Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 4.2e-75 285.8 331 100.0
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 4.7e-50 202.6 331 81.6
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.8e-49 200.7 325 82.5
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 2.4e-46 190.3 329 83.0
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.4e-46 190.3 327 80.4
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 9.2e-46 188.3 328 81.4
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 5.9e-45 185.7 329 83.0
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 7.8e-45 185.3 321 80.4
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.3e-44 184.5 326 83.7
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.7e-44 184.1 329 83.3
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.7e-44 184.1 327 82.0
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 3.9e-44 183.0 329 69.0
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 8.6e-44 181.8 325 80.0
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 2.5e-43 180.3 326 83.4
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 3.3e-43 179.9 326 83.4
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 3.3e-43 179.9 329 82.1
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.3e-43 179.5 330 82.4
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 5.6e-43 179.1 328 81.7
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 7.3e-43 178.7 330 82.7
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 7.3e-43 178.7 327 82.3
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 7.3e-43 178.7 326 82.2
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 1.2e-42 177.9 322 81.1
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 2.8e-42 176.8 325 65.2
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 6.2e-42 175.6 324 79.9
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 6.2e-42 175.6 325 82.5
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 1.4e-41 174.5 328 81.1
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 3.1e-41 173.3 317 83.6
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 3.1e-41 173.3 328 78.7
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 8.9e-41 171.8 328 81.7
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 1.5e-40 171.0 328 81.4
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 2.0e-40 170.6 325 80.3
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.6e-40 170.2 322 80.1
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 3.4e-40 169.9 325 83.7
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 4.4e-40 169.5 328 80.5
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 4.4e-40 169.5 318 81.4
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 5.8e-40 169.1 325 79.7
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.3e-39 167.9 327 81.3
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.3e-39 167.9 327 81.3
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.7e-39 167.5 325 82.8
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 3.7e-39 166.4 325 78.5
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 4.9e-39 166.0 325 75.1
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 6.4e-39 165.6 325 79.1
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 6.4e-39 165.6 327 80.1
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 8.3e-39 165.2 319 76.8
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 1.4e-38 164.5 331 75.2
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.9e-38 164.1 328 73.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 4.1e-38 162.9 319 82.4
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 4.1e-38 162.9 327 71.6
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.1e-38 162.9 320 78.1
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 5.4e-38 162.5 326 79.4
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 5.4e-38 162.5 317 81.7
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 7.0e-38 162.2 327 71.9
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.2e-37 161.4 321 81.9
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.2e-37 161.4 315 81.6
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.7e-37 160.2 329 76.0
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 5.0e-36 156.0 329 78.7
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 6.6e-36 155.6 327 75.8
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 8.6e-36 155.2 321 76.9
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.1e-35 154.8 320 78.4
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.1e-35 154.8 320 78.4
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 1.5e-35 154.5 319 80.3
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.9e-35 154.1 320 79.1
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 2.5e-35 153.7 323 77.4
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 5.6e-35 152.5 318 79.6
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 7.3e-35 152.1 312 84.6
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 1.6e-34 151.0 319 75.5
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.1e-34 150.6 328 80.8
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.8e-34 150.2 328 80.5
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 8.1e-34 148.7 324 77.8
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.8e-33 147.5 315 78.7
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 2.3e-33 147.1 318 79.2
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 6.8e-33 145.6 319 80.9
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 1.2e-32 144.8 324 75.9
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.4e-32 143.3 325 68.9
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.3e-31 141.4 318 72.0
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.4e-30 137.9 317 74.8
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.4e-30 137.9 317 74.8
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 3.2e-30 136.7 328 44.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 3.5e-29 133.3 361 62.6
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 4.6e-29 132.9 320 69.1
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 6.0e-29 132.5 321 66.7
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.9e-27 127.5 325 74.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.5e-27 127.1 326 63.2
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.5e-27 127.1 322 64.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.2e-26 124.8 322 70.5
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.6e-26 124.4 325 74.8
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 6.2e-26 122.5 322 65.5
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 1.4e-25 121.3 300 78.7
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.8e-25 120.9 327 64.2
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.8e-25 120.9 322 63.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 3.1e-25 120.2 321 64.2
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 6.8e-25 119.0 83 66.3
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 6.8e-25 119.0 75 65.3
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 8.9e-25 118.6 83 63.9
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.5e-24 117.9 330 69.7
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.4e-24 116.7 279 81.0
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.4e-24 116.7 80 70.0
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.4e-22 111.3 86 59.3
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 1.9e-22 110.9 326 68.1
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 1.9e-22 110.9 326 68.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.4e-22 110.5 76 64.5
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 4.1e-22 109.8 326 68.1
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 9.2e-22 108.6 326 67.8
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 2.7e-21 107.1 315 54.3
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 5.1e-20 102.8 62 77.4
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.5e-19 101.3 59 78.0
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.4e-17 94.0 56 76.8
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.6e-16 90.5 325 58.5
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.7e-15 87.8 63 60.3
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 3.8e-15 86.7 313 40.9
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 9.3e-14 82.0 60 63.3
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 2.8e-10 70.5 44 72.7
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 6.9e-09 65.9 83 39.8
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 4.5e-08 63.2 42 64.3
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 5.8e-08 62.8 80 38.8
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 1.9e-06 57.8 58 46.6


User provided reference genes

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