Gene: Solyc07g018300.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g018300.3
  • Transcript Identifier Solyc07g018300.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 10124103-10129041 : negative

Gene Family Information

  • ID HOM05D002728
  • #Genes/#Species 253/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g018300.3.1
  • uniprot K4CCP1
  • gene_id Solyc07g018300

Descriptions

  • Description Replication protein A 32 kDa subunit A (AHRD V3.3 *** A0A1J3JLU8_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT2G24490
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0006289
IBA
GOA Databasenucleotide-excision repair
GO:0006260
IBA
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G02920
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0000781
IBA
GOA Databasechromosome, telomeric region
GO:0035861
IBA
GOA Databasesite of double-strand break
GO:0005662
IBA
GOA DatabaseDNA replication factor A complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014892 Replication protein A, C-terminal
IPR014646 Replication factor A protein 2
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR040260 Replication factor A protein-like
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
13.2.3.5.2 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA2
13.3.5.4.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA2