Gene: Nitab4.5_0004944g0050
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0004944g0050
- Transcript Identifier Nitab4.5_0004944g0050.1
- Gene Type Coding gene
- Location Nitab4.5_0004944 : 84465-90187 : negative
Gene Family Information
- ID HOM05D002728
- #Genes/#Species 253/98
- Phylogenetic origin
- ID ORTHO05D002874
- #Genes/#Species 256/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0004944g0050.1
- SR1-identifier Nta13g16240.1
Descriptions
- Description Replication protein A, C-terminal, OB-fold nucleic acid binding domain, AA-tRNA synthetase-type, Nucleic acid-binding, OB-fold, Winged helix-turn-helix DNA-binding domain, Replication protein A, subunit RPA32
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0016458 | ISO | PLAZA Integrative Orthology | gene silencing | AT2G24490 |
| GO:0000724 | ISO | PLAZA Integrative Orthology | double-strand break repair via homologous recombination | AT3G02920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G02920 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014646 | Replication factor A protein 2 |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR014892 | Replication protein A, C-terminal |
| IPR040260 | Replication factor A protein-like |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| Mapman id | Description |
|---|---|
| 13.2.3.5.2 | Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA2 |
| 13.3.5.4.4.2 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA2 |