Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11309 Avicennia marina HOM05D000423 ORTHO05D000284 5.8e-47 191.0 136 100.0
MSTRG.9301 Avicennia marina HOM05D000423 ORTHO05D000284 6.9e-32 141.0 135 70.4
MSTRG.4578 Avicennia marina HOM05D000423 ORTHO05D000284 1.6e-28 129.8 135 68.9
Oeu061236.1 Olea europaea HOM05D000423 ORTHO05D000284 3.4e-23 112.1 137 63.5
Cc04_g06290 Coffea canephora HOM05D000423 ORTHO05D000284 5.9e-23 111.3 136 61.8
Lj5A158T72 Lonicera japonica HOM05D000423 ORTHO05D000284 9.4e-21 104.0 139 60.4
Rhsim08G0126000 Rhododendron simsii HOM05D000423 ORTHO05D000284 3.6e-20 102.1 146 46.6
Oeu015087.1 Olea europaea HOM05D000423 ORTHO05D000284 7.9e-20 100.9 135 61.5
MD06G1226800 Malus domestica HOM05D000423 ORTHO05D000284 6.7e-19 97.8 150 56.7
HanXRQChr02g0032411 Helianthus annuus HOM05D000423 ORTHO05D000284 1.9e-18 96.3 137 53.3
Lsat_1_v5_gn_2_14960 Lactuca sativa HOM05D000423 ORTHO05D000284 2.5e-18 95.9 139 56.8
Prupe.5G233100 Prunus persica HOM05D000423 ORTHO05D000284 2.5e-18 95.9 150 55.3
ECA238G4637 Erigeron canadensis HOM05D000423 ORTHO05D000284 3.3e-18 95.5 136 60.3
HanXRQChr06g0179621 Helianthus annuus HOM05D000423 ORTHO05D000284 4.3e-18 95.1 139 59.0
Hma1.2p1_0669F.1_g200090 Hydrangea macrophylla HOM05D000423 ORTHO05D000284 5.7e-18 94.7 142 57.7
Cfa019659 Carpinus fangiana HOM05D000423 ORTHO05D000284 7.4e-18 94.4 138 57.2
PGR083G0012 Punica granatum HOM05D000423 ORTHO05D000284 7.4e-18 94.4 143 58.0
TAR629G1004 Trochodendron aralioides HOM05D000423 ORTHO05D000284 7.4e-18 94.4 134 58.2
Nitab4.5_0004556g0080 Nicotiana tabacum HOM05D000423 ORTHO05D000284 2.8e-17 92.4 143 53.1
MD14G1236300 Malus domestica HOM05D000423 ORTHO05D000284 3.7e-17 92.0 152 55.3
Nitab4.5_0007765g0010 Nicotiana tabacum HOM05D000423 ORTHO05D000284 3.7e-17 92.0 144 52.8
CSS0005048 Camellia sinensis var. sinensis HOM05D000423 ORTHO05D000284 6.3e-17 91.3 145 57.9
Peaxi162Scf00683g00461 Petunia axillaris HOM05D000423 ORTHO05D000284 6.3e-17 91.3 141 56.0
CiPaw.16G093200 Carya illinoinensis HOM05D000423 ORTHO05D000284 1.1e-16 90.5 138 57.2
Duzib084G1080 Durio zibethinus HOM05D000423 ORTHO05D000284 1.1e-16 90.5 137 58.4
Lalb_Chr16g0386981 Lupinus albus HOM05D000423 ORTHO05D000284 1.4e-16 90.1 143 56.6
Actinidia39840 Actinidia chinensis HOM05D000423 ORTHO05D000284 1.8e-16 89.7 144 43.1
Potri.012G047200 Populus trichocarpa HOM05D000423 ORTHO05D000284 1.8e-16 89.7 140 60.0
Lj9A420G40 Lonicera japonica HOM05D000423 ORTHO05D000284 2.4e-16 89.4 142 64.8
TAR371G1193 Trochodendron aralioides HOM05D000423 ORTHO05D000284 4.1e-16 88.6 137 44.5
CANSAT80G0127 Cannabis sativa HOM05D000423 ORTHO05D000284 5.3e-16 88.2 163 49.7
Duzib205G0900 Durio zibethinus HOM05D000423 ORTHO05D000284 5.3e-16 88.2 137 58.4
Thecc.03G057200 Theobroma cacao HOM05D000423 ORTHO05D000284 5.3e-16 88.2 139 57.6
Manes.14G171100 Manihot esculenta HOM05D000423 ORTHO05D000284 9.1e-16 87.4 141 57.4
TWI15G0760 Tripterygium wilfordii HOM05D000423 ORTHO05D000284 9.1e-16 87.4 138 58.0
CDE05G3482 Ceratophyllum demersum HOM05D000423 ORTHO05D000284 1.2e-15 87.0 135 60.0
Lj2g0006039 Lotus japonicus HOM05D000423 ORTHO05D000284 1.2e-15 87.0 139 51.8
Potri.015G038700 Populus trichocarpa HOM05D000423 ORTHO05D000284 1.2e-15 87.0 145 59.3
Sabra12G0033200 Salix brachista HOM05D000423 ORTHO05D000284 1.2e-15 87.0 140 58.6
FAN08G0260 Fragaria x ananassa HOM05D000423 ORTHO05D000284 1.5e-15 86.7 145 51.0
CDE05G3270 Ceratophyllum demersum HOM05D000423 ORTHO05D000284 2.0e-15 86.3 135 58.5
Gohir.D09G170400 Gossypium hirsutum HOM05D000423 ORTHO05D000284 2.0e-15 86.3 137 56.9
Gorai.006G191800 Gossypium raimondii HOM05D000423 ORTHO05D000284 2.0e-15 86.3 137 56.9
Sabra15G0037600 Salix brachista HOM05D000423 ORTHO05D000284 2.6e-15 85.9 149 55.7
Duzib068G0266 Durio zibethinus HOM05D000423 ORTHO05D000284 4.5e-15 85.1 137 56.2
Nn3g18275 Nelumbo nucifera HOM05D000423 ORTHO05D000284 4.5e-15 85.1 144 52.1
TWI81G0392 Tripterygium wilfordii HOM05D000423 ORTHO05D000284 4.5e-15 85.1 137 58.4
Eucgr.K02271 Eucalyptus grandis HOM05D000423 ORTHO05D000284 5.9e-15 84.7 134 56.7
Ciclev10007787m.g Citrus clementina HOM05D000423 ORTHO05D000284 1.0e-14 84.0 143 53.8
Manes.06G006800 Manihot esculenta HOM05D000423 ORTHO05D000284 1.0e-14 84.0 143 53.8
Aqoxy3G00068 Aquilegia oxysepala HOM05D000423 ORTHO05D000284 1.3e-14 83.6 145 52.4
CiPaw.15G143200 Carya illinoinensis HOM05D000423 ORTHO05D000284 2.9e-14 82.4 141 54.6
Cpa.g.c35483 Carica papaya HOM05D000423 ORTHO05D000284 3.8e-14 82.0 128 56.2
Phvul.004G150600 Phaseolus vulgaris HOM05D000423 ORTHO05D000284 5.0e-14 81.6 144 53.5
Sed0004000 Sechium edule HOM05D000423 ORTHO05D000284 5.0e-14 81.6 136 56.6
FvH4_5g17310 Fragaria vesca HOM05D000423 ORTHO05D000284 6.5e-14 81.3 148 50.0
FAN13G2671 Fragaria x ananassa HOM05D000423 ORTHO05D000284 6.5e-14 81.3 148 50.0
FAN18G0174 Fragaria x ananassa HOM05D000423 ORTHO05D000284 6.5e-14 81.3 148 50.0
Nn4g24230 Nelumbo nucifera HOM05D000423 ORTHO05D000284 6.5e-14 81.3 143 52.4
VMungo0464G0084 Vigna mungo HOM05D000423 ORTHO05D000284 6.5e-14 81.3 141 55.3
Gohir.A12G269300 Gossypium hirsutum HOM05D000423 ORTHO05D000284 8.5e-14 80.9 135 55.6
Gohir.D12G269750 Gossypium hirsutum HOM05D000423 ORTHO05D000284 8.5e-14 80.9 135 55.6
Gorai.008G290000 Gossypium raimondii HOM05D000423 ORTHO05D000284 8.5e-14 80.9 135 55.6
MELO3C002132.2 Cucumis melo HOM05D000423 ORTHO05D000284 1.4e-13 80.1 144 52.8
Glyma.07G102500 Glycine max HOM05D000423 ORTHO05D000284 1.4e-13 80.1 141 54.6
PSO478G0548 Papaver somniferum HOM05D000423 ORTHO05D000284 1.4e-13 80.1 158 40.5
FAN04G3263 Fragaria x ananassa HOM05D000423 ORTHO05D000284 1.9e-13 79.7 148 49.3
Sopen03g037680 Solanum pennellii HOM05D000423 ORTHO05D000284 1.9e-13 79.7 144 42.4
CsaV3_1G007160 Cucumis sativus L. HOM05D000423 ORTHO05D000284 2.5e-13 79.3 146 52.1
Migut.I00299 Erythranthe guttata HOM05D000423 ORTHO05D000284 2.5e-13 79.3 132 56.8
Gohir.D11G002800 Gossypium hirsutum HOM05D000423 ORTHO05D000284 2.5e-13 79.3 147 51.7
Gorai.007G003800 Gossypium raimondii HOM05D000423 ORTHO05D000284 2.5e-13 79.3 147 51.7
Glyma.09G176300 Glycine max HOM05D000423 ORTHO05D000284 3.2e-13 79.0 139 56.1
Haze_18847 Corylus avellana HOM05D000423 ORTHO05D000284 9.4e-13 77.4 132 54.5
Solyc03g118740.3 Solanum lycopersicum HOM05D000423 ORTHO05D000284 9.4e-13 77.4 144 42.4
Migut.D01545 Erythranthe guttata HOM05D000423 ORTHO05D000284 2.1e-12 76.3 147 53.1
PGSC0003DMG400005750 Solanum tuberosum HOM05D000423 ORTHO05D000284 2.1e-12 76.3 147 40.8
EL10Ac5g11546 Beta vulgaris HOM05D000423 ORTHO05D000284 3.6e-12 75.5 154 38.3
CDE05G2395 Ceratophyllum demersum HOM05D000423 ORTHO05D000284 4.7e-12 75.1 135 51.1
Medtr6g069510 Medicago truncatula HOM05D000423 ORTHO05D000284 6.1e-12 74.7 146 39.7
Sed0013364 Sechium edule HOM05D000423 ORTHO05D000284 6.1e-12 74.7 152 50.7
RcHm_v2.0_Chr7g0178461 Rosa chinensis HOM05D000423 ORTHO05D000284 1.0e-11 73.9 149 47.7
Hund02325 Selenicereus undatus HOM05D000423 ORTHO05D000284 1.0e-11 73.9 141 41.1
Ca_25340_v3 Cicer arietinum L. HOM05D000423 ORTHO05D000284 1.4e-11 73.6 146 39.0
Glyma.08G054700 Glycine max HOM05D000423 ORTHO05D000284 1.4e-11 73.6 146 45.9
Ca_25335_v3 Cicer arietinum L. HOM05D000423 ORTHO05D000284 1.8e-11 73.2 147 38.8
PSO017G4574 Papaver somniferum HOM05D000423 ORTHO05D000284 1.8e-11 73.2 162 37.0
ClCG04G010630 Citrullus lanatus HOM05D000423 ORTHO05D000284 2.3e-11 72.8 149 50.3
arahy.Tifrunner.gnm1.ann1.L76SLB Arachis hypogaea HOM05D000423 ORTHO05D000284 5.1e-11 71.6 148 39.2
Lalb_Chr24g0398181 Lupinus albus HOM05D000423 ORTHO05D000284 5.1e-11 71.6 110 56.4
Dinv27635 Davidia involucrata HOM05D000423 ORTHO05D000284 6.7e-11 71.2 142 39.4
Dinv16114 Davidia involucrata HOM05D000423 ORTHO05D000284 8.8e-11 70.9 143 51.7
CDE11G0515 Ceratophyllum demersum HOM05D000423 ORTHO05D000284 2.0e-10 69.7 135 57.0
AT1G73590 Arabidopsis thaliana HOM05D000423 ORTHO05D000284 2.6e-10 69.3 149 37.6
A02p18810 Brassica napus HOM05D000423 ORTHO05D000284 4.4e-10 68.6 147 39.5
BraA02t06924Z Brassica rapa HOM05D000423 ORTHO05D000284 4.4e-10 68.6 147 39.5
BcaB03g15062 Brassica carinata HOM05D000423 ORTHO05D000284 1.7e-09 66.6 145 38.6
Thhalv10018278m.g Eutrema salsugineum HOM05D000423 ORTHO05D000284 1.7e-09 66.6 153 36.6
AL2G33340 Arabidopsis lyrata HOM05D000423 ORTHO05D000284 2.2e-09 66.2 149 36.2
BraA07t31495Z Brassica rapa HOM05D000423 ORTHO05D000284 2.2e-09 66.2 146 38.4
Sp5g28750 Schrenkiella parvula HOM05D000423 ORTHO05D000284 2.2e-09 66.2 153 35.9
TPR.G8634 Trifolium pratense HOM05D000423 ORTHO05D000284 2.2e-09 66.2 146 36.3
Actinidia17961 Actinidia chinensis HOM05D000423 ORTHO05D000284 3.7e-09 65.5 136 49.3
ATR0564G511 Amborella trichopoda HOM05D000423 ORTHO05D000284 3.7e-09 65.5 152 48.7
A07p39460 Brassica napus HOM05D000423 ORTHO05D000284 3.7e-09 65.5 147 38.1
BolC6t39806H Brassica oleracea HOM05D000423 ORTHO05D000284 3.7e-09 65.5 144 36.1
Zm00001eb372180 Zea mays HOM05D000423 ORTHO05D000284 3.7e-09 65.5 135 39.3
Os06g0232300 Oryza sativa ssp. japonica HOM05D000423 ORTHO05D000284 4.8e-09 65.1 135 39.3
Cpa.g.c44255 Carica papaya HOM05D000423 ORTHO05D000284 6.3e-09 64.7 99 43.4
Psat1g032680 Pisum sativum HOM05D000423 ORTHO05D000284 8.2e-09 64.3 128 36.7
QL10p028900 Quercus lobata HOM05D000423 ORTHO05D000284 8.2e-09 64.3 151 57.0
CAN.G843.60 Capsicum annuum HOM05D000423 ORTHO05D000284 1.1e-08 63.9 136 36.8
C02p31220 Brassica napus HOM05D000423 ORTHO05D000284 1.4e-08 63.5 145 38.6
DCAR_014502 Daucus carota HOM05D000423 ORTHO05D000284 1.4e-08 63.5 135 52.6
Hund21339 Selenicereus undatus HOM05D000423 ORTHO05D000284 1.4e-08 63.5 136 38.2
Actinidia37877 Actinidia chinensis HOM05D000423 ORTHO05D000284 1.8e-08 63.2 136 49.3
THA.LOC104812169 Tarenaya hassleriana HOM05D000423 ORTHO05D000284 1.8e-08 63.2 150 35.3
ClCG04G005690 Citrullus lanatus HOM05D000423 ORTHO05D000284 3.1e-08 62.4 140 35.7
Sed0023937 Sechium edule HOM05D000423 ORTHO05D000284 3.1e-08 62.4 132 37.1
Nitab4.5_0000062g0070 Nicotiana tabacum HOM05D000423 ORTHO05D000284 4.1e-08 62.0 132 49.2
CANSAT64G1523 Cannabis sativa HOM05D000423 ORTHO05D000284 5.3e-08 61.6 136 36.0
Carub.0002s2033 Capsella rubella HOM05D000423 ORTHO05D000284 5.3e-08 61.6 154 42.2
MSTRG.6348 Avicennia marina HOM05D000423 ORTHO05D000284 7.0e-08 61.2 132 47.7
MELO3C019102.2 Cucumis melo HOM05D000423 ORTHO05D000284 7.0e-08 61.2 138 37.7
BcaC08g46777 Brassica carinata HOM05D000423 ORTHO05D000284 1.2e-07 60.5 148 45.3
C06p47680 Brassica napus HOM05D000423 ORTHO05D000284 1.2e-07 60.5 148 45.3
Peaxi162Scf01320g00018 Petunia axillaris HOM05D000423 ORTHO05D000284 1.2e-07 60.5 132 48.5
vmacro07777 Vaccinium macrocarpon HOM05D000423 ORTHO05D000284 1.2e-07 60.5 136 48.5
VMungo0251G2853 Vigna mungo HOM05D000423 ORTHO05D000284 1.2e-07 60.5 139 48.2
CsaV3_4G029470 Cucumis sativus L. HOM05D000423 ORTHO05D000284 1.5e-07 60.1 138 37.0
VMungo1383G0850 Vigna mungo HOM05D000423 ORTHO05D000284 1.5e-07 60.1 132 36.4
ECA248G3444 Erigeron canadensis HOM05D000423 ORTHO05D000284 2.0e-07 59.7 136 36.8
Os02g0743400 Oryza sativa ssp. japonica HOM05D000423 ORTHO05D000284 2.0e-07 59.7 139 37.4
Lj4g0009659 Lotus japonicus HOM05D000423 ORTHO05D000284 2.6e-07 59.3 136 39.0
Sed0015953 Sechium edule HOM05D000423 ORTHO05D000284 2.6e-07 59.3 145 37.2
MSTRG.19790 Avicennia marina HOM05D000423 ORTHO05D000284 3.4e-07 58.9 132 43.9
Nitab4.5_0003204g0010 Nicotiana tabacum HOM05D000423 ORTHO05D000284 3.4e-07 58.9 132 47.7
Peaxi162Scf00003g04923 Petunia axillaris HOM05D000423 ORTHO05D000284 4.5e-07 58.5 133 47.4
Phvul.011G164500 Phaseolus vulgaris HOM05D000423 ORTHO05D000284 4.5e-07 58.5 108 53.7
Atru.chr1.1405 Acer truncatum HOM05D000423 ORTHO05D000284 5.9e-07 58.2 138 47.1
Dinv00144 Davidia involucrata HOM05D000423 ORTHO05D000284 5.9e-07 58.2 136 43.4
Dinv05638 Davidia involucrata HOM05D000423 ORTHO05D000284 5.9e-07 58.2 136 43.4
Dinv21471 Davidia involucrata HOM05D000423 ORTHO05D000284 5.9e-07 58.2 132 43.9
Medtr7g089360 Medicago truncatula HOM05D000423 ORTHO05D000284 5.9e-07 58.2 137 36.5
PGR044G1045 Punica granatum HOM05D000423 ORTHO05D000284 5.9e-07 58.2 134 38.1
Cfa019991 Carpinus fangiana HOM05D000423 ORTHO05D000284 1.0e-06 57.4 132 45.5
Lj1A1088T17 Lonicera japonica HOM05D000423 ORTHO05D000284 1.0e-06 57.4 132 35.6
Aa31LG4G3790 Aethionema arabicum HOM05D000423 ORTHO05D000284 1.3e-06 57.0 148 37.2
CSS0016215 Camellia sinensis var. sinensis HOM05D000423 ORTHO05D000284 1.3e-06 57.0 136 44.9
CAN.G960.66 Capsicum annuum HOM05D000423 ORTHO05D000284 1.3e-06 57.0 132 47.0
Hma1.2p1_0380F.1_g139900 Hydrangea macrophylla HOM05D000423 ORTHO05D000284 1.3e-06 57.0 138 42.8
AUR62017007 Chenopodium quinoa HOM05D000423 ORTHO05D000284 1.7e-06 56.6 136 34.6
Migut.J01639 Erythranthe guttata HOM05D000423 ORTHO05D000284 1.7e-06 56.6 132 47.7
Glyma.03G126000 Glycine max HOM05D000423 ORTHO05D000284 1.7e-06 56.6 132 40.9
Nitab4.5_0006531g0010 Nicotiana tabacum HOM05D000423 ORTHO05D000284 2.2e-06 56.2 133 47.4
Oeu005212.1 Olea europaea HOM05D000423 ORTHO05D000284 2.2e-06 56.2 132 45.5
COL.COLO4_03481 Corchorus olitorius HOM05D000423 ORTHO05D000284 2.9e-06 55.8 131 45.0
SalBow6G5614 Salvia bowleyana HOM05D000423 ORTHO05D000284 2.9e-06 55.8 134 49.3
Atru.chr9.1738 Acer truncatum HOM05D000423 ORTHO05D000284 3.8e-06 55.5 108 38.0
Cc06_g19880 Coffea canephora HOM05D000423 ORTHO05D000284 3.8e-06 55.5 135 46.7
Eucgr.A02229 Eucalyptus grandis HOM05D000423 ORTHO05D000284 3.8e-06 55.5 142 38.0
Medtr8g107360 Medicago truncatula HOM05D000423 ORTHO05D000284 3.8e-06 55.5 119 46.2
Rhsim03G0036400 Rhododendron simsii HOM05D000423 ORTHO05D000284 3.8e-06 55.5 139 44.6
DCAR_013647 Daucus carota HOM05D000423 ORTHO05D000284 5.0e-06 55.1 138 44.9
Prupe.7G031400 Prunus persica HOM05D000423 ORTHO05D000284 5.0e-06 55.1 137 35.8
Solyc10g078370.2 Solanum lycopersicum HOM05D000423 ORTHO05D000284 5.0e-06 55.1 133 46.6
Sopen10g029030 Solanum pennellii HOM05D000423 ORTHO05D000284 5.0e-06 55.1 133 46.6
PGSC0003DMG400008379 Solanum tuberosum HOM05D000423 ORTHO05D000284 5.0e-06 55.1 133 46.6
TAR623G1701 Trochodendron aralioides HOM05D000423 ORTHO05D000284 5.0e-06 55.1 139 47.5
CARHR066610 Cardamine hirsuta HOM05D000423 ORTHO05D000284 6.5e-06 54.7 152 41.4
Zm00001eb254390 Zea mays HOM05D000423 ORTHO05D000284 6.5e-06 54.7 141 36.2
Nitab4.5_0000812g0030 Nicotiana tabacum HOM05D000423 ORTHO05D000284 8.5e-06 54.3 138 44.2
Oeu010316.1 Olea europaea HOM05D000423 ORTHO05D000284 8.5e-06 54.3 132 44.7
QL07p011518 Quercus lobata HOM05D000423 ORTHO05D000284 8.5e-06 54.3 132 44.7
TWI74G0272 Tripterygium wilfordii HOM05D000423 ORTHO05D000284 8.5e-06 54.3 138 44.9


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