Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6166 Avicennia marina HOM05D000966 ORTHO05D002384 3.0e-181 638.3 300 100.0
SGA_v2.0_scaffold265G46072 Striga asiatica HOM05D000966 ORTHO05D002384 2.4e-53 213.4 288 45.1
PGSC0003DMG401011157 Solanum tuberosum HOM05D000966 ORTHO05D002384 8.9e-48 194.9 134 59.0
Sopen07g002180 Solanum pennellii HOM05D000966 ORTHO05D002384 2.6e-47 193.4 134 58.2
CSS0008046 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 3.4e-47 193.0 132 62.1
Dinv41333 Davidia involucrata HOM05D000966 ORTHO05D002384 3.4e-47 193.0 132 59.8
Solyc07g006050.3 Solanum lycopersicum HOM05D000966 ORTHO05D002384 3.4e-47 193.0 134 59.0
CAN.G1190.17 Capsicum annuum HOM05D000966 ORTHO05D002384 2.2e-46 190.3 134 57.5
CSS0013550 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 2.9e-46 189.9 132 61.4
Cfa020771 Carpinus fangiana HOM05D000966 ORTHO05D002384 6.4e-46 188.7 267 42.3
Oeu010275.1 Olea europaea HOM05D000966 ORTHO05D002384 1.6e-44 184.1 264 43.6
Ciclev10008144m.g Citrus clementina HOM05D000966 ORTHO05D002384 3.5e-44 183.0 148 50.7
QL02p094348 Quercus lobata HOM05D000966 ORTHO05D002384 2.3e-43 180.3 262 38.9
Aa31LG2G19520 Aethionema arabicum HOM05D000966 ORTHO05D002384 5.0e-43 179.1 132 56.1
CARHR238730 Cardamine hirsuta HOM05D000966 ORTHO05D002384 8.6e-43 178.3 199 43.2
Thhalv10025007m.g Eutrema salsugineum HOM05D000966 ORTHO05D002384 3.3e-42 176.4 132 53.0
Prupe.1G101500 Prunus persica HOM05D000966 ORTHO05D002384 7.3e-42 175.3 136 52.9
Nn8g40137 Nelumbo nucifera HOM05D000966 ORTHO05D002384 9.5e-42 174.9 139 54.7
AT4G30860 Arabidopsis thaliana HOM05D000966 ORTHO05D002384 1.6e-41 174.1 132 53.8
A08p19050 Brassica napus HOM05D000966 ORTHO05D002384 1.6e-41 174.1 132 53.0
CiPaw.15G163700 Carya illinoinensis HOM05D000966 ORTHO05D002384 1.6e-41 174.1 139 50.4
COL.COLO4_36568 Corchorus olitorius HOM05D000966 ORTHO05D002384 3.6e-41 172.9 139 50.4
AL7G21250 Arabidopsis lyrata HOM05D000966 ORTHO05D002384 4.7e-41 172.6 132 53.0
BraA08t33866Z Brassica rapa HOM05D000966 ORTHO05D002384 4.7e-41 172.6 132 51.5
BcaC01g01135 Brassica carinata HOM05D000966 ORTHO05D002384 6.2e-41 172.2 132 52.3
BolC3t21156H Brassica oleracea HOM05D000966 ORTHO05D002384 6.2e-41 172.2 132 52.3
ClCG06G012700 Citrullus lanatus HOM05D000966 ORTHO05D002384 8.1e-41 171.8 130 55.4
Manes.14G113800 Manihot esculenta HOM05D000966 ORTHO05D002384 8.1e-41 171.8 140 50.0
BcaB03g12663 Brassica carinata HOM05D000966 ORTHO05D002384 1.1e-40 171.4 133 52.6
Duzib168G1082 Durio zibethinus HOM05D000966 ORTHO05D002384 1.1e-40 171.4 156 48.1
Gohir.A13G206300 Gossypium hirsutum HOM05D000966 ORTHO05D002384 1.1e-40 171.4 184 44.0
Thecc.09G154800 Theobroma cacao HOM05D000966 ORTHO05D002384 1.1e-40 171.4 157 46.5
THA.LOC104819902 Tarenaya hassleriana HOM05D000966 ORTHO05D002384 1.4e-40 171.0 139 52.5
C03p88480 Brassica napus HOM05D000966 ORTHO05D002384 1.8e-40 170.6 132 53.0
Gohir.D13G210900 Gossypium hirsutum HOM05D000966 ORTHO05D002384 1.8e-40 170.6 184 44.0
Sc14g0001010 Simmondsia chinensis HOM05D000966 ORTHO05D002384 2.3e-40 170.2 128 58.6
Atru.chr7.388 Acer truncatum HOM05D000966 ORTHO05D002384 5.2e-40 169.1 127 54.3
MELO3C010193.2 Cucumis melo HOM05D000966 ORTHO05D002384 5.2e-40 169.1 130 52.3
FAN07G0432 Fragaria x ananassa HOM05D000966 ORTHO05D002384 5.2e-40 169.1 128 54.7
Gorai.013G240900 Gossypium raimondii HOM05D000966 ORTHO05D002384 5.2e-40 169.1 139 49.6
CsaV3_1G029250 Cucumis sativus L. HOM05D000966 ORTHO05D002384 8.9e-40 168.3 130 52.3
Sp7g28740 Schrenkiella parvula HOM05D000966 ORTHO05D002384 1.2e-39 167.9 133 52.6
MD16G1258900 Malus domestica HOM05D000966 ORTHO05D002384 2.6e-39 166.8 135 51.9
Sed0005530 Sechium edule HOM05D000966 ORTHO05D002384 2.6e-39 166.8 262 38.2
vmacro13070 Vaccinium macrocarpon HOM05D000966 ORTHO05D002384 2.6e-39 166.8 129 51.9
Carub.0007s0969 Capsella rubella HOM05D000966 ORTHO05D002384 4.4e-39 166.0 132 51.5
EL10Ac8g18900 Beta vulgaris HOM05D000966 ORTHO05D002384 7.5e-39 165.2 128 51.6
PSO063G2137 Papaver somniferum HOM05D000966 ORTHO05D002384 9.8e-39 164.9 271 36.5
FvH4_4g08820 Fragaria vesca HOM05D000966 ORTHO05D002384 1.3e-38 164.5 128 52.3
FAN12G1904 Fragaria x ananassa HOM05D000966 ORTHO05D002384 1.3e-38 164.5 128 52.3
MBI15_g07483_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D002384 2.2e-38 163.7 132 48.5
Cc06_g14440 Coffea canephora HOM05D000966 ORTHO05D002384 2.9e-38 163.3 159 46.5
GSVIVG01023699001 Vitis vinifera HOM05D000966 ORTHO05D002384 2.9e-38 163.3 266 36.8
HanXRQChr03g0066001 Helianthus annuus HOM05D000966 ORTHO05D002384 3.7e-38 162.9 129 52.7
Aqoxy7G03278 Aquilegia oxysepala HOM05D000966 ORTHO05D002384 4.9e-38 162.5 134 50.7
Lalb_Chr11g0072461 Lupinus albus HOM05D000966 ORTHO05D002384 4.9e-38 162.5 195 43.6
ATR0580G159 Amborella trichopoda HOM05D000966 ORTHO05D002384 6.4e-38 162.2 147 46.9
PSO782G3854 Papaver somniferum HOM05D000966 ORTHO05D002384 6.4e-38 162.2 133 52.6
RcHm_v2.0_Chr4g0405361 Rosa chinensis HOM05D000966 ORTHO05D002384 6.4e-38 162.2 128 51.6
Lsat_1_v5_gn_7_50901 Lactuca sativa HOM05D000966 ORTHO05D002384 1.4e-37 161.0 124 55.6
Ah.09g228570 Amaranthus hybridus HOM05D000966 ORTHO05D002384 2.4e-37 160.2 169 43.2
Potri.018G102100 Populus trichocarpa HOM05D000966 ORTHO05D002384 3.2e-37 159.8 141 46.8
CANSAT11G0969 Cannabis sativa HOM05D000966 ORTHO05D002384 4.1e-37 159.5 141 49.6
FAN17G0011 Fragaria x ananassa HOM05D000966 ORTHO05D002384 5.4e-37 159.1 128 51.6
Eucgr.C01233 Eucalyptus grandis HOM05D000966 ORTHO05D002384 7.1e-37 158.7 156 42.3
Os02g0611300 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D002384 1.6e-36 157.5 147 46.3
AUR62028372 Chenopodium quinoa HOM05D000966 ORTHO05D002384 2.1e-36 157.1 122 48.4
Zm00001eb184480 Zea mays HOM05D000966 ORTHO05D002384 1.3e-35 154.5 150 46.0
TWI32G0919 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 3.0e-35 153.3 152 45.4
Hma1.2p1_0028F.1_g017810 Hydrangea macrophylla HOM05D000966 ORTHO05D002384 3.9e-35 152.9 132 52.3
arahy.Tifrunner.gnm1.ann1.BQLE9W Arachis hypogaea HOM05D000966 ORTHO05D002384 6.6e-35 152.1 157 45.2
DCAR_014798 Daucus carota HOM05D000966 ORTHO05D002384 1.9e-34 150.6 268 36.2
PGR102G3031 Punica granatum HOM05D000966 ORTHO05D002384 2.5e-34 150.2 151 45.7
Phvul.001G083533 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 4.3e-34 149.4 138 50.7
Phvul.001G083666 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 4.3e-34 149.4 138 50.7
Phvul.009G195400 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 5.6e-34 149.1 138 50.0
CDE02G0098 Ceratophyllum demersum HOM05D000966 ORTHO05D002384 7.3e-34 148.7 117 51.3
TWI34G0436 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 2.8e-33 146.7 128 46.1
Cpa.g.sc199.9 Carica papaya HOM05D000966 ORTHO05D002384 3.6e-33 146.4 116 52.6
ECA240G3489 Erigeron canadensis HOM05D000966 ORTHO05D002384 3.6e-33 146.4 175 41.7
Lj6g0021714 Lotus japonicus HOM05D000966 ORTHO05D002384 3.6e-33 146.4 114 53.5
HanXRQChr12g0357821 Helianthus annuus HOM05D000966 ORTHO05D002384 4.7e-33 146.0 130 49.2
TAR383G0488 Trochodendron aralioides HOM05D000966 ORTHO05D002384 1.1e-32 144.8 104 53.8
VMungo1309G2426 Vigna mungo HOM05D000966 ORTHO05D002384 8.9e-32 141.7 138 48.6
TPR.G14496 Trifolium pratense HOM05D000966 ORTHO05D002384 1.2e-31 141.4 122 54.1
Psat1g023240 Pisum sativum HOM05D000966 ORTHO05D002384 2.0e-31 140.6 114 54.4
arahy.Tifrunner.gnm1.ann1.XD33H1 Arachis hypogaea HOM05D000966 ORTHO05D002384 2.2e-30 137.1 156 42.9
Sabra18G0087800 Salix brachista HOM05D000966 ORTHO05D002384 1.9e-29 134.0 187 34.2
ECA240G2206 Erigeron canadensis HOM05D000966 ORTHO05D002384 3.2e-29 133.3 128 43.8
DCAR_017928 Daucus carota HOM05D000966 ORTHO05D002384 5.4e-29 132.5 100 54.0
Lj9C723G5 Lonicera japonica HOM05D000966 ORTHO05D002384 9.2e-29 131.7 189 37.6
Glyma.06G223300 Glycine max HOM05D000966 ORTHO05D002384 1.6e-28 131.0 114 50.0
Nitab4.5_0002809g0080 Nicotiana tabacum HOM05D000966 ORTHO05D002384 1.6e-28 131.0 132 44.7
SEGI_18174 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 3.5e-28 129.8 134 38.8
Duzib187G0743 Durio zibethinus HOM05D000966 ORTHO05D002384 2.3e-27 127.1 120 45.8
Medtr0071s0100 Medicago truncatula HOM05D000966 ORTHO05D002384 2.5e-26 123.6 96 50.0
HanXRQChr12g0357931 Helianthus annuus HOM05D000966 ORTHO05D002384 7.3e-26 122.1 98 52.0
Nitab4.5_0001036g0020 Nicotiana tabacum HOM05D000966 ORTHO05D002384 2.0e-23 114.0 198 33.8
SHI02830 Sapria himalayana HOM05D000966 ORTHO05D002384 1.1e-21 108.2 115 41.7
Actinidia33610 Actinidia chinensis HOM05D000966 ORTHO05D002384 1.6e-20 104.4 79 57.0
Rhsim01G0021300 Rhododendron simsii HOM05D000966 ORTHO05D002384 3.3e-18 96.7 132 36.4
Haze_19110 Corylus avellana HOM05D000966 ORTHO05D002384 2.1e-17 94.0 200 36.0
Mapoly0045s0061 Marchantia polymorpha HOM05D000966 ORTHO05D002384 2.6e-15 87.0 103 36.9
Pp3c2_35860 Physcomitrium patens HOM05D000966 ORTHO05D002384 4.2e-13 79.7 105 34.3
SEGI_23432 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 2.1e-09 67.4 90 34.4
AagrBONN_evm.TU.Sc2ySwM_344.5298 Anthoceros agrestis HOM05D000966 ORTHO05D002384 1.8e-08 64.3 113 31.9
Glyma.18G302200 Glycine max HOM05D000966 ORTHO05D002384 2.0e-07 60.8 60 41.7
DCAR_017926 Daucus carota HOM05D000966 ORTHO05D002384 4.5e-07 59.7 50 50.0
Glyma.08G000100 Glycine max HOM05D000142 ORTHO05D000124 5.8e-07 59.3 65 43.1
AUR62025379 Chenopodium quinoa HOM05D000966 ORTHO05D002384 1.7e-06 57.8 128 23.4


User provided reference genes

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