Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 1.9e-181 639.0 321 100.0
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 1.1e-136 490.3 323 79.3
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 2.3e-134 482.6 324 79.9
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 3.3e-133 478.8 324 74.4
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 4.3e-133 478.4 323 75.9
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 2.4e-131 472.6 323 73.4
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 2.6e-130 469.2 323 73.4
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 4.5e-130 468.4 323 73.4
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 6.4e-129 464.5 323 72.4
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 3.5e-127 458.8 323 71.8
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 4.6e-127 458.4 321 71.0
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 1.0e-126 457.2 300 76.3
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 1.9e-125 453.0 323 70.6
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 2.5e-125 452.6 312 72.4
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 4.3e-125 451.8 321 71.0
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 5.6e-125 451.4 324 71.9
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 9.6e-125 450.7 324 70.7
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 1.6e-124 449.9 299 76.9
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 6.2e-124 448.0 327 69.4
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 6.2e-124 448.0 322 69.9
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.1e-123 447.2 308 72.7
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 1.8e-123 446.4 324 70.4
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 4.0e-123 445.3 312 71.2
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 1.2e-122 443.7 321 69.8
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 1.5e-122 443.4 329 69.9
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 5.8e-122 441.4 322 70.8
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 1.7e-121 439.9 323 68.4
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 6.4e-121 438.0 322 70.8
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 3.2e-120 435.6 324 67.9
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.2e-120 435.6 318 70.8
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 1.2e-119 433.7 327 69.7
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 2.1e-119 433.0 324 67.9
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 2.1e-119 433.0 307 71.0
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 4.6e-119 431.8 322 67.7
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 1.8e-118 429.9 322 68.9
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 3.0e-118 429.1 322 66.5
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 3.0e-118 429.1 322 66.5
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 3.0e-118 429.1 319 66.5
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 3.9e-118 428.7 323 69.0
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 8.7e-118 427.6 322 67.7
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 1.1e-117 427.2 302 69.9
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 1.9e-117 426.4 309 69.6
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 1.9e-117 426.4 323 67.5
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 7.4e-117 424.5 321 66.7
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 1.6e-116 423.3 363 61.7
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 2.1e-116 422.9 323 67.8
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 2.1e-116 422.9 323 66.9
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 2.8e-116 422.5 322 65.2
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 8.2e-116 421.0 320 66.6
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 1.1e-115 420.6 322 66.8
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 6.9e-115 417.9 318 68.9
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 2.0e-114 416.4 298 70.8
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 1.0e-113 414.1 323 65.6
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.7e-113 413.3 320 64.7
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 8.4e-113 411.0 322 65.8
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 5.5e-112 408.3 325 65.8
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 1.6e-111 406.8 319 66.1
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 2.1e-111 406.4 309 67.6
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 2.1e-111 406.4 337 64.7
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 4.6e-111 405.2 316 68.4
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 1.3e-110 403.7 295 68.8
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 3.9e-110 402.1 319 64.6
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 3.9e-110 402.1 315 65.7
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 1.1e-109 400.6 320 64.1
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 1.9e-109 399.8 319 63.6
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 4.3e-109 398.7 306 67.0
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 5.7e-109 398.3 302 67.2
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 5.7e-109 398.3 322 64.3
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.3e-108 397.1 339 61.9
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 2.8e-108 396.0 300 67.7
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 4.8e-108 395.2 304 66.4
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 4.8e-108 395.2 310 64.8
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 1.1e-107 394.0 300 65.7
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 1.8e-107 393.3 329 61.1
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 3.1e-107 392.5 300 66.7
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 6.9e-107 391.3 320 63.1
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 1.2e-106 390.6 303 66.0
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.2e-106 390.6 295 69.2
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 1.5e-106 390.2 300 65.3
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 1.0e-105 387.5 300 66.0
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.3e-105 387.1 288 69.1
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 1.7e-105 386.7 300 66.3
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 2.9e-105 386.0 300 67.0
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 2.5e-104 382.9 297 67.3
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 7.2e-104 381.3 289 66.8
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 9.4e-104 380.9 295 64.4
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 3.6e-103 379.0 323 60.7
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 1.0e-102 377.5 305 64.3
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 3.9e-102 375.6 309 63.8
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 3.9e-102 375.6 341 59.5
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 5.1e-102 375.2 302 62.9
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 9.7e-101 370.9 275 68.4
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 2.4e-99 366.3 319 61.4
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 6.9e-99 364.8 372 52.7
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 1.7e-97 360.1 320 60.0
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 8.5e-97 357.8 319 59.9
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 2.1e-95 353.2 343 54.5
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 2.0e-93 346.7 292 63.7
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.7e-92 343.6 344 57.3
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 7.0e-91 338.2 343 56.9
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.4e-86 323.9 323 55.4
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.2e-81 306.6 221 74.2
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 7.2e-80 301.6 243 64.6
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 1.2e-79 300.8 223 70.0
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 7.0e-75 285.0 326 48.8
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 2.0e-69 266.9 227 64.3
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 2.6e-69 266.5 195 71.8
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 3.1e-67 259.6 298 48.0
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 6.1e-63 245.4 227 59.5
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 1.8e-62 243.8 337 44.2
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 3.5e-58 229.6 360 41.1
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 5.6e-56 222.2 153 70.6
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 7.8e-50 201.8 204 55.9
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 4.9e-36 156.0 115 64.3
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 6.8e-30 135.6 287 34.5
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 6.4e-28 129.0 137 53.3
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.2e-27 126.7 136 52.9
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 7.1e-27 125.6 79 74.7
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 7.1e-27 125.6 79 74.7
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 2.1e-26 124.0 345 29.6
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 1.3e-25 121.3 174 47.1
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 3.6e-23 113.2 340 30.3
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 2.9e-20 103.6 81 67.9
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 6.4e-20 102.4 81 66.7
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 6.4e-20 102.4 81 66.7
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 3.2e-19 100.1 78 67.9
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 4.2e-19 99.8 68 67.6
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 2.7e-18 97.1 91 58.2
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 4.3e-16 89.7 83 60.2
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 9.0e-14 82.0 52 67.3
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.3e-12 78.2 43 79.1
PRCOL_00002868 Prasinoderma coloniale HOM05D004630 ORTHO05D005727 8.4e-12 75.5 294 25.2
Potri.003G027722 Populus trichocarpa HOM05D005445 ORTHO05D007043 2.4e-11 73.9 64 57.8
Potri.003G027520 Populus trichocarpa HOM05D005445 ORTHO05D007043 9.0e-06 55.5 47 66.0


User provided reference genes

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