Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028160.2 Cucumis melo HOM05D004674 ORTHO05D029175 7.6e-22 106.3 55 100.0
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 7.9e-11 69.7 41 85.4
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 5.1e-10 67.0 36 94.4
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 6.7e-10 66.6 36 91.7
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 88.9
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 1.1e-09 65.9 36 91.7
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 1.5e-09 65.5 41 80.5
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 1.5e-09 65.5 35 94.3
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 1.5e-09 65.5 35 94.3
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 1.5e-09 65.5 36 88.9
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 1.9e-09 65.1 36 86.1
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 1.9e-09 65.1 36 88.9
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 1.9e-09 65.1 36 88.9
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 2.5e-09 64.7 36 88.9
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 2.5e-09 64.7 36 88.9
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 2.5e-09 64.7 36 88.9
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.5e-09 64.7 38 86.8
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 3.3e-09 64.3 36 86.1
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 3.3e-09 64.3 36 86.1
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 3.3e-09 64.3 36 86.1
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 3.3e-09 64.3 36 88.9
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 4.3e-09 63.9 36 91.7
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 5.7e-09 63.5 36 83.3
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 7.4e-09 63.2 38 84.2
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 9.7e-09 62.8 35 85.7
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.3e-08 62.4 36 86.1
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 1.3e-08 62.4 36 83.3
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 1.3e-08 62.4 36 83.3
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 1.3e-08 62.4 36 83.3
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 1.6e-08 62.0 36 86.1
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 2.2e-08 61.6 40 77.5
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.2e-08 61.6 34 91.2
HanXRQChr08g0221331 Helianthus annuus HOM05D004674 ORTHO05D021509 3.7e-08 60.8 37 81.1
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 3.7e-08 60.8 36 80.6
MELO3C001880.2 Cucumis melo HOM05D004674 ORTHO05D029175 1.8e-07 58.5 29 100.0
MELO3C028263.2 Cucumis melo HOM05D004674 ORTHO05D029175 1.8e-07 58.5 29 100.0
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 3.1e-07 57.8 36 80.6
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 4.1e-07 57.4 36 72.2
MELO3C028166.2 Cucumis melo HOM05D004674 ORTHO05D029175 5.3e-07 57.0 29 96.6
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 5.3e-07 57.0 30 90.0
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 1.5e-06 55.5 44 70.5


User provided reference genes

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