Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 2.8e-143 511.9 258 100.0
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 2.3e-113 412.5 257 81.7
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 5.4e-110 401.4 261 77.0
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 2.7e-109 399.1 260 76.9
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 5.9e-109 397.9 258 78.7
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.9e-107 392.9 264 75.0
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 7.3e-107 391.0 263 76.0
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.6e-106 389.8 261 75.1
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 2.6e-104 382.5 261 75.5
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 7.5e-104 380.9 239 77.8
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 2.9e-103 379.0 260 74.2
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 4.9e-103 378.3 261 73.6
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 1.4e-102 376.7 261 73.6
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 1.9e-102 376.3 260 75.0
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 2.4e-102 375.9 261 74.7
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 2.4e-102 375.9 255 75.3
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 3.2e-102 375.6 261 73.6
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 4.1e-102 375.2 260 73.8
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 5.4e-102 374.8 259 73.7
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 5.4e-102 374.8 260 72.7
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 9.2e-102 374.0 259 73.7
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.6e-101 373.2 262 72.5
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 2.0e-101 372.9 260 71.5
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 2.0e-101 372.9 234 77.4
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 2.0e-101 372.9 274 70.1
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.7e-101 372.5 260 73.1
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 2.7e-101 372.5 261 72.8
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 4.6e-101 371.7 253 74.7
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 6.0e-101 371.3 260 73.1
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 6.0e-101 371.3 237 76.8
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 7.8e-101 370.9 258 72.1
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 1.0e-100 370.5 258 75.2
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 1.0e-100 370.5 252 72.6
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 1.0e-100 370.5 234 77.4
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.0e-100 370.5 260 73.5
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 1.3e-100 370.2 227 79.3
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 1.3e-100 370.2 239 75.7
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 1.3e-100 370.2 261 72.4
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 1.7e-100 369.8 258 72.1
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 2.3e-100 369.4 231 76.2
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 2.3e-100 369.4 259 72.2
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 3.0e-100 369.0 261 74.7
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 3.0e-100 369.0 258 71.3
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 5.0e-100 368.2 260 70.8
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 6.6e-100 367.9 258 71.7
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 1.1e-99 367.1 246 75.2
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 1.1e-99 367.1 227 79.3
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.5e-99 366.7 241 74.7
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.5e-99 366.7 232 77.6
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.9e-99 366.3 254 72.8
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 5.6e-99 364.8 258 71.7
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 7.3e-99 364.4 261 73.2
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 7.3e-99 364.4 261 72.0
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 9.5e-99 364.0 231 77.1
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 3.6e-98 362.1 261 72.8
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 1.1e-97 360.5 256 72.3
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 1.1e-97 360.5 252 73.4
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 2.3e-97 359.4 257 72.0
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 3.1e-97 359.0 261 69.0
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 4.0e-97 358.6 230 76.1
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.0e-97 358.6 258 73.3
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 4.0e-97 358.6 258 70.2
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 8.9e-97 357.5 209 85.2
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 2.0e-96 356.3 288 68.1
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 2.0e-96 356.3 255 69.8
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 2.0e-96 356.3 261 68.6
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 4.4e-96 355.1 260 69.6
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 4.4e-96 355.1 226 78.3
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 7.5e-96 354.4 247 70.9
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 9.8e-96 354.0 233 74.2
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 2.2e-95 352.8 248 71.0
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 4.1e-94 348.6 261 69.3
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 2.7e-93 345.9 257 71.2
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 2.3e-92 342.8 246 68.3
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 2.1e-90 336.3 241 69.3
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.4e-89 333.6 233 71.2
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 4.0e-89 332.0 238 70.6
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 4.0e-89 332.0 236 69.9
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 5.2e-89 331.6 238 70.2
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 8.9e-89 330.9 238 70.2
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 1.2e-88 330.5 231 70.6
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 2.0e-88 329.7 240 69.2
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 3.4e-88 328.9 221 72.4
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 1.7e-87 326.6 244 68.4
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.7e-87 326.6 238 69.7
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 2.2e-87 326.2 239 69.9
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 2.4e-86 322.8 237 68.4
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 3.2e-86 322.4 238 69.7
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 9.2e-86 320.9 238 69.7
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 2.1e-85 319.7 252 66.7
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 2.7e-85 319.3 240 67.9
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.7e-85 319.3 238 67.6
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 3.5e-85 318.9 238 69.3
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 4.6e-85 318.5 240 70.0
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 7.8e-85 317.8 231 66.2
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 2.3e-84 316.2 238 68.9
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 9.6e-83 310.8 248 66.5
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.2e-81 305.1 178 80.3
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 3.4e-80 302.4 275 60.4
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 4.8e-74 282.0 172 82.0
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.1e-73 280.8 171 81.9
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 3.8e-71 272.3 166 78.3
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 9.3e-70 267.7 185 73.0
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 7.9e-69 264.6 174 77.0
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 1.1e-67 260.8 156 76.9
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 6.2e-66 255.0 213 61.5
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 3.1e-65 252.7 171 74.9
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 9.9e-64 247.7 171 74.9
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 2.9e-63 246.1 242 55.8
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 4.9e-63 245.4 254 55.5
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 5.1e-60 235.3 189 64.6
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 6.9e-57 224.9 175 69.1
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 4.3e-43 179.1 243 44.9
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 7.7e-40 168.3 103 77.7
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 2.6e-32 143.3 93 74.2
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 2.5e-30 136.7 187 46.5
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 1.6e-29 134.0 89 71.9
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 2.1e-29 133.7 80 76.2
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 1.3e-26 124.4 219 39.3
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 4.8e-26 122.5 82 72.0
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.9e-23 113.2 75 73.3
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 1.2e-21 107.8 89 57.3
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 1.6e-21 107.5 91 61.5
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.0e-20 104.8 69 71.0
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.0e-20 102.8 204 38.7
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 5.7e-19 99.0 145 47.6
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 4.5e-16 89.4 161 37.3
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 7.7e-16 88.6 65 63.1
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 2.9e-15 86.7 58 67.2
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 1.0e-12 78.2 231 31.6
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.0e-12 78.2 65 63.1
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 3.4e-11 73.2 64 59.4
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 1.3e-07 61.2 51 64.7
C09p14660 Brassica napus HOM05D017738 ORTHO05D042708 3.8e-07 59.7 127 34.6
BolC9t54371H Brassica oleracea HOM05D017738 ORTHO05D042708 8.5e-07 58.5 94 39.4
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 2.5e-06 57.0 56 53.6
Cfa023417 Carpinus fangiana HOM05D005962 ORTHO05D123568 9.4e-06 55.1 161 28.6


User provided reference genes

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