Gene: Sopen03g037680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g037680
  • Transcript Identifier Sopen03g037680.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 72131176-72134390 : positive

Gene Family Information

  • ID HOM05D000423
  • #Genes/#Species 1212/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g037680.1

Descriptions

  • Description Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. | PIN-FORMED 1 (PIN1) | FUNCTIONS IN: transporter activity | INVOLVED IN: in 14 processes | LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup , Auxin efflux carrier | BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G73590
GO:0010315
ISO
PLAZA Integrative Orthologyauxin efflux Solyc03g118740.3
GO:0010338
ISO
PLAZA Integrative Orthologyleaf formation AT1G73590
GO:0010358
ISO
PLAZA Integrative Orthologyleaf shaping AT1G73590
GO:0010229
ISO
PLAZA Integrative Orthologyinflorescence development AT1G73590
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G73590
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G73590
GO:0048830
ISO
PLAZA Integrative Orthologyadventitious root development Os02g0743400
GO:0009926
ISO
PLAZA Integrative Orthologyauxin polar transport AT1G73590
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway Os02g0743400
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT1G73590
GO:0048826
ISO
PLAZA Integrative Orthologycotyledon morphogenesis AT1G73590
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT1G73590
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT1G73590
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G73590
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT1G73590
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010329
ISO
PLAZA Integrative Orthologyauxin efflux transmembrane transporter activity AT1G73590
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045177
ISO
PLAZA Integrative Orthologyapical part of cell AT1G73590
GO:0009925
ISO
PLAZA Integrative Orthologybasal plasma membrane AT1G73590
GO:0016021
IEA
InterProintegral component of membrane
GO:0009921
ISO
PLAZA Integrative Orthologyauxin efflux carrier complex Os02g0743400
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G73590
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G73590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004776 Membrane transport protein
IPR014024 Auxin efflux carrier, plant type
Mapman id Description
11.2.4.1.1 Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN)
24.2.5.2.1 Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN)