Gene: COL.COLO4_03481

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_03481
  • Transcript Identifier COL.rna2361
  • Gene Type Coding gene
  • Location AWUE01009888.1 : 2300-5189 : negative

Gene Family Information

  • ID HOM05D000423
  • #Genes/#Species 1212/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna2361
  • GenBank OMP12076.1
  • id gene3454
  • gene_name COLO4_03481
  • uniprot A0A1R3KYA9

Descriptions

  • Description Auxin efflux carrier
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT1G73590
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT1G73590
GO:1901332
ISO
PLAZA Integrative Orthologynegative regulation of lateral root development AT1G77110
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT1G77110
GO:0007389
ISO
PLAZA Integrative Orthologypattern specification process AT1G70940
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT1G70940
GO:0048826
ISO
PLAZA Integrative Orthologycotyledon morphogenesis AT1G73590
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT1G73590
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT2G01420
GO:0009942
ISO
PLAZA Integrative Orthologylongitudinal axis specification AT1G23080
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT1G70940
GO:0048830
ISO
PLAZA Integrative Orthologyadventitious root development Os02g0743400
GO:0010229
ISO
PLAZA Integrative Orthologyinflorescence development AT1G73590
GO:0010105
ISO
PLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathway AT1G77110
GO:0010540
ISO
PLAZA Integrative Orthologybasipetal auxin transport AT1G77110
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G73590
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0010082
ISO
PLAZA Integrative Orthologyregulation of root meristem growth AT1G70940
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G73590
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT1G73590
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G70940
GO:0009926
ISO
PLAZA Integrative Orthologyauxin polar transport AT1G73590
GO:0009606
ISO
PLAZA Integrative Orthologytropism AT1G70940
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G73590
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G73590
GO:0010358
ISO
PLAZA Integrative Orthologyleaf shaping AT1G73590
GO:0010338
ISO
PLAZA Integrative Orthologyleaf formation AT1G73590
GO:0010315
ISO
PLAZA Integrative Orthologyauxin efflux Solyc06g059730.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73590
GO:0010329
ISO
PLAZA Integrative Orthologyauxin efflux transmembrane transporter activity Solyc06g059730.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009921
ISO
PLAZA Integrative Orthologyauxin efflux carrier complex Os02g0743400
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G73590
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G73590
GO:0009986
ISO
PLAZA Integrative Orthologycell surface AT1G70940
GO:0012506
ISO
PLAZA Integrative Orthologyvesicle membrane AT1G70940
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016328
ISO
PLAZA Integrative Orthologylateral plasma membrane AT1G70940
GO:0009925
ISO
PLAZA Integrative Orthologybasal plasma membrane AT1G73590
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G23080
GO:0045177
ISO
PLAZA Integrative Orthologyapical part of cell AT1G73590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004776 Membrane transport protein
IPR014024 Auxin efflux carrier, plant type
Mapman id Description
11.2.4.1.1 Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN)
24.2.5.2.1 Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN)