Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19710 Avicennia marina HOM05D002728 ORTHO05D002874 1.1e-62 243.0 121 100.0
MSTRG.6224 Avicennia marina HOM05D002728 ORTHO05D002874 4.4e-22 108.2 189 40.2
Migut.J01489 Erythranthe guttata HOM05D002728 ORTHO05D002874 3.9e-18 95.1 183 39.9
SGA_v2.0_scaffold66G22411 Striga asiatica HOM05D002728 ORTHO05D002874 3.3e-17 92.0 185 37.3
MSTRG.6145 Avicennia marina HOM05D002728 ORTHO05D002874 8.1e-16 87.4 139 39.6
Oeu009852.1 Olea europaea HOM05D002728 ORTHO05D002874 1.1e-15 87.0 185 36.2
SalBow6G5526 Salvia bowleyana HOM05D002728 ORTHO05D002874 9.8e-14 80.5 182 34.6
Dinv41242 Davidia involucrata HOM05D002728 ORTHO05D002874 8.3e-13 77.4 173 34.7
Dinv42718 Davidia involucrata HOM05D002728 ORTHO05D002874 1.9e-12 76.3 167 34.1
Dinv43383 Davidia involucrata HOM05D002728 ORTHO05D002874 1.9e-12 76.3 167 34.1
MSTRG.19298 Avicennia marina HOM05D002728 ORTHO05D002874 2.7e-11 72.4 166 32.5
unitig_0.g575 Utricularia gibba HOM05D002728 ORTHO05D002874 2.7e-11 72.4 139 38.1
Peaxi162Scf00211g00232 Petunia axillaris HOM05D002728 ORTHO05D002874 3.5e-11 72.0 156 33.3
SGA_v2.0_scaffold13G06659 Striga asiatica HOM05D002728 ORTHO05D002874 4.6e-11 71.6 168 31.5
Migut.J00687 Erythranthe guttata HOM05D002728 ORTHO05D002874 6.0e-11 71.2 168 32.1
arahy.Tifrunner.gnm1.ann1.R81B49 Arachis hypogaea HOM05D002728 ORTHO05D002874 1.0e-10 70.5 159 32.7
Glyma.13G096800 Glycine max HOM05D002728 ORTHO05D002874 1.0e-10 70.5 103 40.8
CSS0050130 Camellia sinensis var. sinensis HOM05D002728 ORTHO05D002874 1.3e-10 70.1 185 30.3
arahy.Tifrunner.gnm1.ann1.CG00YF Arachis hypogaea HOM05D002728 ORTHO05D002874 3.0e-10 68.9 159 32.1
Sed0008387 Sechium edule HOM05D002728 ORTHO05D002874 3.0e-10 68.9 175 30.9
unitig_22.g5140 Utricularia gibba HOM05D002728 ORTHO05D002874 3.9e-10 68.6 189 29.1
EL10Ac8g18289 Beta vulgaris HOM05D002728 ORTHO05D002874 6.6e-10 67.8 159 33.3
CsaV3_1G031640 Cucumis sativus L. HOM05D002728 ORTHO05D002874 6.6e-10 67.8 174 31.6
Cc06_g06720 Coffea canephora HOM05D002728 ORTHO05D002874 8.6e-10 67.4 191 30.9
GSVIVG01029218001 Vitis vinifera HOM05D002728 ORTHO05D002874 8.6e-10 67.4 167 31.1
Hma1.2p1_0155F.1_g068590 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 1.1e-09 67.0 69 55.1
Solyc10g081830.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 1.5e-09 66.6 75 52.0
Sopen10g032350 Solanum pennellii HOM05D002728 ORTHO05D002874 1.5e-09 66.6 182 31.9
Eucgr.C02332 Eucalyptus grandis HOM05D002728 ORTHO05D002874 1.9e-09 66.2 176 32.4
Manes.03G002500 Manihot esculenta HOM05D002728 ORTHO05D002874 1.9e-09 66.2 73 53.4
Peaxi162Scf00083g01924 Petunia axillaris HOM05D002728 ORTHO05D002874 1.9e-09 66.2 189 29.1
Sc08g0005300 Simmondsia chinensis HOM05D002728 ORTHO05D002874 1.9e-09 66.2 176 33.5
PGSC0003DMG400028143 Solanum tuberosum HOM05D002728 ORTHO05D002874 1.9e-09 66.2 75 50.7
Nitab4.5_0005257g0030 Nicotiana tabacum HOM05D002728 ORTHO05D002874 3.3e-09 65.5 187 29.9
CiPaw.07G192700 Carya illinoinensis HOM05D002728 ORTHO05D002874 4.3e-09 65.1 167 30.5
Nn8g38588 Nelumbo nucifera HOM05D002728 ORTHO05D002874 4.3e-09 65.1 168 31.0
Nitab4.5_0002165g0040 Nicotiana tabacum HOM05D002728 ORTHO05D002874 7.3e-09 64.3 187 29.4
PGR044G1401 Punica granatum HOM05D002728 ORTHO05D002874 9.5e-09 63.9 168 30.4
QL12p024865 Quercus lobata HOM05D002728 ORTHO05D002874 9.5e-09 63.9 71 50.7
VMungo1215G1050 Vigna mungo HOM05D002728 ORTHO05D002874 1.2e-08 63.5 184 27.2
PGSC0003DMG403013782 Solanum tuberosum HOM05D002728 ORTHO05D002874 2.8e-08 62.4 181 29.8
vmacro06011 Vaccinium macrocarpon HOM05D002728 ORTHO05D002874 2.8e-08 62.4 161 29.2
Aqoxy7G03019 Aquilegia oxysepala HOM05D002728 ORTHO05D002874 3.6e-08 62.0 179 29.1
Dinv09620 Davidia involucrata HOM05D002728 ORTHO05D002874 3.6e-08 62.0 70 54.3
Nitab4.5_0006838g0010 Nicotiana tabacum HOM05D002728 ORTHO05D002874 3.6e-08 62.0 171 28.7
vmacro14225 Vaccinium macrocarpon HOM05D002728 ORTHO05D002874 6.2e-08 61.2 72 50.0
Actinidia17316 Actinidia chinensis HOM05D002728 ORTHO05D002874 8.1e-08 60.8 167 29.3
CiPaw.08G018700 Carya illinoinensis HOM05D002728 ORTHO05D002874 8.1e-08 60.8 75 49.3
Phvul.003G145200 Phaseolus vulgaris HOM05D002728 ORTHO05D002874 8.1e-08 60.8 103 39.8
Prupe.1G085000 Prunus persica HOM05D002728 ORTHO05D002874 1.1e-07 60.5 169 30.2
Ah.14g083770 Amaranthus hybridus HOM05D002728 ORTHO05D002874 1.4e-07 60.1 187 30.5
CAN.G308.33 Capsicum annuum HOM05D002728 ORTHO05D002874 1.4e-07 60.1 188 30.3
QL02p097865 Quercus lobata HOM05D002728 ORTHO05D002874 1.4e-07 60.1 167 29.3
Rhsim03G0264700 Rhododendron simsii HOM05D002728 ORTHO05D002874 1.4e-07 60.1 69 47.8
Actinidia18150 Actinidia chinensis HOM05D002728 ORTHO05D002874 1.8e-07 59.7 69 50.7
Lsat_1_v5_gn_8_67780 Lactuca sativa HOM05D002728 ORTHO05D002874 1.8e-07 59.7 194 32.5
Cfa013500 Carpinus fangiana HOM05D002728 ORTHO05D002874 2.3e-07 59.3 183 27.9
Ca_21231_v3 Cicer arietinum L. HOM05D002728 ORTHO05D002874 2.3e-07 59.3 102 38.2
ClCG06G013390 Citrullus lanatus HOM05D002728 ORTHO05D002874 2.3e-07 59.3 69 50.7
MELO3C017458.2 Cucumis melo HOM05D002728 ORTHO05D002874 2.3e-07 59.3 70 50.0
Lalb_Chr07g0180521 Lupinus albus HOM05D002728 ORTHO05D002874 2.3e-07 59.3 162 29.0
Medtr1g009890 Medicago truncatula HOM05D002728 ORTHO05D002874 2.3e-07 59.3 68 50.0
Solyc07g018300.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 2.3e-07 59.3 181 28.7
TAR626G0658 Trochodendron aralioides HOM05D002728 ORTHO05D002874 2.3e-07 59.3 70 51.4
Nitab4.5_0004944g0050 Nicotiana tabacum HOM05D002728 ORTHO05D002874 3.1e-07 58.9 171 27.5
Oeu028651.1 Olea europaea HOM05D002728 ORTHO05D002874 3.1e-07 58.9 70 48.6
Thecc.09G005900 Theobroma cacao HOM05D002728 ORTHO05D002874 3.1e-07 58.9 71 49.3
TPR.G12058 Trifolium pratense HOM05D002728 ORTHO05D002874 3.1e-07 58.9 68 50.0
TWI32G1170 Tripterygium wilfordii HOM05D002728 ORTHO05D002874 4.0e-07 58.5 70 48.6
Cc06_g13200 Coffea canephora HOM05D002728 ORTHO05D002874 5.2e-07 58.2 182 33.0
COL.COLO4_19047 Corchorus olitorius HOM05D002728 ORTHO05D002874 5.2e-07 58.2 71 49.3
Glyma.17G202200 Glycine max HOM05D002728 ORTHO05D002874 6.8e-07 57.8 71 46.5
arahy.Tifrunner.gnm1.ann1.7IT8A8 Arachis hypogaea HOM05D002728 ORTHO05D002874 8.9e-07 57.4 170 26.5
CDE10G0899 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 8.9e-07 57.4 151 30.5
HanXRQChr12g0365421 Helianthus annuus HOM05D002728 ORTHO05D002874 8.9e-07 57.4 190 30.0
Sopen07g007450 Solanum pennellii HOM05D002728 ORTHO05D002874 1.2e-06 57.0 186 29.6
arahy.Tifrunner.gnm1.ann1.59XDTJ Arachis hypogaea HOM05D002728 ORTHO05D002874 1.5e-06 56.6 170 26.5
Ca_12874_v3 Cicer arietinum L. HOM05D002728 ORTHO05D002874 1.5e-06 56.6 182 28.6
Ciclev10009139m.g Citrus clementina HOM05D002728 ORTHO05D002874 1.5e-06 56.6 71 45.1
Lj1g0002656 Lotus japonicus HOM05D002728 ORTHO05D002874 1.5e-06 56.6 74 44.6
Lj4g0022723 Lotus japonicus HOM05D002728 ORTHO05D002874 1.5e-06 56.6 172 27.3
Lalb_Chr14g0362241 Lupinus albus HOM05D002728 ORTHO05D002874 1.5e-06 56.6 73 46.6
Prupe.1G461400 Prunus persica HOM05D002728 ORTHO05D002874 1.5e-06 56.6 183 28.4
Atru.chr7.2627 Acer truncatum HOM05D002728 ORTHO05D002874 2.0e-06 56.2 72 45.8
Phvul.001G058500 Phaseolus vulgaris HOM05D002728 ORTHO05D002874 2.0e-06 56.2 71 45.1
Potri.006G275700 Populus trichocarpa HOM05D002728 ORTHO05D002874 2.0e-06 56.2 71 46.5
Sabra06G0213400 Salix brachista HOM05D002728 ORTHO05D002874 2.0e-06 56.2 71 46.5
VMungo0647G0359 Vigna mungo HOM05D002728 ORTHO05D002874 2.0e-06 56.2 71 45.1
GSVIVG01035537001 Vitis vinifera HOM05D002728 ORTHO05D002874 2.0e-06 56.2 66 56.1
Rhsim07G0137300 Rhododendron simsii HOM05D002728 ORTHO05D002874 3.4e-06 55.5 71 47.9
Lalb_Chr24g0402451 Lupinus albus HOM05D002728 ORTHO05D002874 4.4e-06 55.1 71 43.7
Actinidia14753 Actinidia chinensis HOM05D002728 ORTHO05D002874 5.8e-06 54.7 68 50.0
CDE10G0114 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 5.8e-06 54.7 71 47.9
CAN.G674.8 Capsicum annuum HOM05D002728 ORTHO05D002874 7.6e-06 54.3 157 27.4
CDE10G0012 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 7.6e-06 54.3 71 47.9
Sed0024156 Sechium edule HOM05D002728 ORTHO05D002874 7.6e-06 54.3 173 28.3


User provided reference genes

Program Settings