Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.3e-42 176.4 118 100.0
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.3e-31 139.0 118 78.8
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 8.1e-29 130.6 113 70.8
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 5.2e-28 127.9 111 83.8
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 5.2e-28 127.9 111 83.8
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 8.9e-28 127.1 113 80.5
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 1.2e-27 126.7 115 74.8
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 4.4e-27 124.8 115 75.7
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.6e-27 124.0 115 60.9
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 2.2e-26 122.5 113 77.9
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 2.2e-26 122.5 111 80.2
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 3.8e-26 121.7 112 73.2
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 4.9e-26 121.3 113 75.2
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.1e-25 120.2 113 75.2
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 1.4e-25 119.8 113 60.2
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.4e-25 119.8 113 62.8
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.9e-25 119.4 116 69.8
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 3.2e-25 118.6 113 69.9
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 5.4e-25 117.9 113 77.0
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 7.1e-25 117.5 111 64.9
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.6e-24 116.3 114 71.9
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.1e-24 115.9 111 72.1
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 2.1e-24 115.9 116 68.1
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.1e-24 115.9 113 71.7
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 2.7e-24 115.5 116 67.2
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 2.7e-24 115.5 113 77.0
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.6e-24 114.8 113 71.7
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 4.6e-24 114.8 113 67.3
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 6.0e-24 114.4 113 71.7
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.0e-24 114.4 114 68.4
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 7.8e-24 114.0 114 68.4
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 7.8e-24 114.0 116 53.4
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 7.8e-24 114.0 116 66.4
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.0e-23 113.6 114 70.2
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.0e-23 113.6 113 73.5
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 1.3e-23 113.2 114 73.7
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-23 113.2 113 69.9
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 1.3e-23 113.2 117 53.8
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.7e-23 112.8 113 72.6
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 1.7e-23 112.8 113 63.7
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.7e-23 112.8 113 71.7
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 3.0e-23 112.1 112 75.9
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.0e-23 112.1 113 71.7
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 3.0e-23 112.1 113 70.8
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 3.9e-23 111.7 113 73.5
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 3.9e-23 111.7 114 54.4
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.1e-23 111.3 113 72.6
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 5.1e-23 111.3 106 83.0
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 6.6e-23 110.9 113 70.8
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 8.7e-23 110.5 115 73.9
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 8.7e-23 110.5 115 73.9
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 8.7e-23 110.5 114 71.1
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 8.7e-23 110.5 113 70.8
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 8.7e-23 110.5 114 68.4
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.1e-22 110.2 109 58.7
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.9e-22 109.4 113 67.3
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.9e-22 109.4 113 65.5
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.9e-22 109.4 116 69.0
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 2.5e-22 109.0 113 66.4
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 2.5e-22 109.0 113 69.9
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 3.3e-22 108.6 113 54.9
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 3.3e-22 108.6 113 71.7
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 5.6e-22 107.8 113 71.7
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 5.6e-22 107.8 111 52.3
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 9.6e-22 107.1 113 70.8
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 1.3e-21 106.7 113 66.4
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.3e-21 106.7 113 68.1
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.3e-21 106.7 113 67.3
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.3e-21 106.7 111 64.9
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.3e-21 106.7 113 70.8
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.1e-21 105.9 111 68.5
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 2.8e-21 105.5 113 53.1
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 2.8e-21 105.5 115 70.4
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 4.8e-21 104.8 115 54.8
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 8.1e-21 104.0 109 63.3
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 1.8e-20 102.8 113 71.7
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 3.1e-20 102.1 113 69.0
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 4.0e-20 101.7 111 47.7
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 6.9e-20 100.9 113 61.9
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.6e-19 99.0 115 51.3
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 3.4e-19 98.6 113 49.6
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 5.8e-19 97.8 112 69.6
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 2.2e-18 95.9 114 71.1
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 2.2e-18 95.9 111 68.5
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 3.8e-18 95.1 122 61.5
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 1.4e-17 93.2 100 62.0
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 1.9e-17 92.8 114 50.0
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 1.9e-17 92.8 93 77.4
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 3.2e-17 92.0 113 67.3
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 4.2e-17 91.7 114 67.5
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.2e-16 90.1 112 47.3
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 1.6e-16 89.7 113 67.3
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.7e-16 89.0 96 53.1
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 7.9e-16 87.4 86 72.1
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 1.0e-15 87.0 114 65.8
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 1.3e-15 86.7 114 64.0
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 3.0e-15 85.5 113 64.6
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.0e-15 85.5 114 46.5
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 3.0e-15 85.5 80 58.8
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 5.1e-15 84.7 115 64.3
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 8.7e-15 84.0 88 63.6
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 1.5e-14 83.2 114 64.0
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 1.9e-14 82.8 116 62.1
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 2.5e-14 82.4 109 64.2
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 2.5e-14 82.4 113 46.0
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 9.6e-14 80.5 48 85.4
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 1.3e-13 80.1 112 51.8
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.3e-13 80.1 48 83.3
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 2.1e-13 79.3 88 71.6
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 3.7e-13 78.6 46 84.8
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 4.8e-13 78.2 84 51.2
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 8.1e-13 77.4 107 53.3
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 1.1e-12 77.0 47 74.5
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 1.4e-12 76.6 46 80.4
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.8e-12 76.3 85 48.2
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.0e-12 75.1 90 70.0
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 5.3e-12 74.7 90 56.7
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 9.0e-12 73.9 91 69.2
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 9.0e-12 73.9 207 31.9
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 5.8e-11 71.2 87 44.8
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 7.6e-11 70.9 118 53.4
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 7.6e-11 70.9 45 75.6
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 2.2e-10 69.3 86 73.3
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 2.2e-10 69.3 85 68.2
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 6.4e-10 67.8 73 50.7
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.4e-09 66.6 106 61.3
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.6e-08 63.2 91 40.7
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 2.7e-08 62.4 80 62.5
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 1.3e-07 60.1 91 65.9
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 1.5e-06 56.6 99 34.3
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.4e-06 54.3 91 40.7


User provided reference genes

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