Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12870 Avicennia marina HOM05D000366 ORTHO05D000437 7.8e-197 690.3 349 100.0
MSTRG.12872 Avicennia marina HOM05D000366 ORTHO05D000437 3.1e-193 678.3 348 97.7
Migut.H01986 Erythranthe guttata HOM05D000366 ORTHO05D000437 1.2e-131 473.8 345 69.9
SalBow7G4451 Salvia bowleyana HOM05D000366 ORTHO05D000437 5.5e-126 454.9 346 69.7
Oeu051127.1 Olea europaea HOM05D000366 ORTHO05D000437 8.6e-111 404.4 346 61.6
unitig_749.g13537 Utricularia gibba HOM05D000366 ORTHO05D000437 3.0e-79 299.7 254 60.2
Cc05_g11270 Coffea canephora HOM05D000366 ORTHO05D000437 5.4e-73 278.9 312 51.6
Peaxi162Scf00069g02134 Petunia axillaris HOM05D000366 ORTHO05D000437 7.1e-73 278.5 315 48.6
Nitab4.5_0000246g0180 Nicotiana tabacum HOM05D000366 ORTHO05D000437 7.9e-72 275.0 268 54.9
Nitab4.5_0007253g0020 Nicotiana tabacum HOM05D000366 ORTHO05D000437 3.0e-71 273.1 267 54.3
Dinv18351 Davidia involucrata HOM05D000366 ORTHO05D000437 1.3e-69 267.7 301 50.2
CAN.G162.14 Capsicum annuum HOM05D000366 ORTHO05D000437 4.9e-66 255.8 317 46.4
Lj1C832G6 Lonicera japonica HOM05D000366 ORTHO05D000437 3.2e-65 253.1 305 47.5
Solyc07g062600.4 Solanum lycopersicum HOM05D000366 ORTHO05D000437 7.1e-65 251.9 292 49.3
Sopen07g030830 Solanum pennellii HOM05D000366 ORTHO05D000437 2.1e-64 250.4 282 49.6
Dinv14976 Davidia involucrata HOM05D000366 ORTHO05D000437 7.9e-64 248.4 301 48.5
DCAR_019593 Daucus carota HOM05D000366 ORTHO05D000437 1.8e-63 247.3 299 46.5
Lj8C150G3 Lonicera japonica HOM05D000366 ORTHO05D000437 6.9e-60 235.3 306 46.4
ECA234G4406 Erigeron canadensis HOM05D000366 ORTHO05D000437 4.9e-58 229.2 350 42.6
HanXRQChr10g0304861 Helianthus annuus HOM05D000366 ORTHO05D000437 4.3e-54 216.1 297 45.8
GSVIVG01014219001 Vitis vinifera HOM05D000366 ORTHO05D000437 7.4e-54 215.3 301 43.5
CSS0001097 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 3.7e-53 213.0 318 44.0
Hma1.2p1_2017F.1_g311140 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 6.3e-53 212.2 319 39.5
DCAR_021018 Daucus carota HOM05D000366 ORTHO05D000437 8.2e-53 211.8 346 38.4
Hma1.2p1_0052F.1_g029970 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 3.1e-52 209.9 319 39.2
Actinidia12564 Actinidia chinensis HOM05D000366 ORTHO05D000437 2.6e-51 206.8 314 43.3
Lsat_1_v5_gn_5_127360 Lactuca sativa HOM05D000366 ORTHO05D000437 2.2e-50 203.8 322 40.1
Actinidia35218 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.4e-49 201.1 354 38.4
vmacro09499 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 1.4e-49 201.1 313 43.8
Actinidia31603 Actinidia chinensis HOM05D000366 ORTHO05D000437 4.2e-49 199.5 314 42.4
Prupe.4G167700 Prunus persica HOM05D000366 ORTHO05D000437 4.6e-48 196.1 303 41.3
Rhsim04G0024800 Rhododendron simsii HOM05D000366 ORTHO05D000437 7.9e-48 195.3 306 43.1
Haze_09342 Corylus avellana HOM05D000366 ORTHO05D000437 2.3e-47 193.7 302 41.4
RcHm_v2.0_Chr5g0031311 Rosa chinensis HOM05D000366 ORTHO05D000437 5.7e-46 189.1 323 39.3
Thecc.07G107600 Theobroma cacao HOM05D000366 ORTHO05D000437 4.5e-43 179.5 300 39.0
Cfa019583 Carpinus fangiana HOM05D000366 ORTHO05D000437 7.7e-43 178.7 302 40.1
vmacro11921 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 7.7e-43 178.7 301 37.5
TAR626G0976 Trochodendron aralioides HOM05D000366 ORTHO05D000437 1.7e-42 177.6 312 38.8
FAN16G3372 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.2e-42 177.2 321 38.0
FAN21G1728 Fragaria x ananassa HOM05D000366 ORTHO05D000437 5.0e-42 176.0 321 37.4
FvH4_3g18560 Fragaria vesca HOM05D000366 ORTHO05D000437 8.5e-42 175.3 321 37.4
QL08p026669 Quercus lobata HOM05D000366 ORTHO05D000437 1.4e-41 174.5 297 38.7
MD03G1241200 Malus domestica HOM05D000366 ORTHO05D000437 7.2e-41 172.2 301 38.5
MD11G1260600 Malus domestica HOM05D000366 ORTHO05D000437 7.2e-41 172.2 300 38.0
Cpa.g.sc97.95 Carica papaya HOM05D000366 ORTHO05D000437 9.4e-41 171.8 320 35.9
FAN11G1632 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.1e-40 170.6 321 36.8
Duzib213G0779 Durio zibethinus HOM05D000366 ORTHO05D000437 3.6e-40 169.9 308 36.7
Potri.001G392801 Populus trichocarpa HOM05D000366 ORTHO05D000437 4.7e-40 169.5 323 37.2
Sabra16G0257700 Salix brachista HOM05D000366 ORTHO05D000437 2.0e-38 164.1 313 37.4
Ciclev10018500m.g Citrus clementina HOM05D000366 ORTHO05D000437 2.6e-38 163.7 320 36.2
COL.COLO4_17591 Corchorus olitorius HOM05D000366 ORTHO05D000437 2.6e-38 163.7 274 39.1
Sc16g0007490 Simmondsia chinensis HOM05D000366 ORTHO05D000437 1.7e-37 161.0 319 33.9
Lsat_1_v5_gn_7_103320 Lactuca sativa HOM05D000366 ORTHO05D000437 2.2e-37 160.6 172 47.7
Gohir.A11G287200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 5.3e-36 156.0 282 35.5
Gorai.007G326300 Gossypium raimondii HOM05D000366 ORTHO05D000437 9.1e-36 155.2 310 33.2
Manes.15G092800 Manihot esculenta HOM05D000366 ORTHO05D000437 9.1e-36 155.2 293 36.5
arahy.Tifrunner.gnm1.ann1.7Z9IPQ Arachis hypogaea HOM05D000366 ORTHO05D000437 1.2e-35 154.8 301 35.9
arahy.Tifrunner.gnm1.ann1.JLX6YP Arachis hypogaea HOM05D000366 ORTHO05D000437 1.2e-35 154.8 301 35.9
Atru.chr2.2204 Acer truncatum HOM05D000366 ORTHO05D000437 4.5e-35 152.9 316 35.4
Gohir.D11G305900 Gossypium hirsutum HOM05D000366 ORTHO05D000437 4.5e-35 152.9 311 33.4
ClCG11G017540 Citrullus lanatus HOM05D000366 ORTHO05D000437 1.9e-33 147.5 296 35.5
Lalb_Chr20g0109351 Lupinus albus HOM05D000366 ORTHO05D000437 7.2e-33 145.6 285 34.4
TWI39G0418 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 9.4e-33 145.2 257 37.7
TAR629G0390 Trochodendron aralioides HOM05D002478 ORTHO05D000437 1.6e-32 144.4 260 36.5
CsaV3_4G033210 Cucumis sativus L. HOM05D000366 ORTHO05D000437 2.1e-32 144.1 319 32.0
Nn1g09076 Nelumbo nucifera HOM05D000366 ORTHO05D000437 2.1e-32 144.1 329 33.7
CiPaw.11G161800 Carya illinoinensis HOM05D000366 ORTHO05D000437 2.7e-32 143.7 215 40.5
Lj3g0018614 Lotus japonicus HOM05D000366 ORTHO05D000437 8.0e-32 142.1 301 32.6
MELO3C025632.2 Cucumis melo HOM05D000366 ORTHO05D000437 3.0e-31 140.2 320 32.5
Gohir.A13G148700 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.1e-30 138.3 238 36.6
EL10Ac4g08310 Beta vulgaris HOM05D000366 ORTHO05D000437 1.5e-30 137.9 300 34.0
Gorai.013G173100 Gossypium raimondii HOM05D000366 ORTHO05D000437 1.5e-30 137.9 263 35.0
Glyma.12G228700 Glycine max HOM05D000366 ORTHO05D000437 2.6e-30 137.1 329 32.2
Phvul.005G067300 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 2.6e-30 137.1 335 31.9
AUR62036102 Chenopodium quinoa HOM05D000366 ORTHO05D000437 4.4e-30 136.3 295 31.5
CANSAT35G0453 Cannabis sativa HOM05D000366 ORTHO05D000437 5.7e-30 136.0 339 30.7
VMungo1080G1639 Vigna mungo HOM05D000366 ORTHO05D000437 5.7e-30 136.0 304 32.9
AUR62019535 Chenopodium quinoa HOM05D000366 ORTHO05D000437 1.3e-29 134.8 296 32.4
Lalb_Chr01g0016641 Lupinus albus HOM05D000366 ORTHO05D000437 1.7e-29 134.4 303 34.3
AL3G27310 Arabidopsis lyrata HOM05D000366 ORTHO05D000437 3.7e-29 133.3 270 35.2
ECA236G5053 Erigeron canadensis HOM05D000366 ORTHO05D000437 4.8e-29 132.9 166 41.6
Glyma.13G271100 Glycine max HOM05D000366 ORTHO05D000437 6.3e-29 132.5 336 31.5
PGR083G2734 Punica granatum HOM05D000366 ORTHO05D000437 6.3e-29 132.5 264 33.7
BolC5t33907H Brassica oleracea HOM05D000366 ORTHO05D000437 1.4e-28 131.3 284 33.8
Sed0008083 Sechium edule HOM05D000366 ORTHO05D000437 1.8e-28 131.0 275 33.8
BcaB06g25336 Brassica carinata HOM05D000366 ORTHO05D000437 4.1e-28 129.8 255 35.7
C05p52210 Brassica napus HOM05D000366 ORTHO05D000437 9.1e-28 128.6 284 33.1
AT3G14980 Arabidopsis thaliana HOM05D000366 ORTHO05D000437 1.6e-27 127.9 288 33.3
Ca_03999_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 5.9e-27 125.9 301 31.2
BraA05t22266Z Brassica rapa HOM05D000366 ORTHO05D000437 7.7e-27 125.6 268 32.5
Thhalv10019928m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 1.0e-26 125.2 272 34.6
Ah.06g185100 Amaranthus hybridus HOM05D000366 ORTHO05D000437 1.3e-26 124.8 296 29.7
Gohir.D13G153200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.7e-26 124.4 143 45.5
A05p34470 Brassica napus HOM05D000366 ORTHO05D000437 2.2e-26 124.0 289 31.8
Carub.0003s1464 Capsella rubella HOM05D000366 ORTHO05D000437 5.0e-26 122.9 267 34.5
Medtr2g078040 Medicago truncatula HOM05D000366 ORTHO05D000437 6.5e-26 122.5 262 32.4
CARHR089940 Cardamine hirsuta HOM05D000366 ORTHO05D000437 1.1e-25 121.7 267 34.1
Aa31LG8G2180 Aethionema arabicum HOM05D000366 ORTHO05D000437 1.5e-25 121.3 280 31.4
Psat5g238000 Pisum sativum HOM05D000366 ORTHO05D000437 1.5e-25 121.3 332 29.8
Sp3g13180 Schrenkiella parvula HOM05D000366 ORTHO05D000437 1.5e-25 121.3 267 33.0
MBI07_g22391_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 4.2e-25 119.8 298 32.6
TPR.G30903 Trifolium pratense HOM05D000366 ORTHO05D000437 7.2e-25 119.0 302 30.8
THA.LOC104810441 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 9.4e-25 118.6 329 31.0
TWI38G2315 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 4.0e-23 113.2 246 32.1
Aqoxy4G00413 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 5.2e-23 112.8 256 29.3
PSO782G5571 Papaver somniferum HOM05D000366 ORTHO05D000437 1.8e-20 104.4 254 30.3
Rhsim06G0206400 Rhododendron simsii HOM05D000366 ORTHO05D000437 2.4e-20 104.0 140 40.0
PSO063G4839 Papaver somniferum HOM05D000366 ORTHO05D000437 9.1e-20 102.1 254 29.9
Eucgr.F01223 Eucalyptus grandis HOM05D000366 ORTHO05D000437 4.5e-19 99.8 314 29.6
HPP92_001078 Vanilla planifolia HOM05D000366 ORTHO05D000437 6.5e-18 95.9 275 28.0
BcaB06g29525 Brassica carinata HOM05D000366 ORTHO05D000437 7.2e-17 92.4 283 28.3
PSO017G4808 Papaver somniferum HOM05D000366 ORTHO05D030420 1.4e-15 88.2 170 31.2
PSO478G1656 Papaver somniferum HOM05D000366 ORTHO05D030420 1.4e-15 88.2 254 27.2
PSO170G5984 Papaver somniferum HOM05D000366 ORTHO05D030420 7.5e-14 82.4 141 36.2
PSO455G0217 Papaver somniferum HOM05D000366 ORTHO05D030420 9.1e-12 75.5 138 32.6
CDE09G0928 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 4.2e-09 66.6 125 27.2
Os04g0433900 Oryza sativa ssp. japonica HOM05D000366 ORTHO05D000437 7.2e-09 65.9 139 33.8
Zm00001eb434470 Zea mays HOM05D000366 ORTHO05D000437 3.6e-08 63.5 142 28.2
Zm00001eb082620 Zea mays HOM05D000366 ORTHO05D000437 4.0e-07 60.1 141 29.8


User provided reference genes

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