.8
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 3.0e-133 478.8 292 79.8
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 3.9e-133 478.4 292 79.8
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 5.1e-133 478.0 291 80.4
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 5.1e-133 478.0 291 80.4
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 5.1e-133 478.0 291 80.4
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 6.7e-133 477.6 292 80.5
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 6.7e-133 477.6 289 81.0
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 8.8e-133 477.2 292 81.5
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.1e-132 476.9 289 81.7
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 2.0e-132 476.1 291 80.1
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 2.5e-132 475.7 289 79.6
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 2.5e-132 475.7 291 80.4
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 2.5e-132 475.7 289 81.0
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 3.3e-132 475.3 292 78.8
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 5.7e-132 474.6 291 80.8
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 5.7e-132 474.6 291 81.8
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 7.4e-132 474.2 291 80.8
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 2.2e-131 472.6 292 79.1
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 2.2e-131 472.6 292 79.8
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 80.6
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 3.7e-131 471.9 292 79.1
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 3.7e-131 471.9 292 81.2
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 4.8e-131 471.5 292 79.1
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 8.2e-131 470.7 292 78.8
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 8.2e-131 470.7 289 78.5
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 1.1e-130 470.3 292 78.8
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 2.0e-129 466.1 289 77.5
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 77.5
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 2.6e-129 465.7 301 77.4
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 3.4e-129 465.3 287 79.1
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 3.4e-129 465.3 290 79.3
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 7.7e-129 464.2 291 80.8
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 3.8e-128 461.8 306 76.5
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 6.5e-128 461.1 287 79.1
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 1.1e-127 460.3 287 78.0
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 1.4e-127 459.9 293 78.5
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 1.9e-127 459.5 284 77.5
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 2.5e-127 459.1 289 77.9
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 4.2e-127 458.4 303 76.6
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 4.2e-127 458.4 289 77.9
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 7.2e-127 457.6 284 77.8
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 7.2e-127 457.6 290 79.0
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 3.9e-125 451.8 287 76.7
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 8.8e-125 450.7 284 75.7
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 1.1e-124 450.3 309 73.8
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.7e-123 446.4 291 79.0
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.7e-123 445.3 292 76.7
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 4.8e-123 444.9 260 84.2
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 7.0e-122 441.0 291 75.9
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 1.2e-121 440.3 293 76.5
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.5e-121 439.9 292 76.0
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 2.0e-121 439.5 447 55.7
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 3.5e-121 438.7 292 75.0
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 1.3e-120 436.8 302 74.5
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 1.4e-119 433.3 274 78.8
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 3.2e-119 432.2 292 72.9
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 1.0e-117 427.2 284 73.9
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.3e-117 426.0 294 72.1
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 3.0e-117 425.6 311 71.1
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 3.9e-117 425.2 294 72.1
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 5.2e-117 424.9 293 72.4
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 2.0e-116 422.9 286 73.4
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.0e-112 410.6 289 67.8
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 3.8e-112 408.7 231 85.7
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 8.5e-112 407.5 257 78.2
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.1e-111 407.1 289 67.1
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 1.5e-111 406.8 253 77.5
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 7.2e-111 404.4 289 66.8
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 6.1e-110 401.4 295 68.1
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 1.0e-109 400.6 287 65.9
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.0e-109 400.6 298 67.8
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 2.6e-108 396.0 232 82.3
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.5e-103 380.2 231 79.2
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.8e-101 373.2 297 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 1.2e-97 360.5 289 61.6
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 4.4e-92 342.0 204 83.3
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 1.8e-85 320.1 285 58.2
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.4e-82 310.5 270 63.3
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 1.1e-74 284.3 287 50.2
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 7.8e-73 278.1 284 48.9
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 2.3e-72 276.6 289 50.2
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 1.6e-70 270.4 281 48.8
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 9.9e-68 261.2 163 76.7
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 1.0e-56 224.6 154 70.8
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 1.7e-56 223.8 151 76.8
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 5.6e-55 218.8 113 93.8
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.1e-50 204.5 127 78.7
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 2.7e-25 120.2 82 73.2
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 2.3e-24 117.1 125 51.2
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 3.0e-24 116.7 163 42.3
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.4e-21 107.8 93 61.3
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 6.9e-21 105.5 66 77.3
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 2.0e-20 104.0 96 58.3
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 3.4e-20 103.2 75 70.7
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 5.9e-20 102.4 70 74.3
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 3.8e-19 99.8 52 88.5
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.1e-18 98.2 93 57.0
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 2.5e-18 97.1 57 82.5
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.1e-15 88.2 90 52.2
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 1.3e-14 84.7 58 72.4
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 1.3e-14 84.7 58 72.4
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.8e-08 64.3 54 63.0
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 6.7e-08 62.4 41 65.9
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 6.7e-08 62.4 96 44.8
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 2.8e-06 57.0 60 51.7


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