Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 0.0e+00 1690.2 834 100.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 0.0e+00 1233.0 852 76.6
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 0.0e+00 1115.1 799 73.3
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 4.3e-294 1014.6 805 68.2
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 2.0e-259 899.4 811 61.4
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 7.2e-257 891.0 820 59.8
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.2e-254 883.6 761 62.8
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.5e-254 883.2 804 61.1
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 2.6e-254 882.5 762 62.5
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 2.2e-253 879.4 803 59.7
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 1.8e-252 876.3 804 60.6
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 3.1e-252 875.5 807 58.5
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 9.1e-252 874.0 809 60.0
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 1.6e-251 873.2 757 62.2
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.3e-250 870.2 813 59.3
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 2.3e-250 869.4 782 59.8
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 5.5e-249 864.8 824 58.7
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 1.0e-247 860.5 813 59.5
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 6.8e-247 857.8 747 60.0
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.5e-246 856.7 812 58.3
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 2.8e-245 852.4 782 59.5
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 1.1e-244 850.5 834 57.1
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 2.4e-244 849.4 808 58.4
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 2.4e-244 849.4 843 57.1
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.5e-243 845.5 804 58.2
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 4.5e-243 845.1 810 59.3
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 1.9e-241 839.7 808 58.0
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.5e-241 839.3 805 58.4
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.3e-241 839.0 802 57.7
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.6e-240 836.6 794 57.8
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 2.1e-240 836.3 806 57.1
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 2.8e-240 835.9 800 58.6
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.1e-240 834.7 802 57.9
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 6.1e-240 834.7 804 57.7
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.0e-239 833.9 817 57.6
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 8.9e-239 830.9 803 57.0
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 1.5e-238 830.1 817 57.5
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 3.4e-238 828.9 807 57.0
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 7.5e-238 827.8 806 57.2
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.3e-237 827.0 807 57.1
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 6.4e-237 824.7 802 58.1
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 1.1e-236 823.9 799 56.2
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 9.2e-236 820.8 812 56.7
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 2.7e-235 819.3 801 57.3
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 3.9e-234 815.5 810 57.3
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.5e-233 813.5 799 56.6
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 2.5e-233 812.8 807 56.8
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 5.6e-233 811.6 801 56.9
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 9.5e-233 810.8 804 57.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 4.7e-232 808.5 752 57.3
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 4.7e-232 808.5 801 55.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.4e-231 807.0 807 56.9
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 1.4e-231 807.0 811 55.2
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.3e-231 806.2 810 55.4
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 3.1e-231 805.8 805 56.1
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 4.0e-231 805.4 795 55.8
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.5e-230 803.5 795 56.4
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.5e-230 803.5 811 55.1
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 2.0e-230 803.1 797 56.5
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 5.8e-230 801.6 766 56.7
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 9.8e-230 800.8 814 54.9
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 9.8e-230 800.8 797 56.1
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.7e-229 800.0 825 55.4
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 4.9e-229 798.5 814 54.9
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.1e-228 797.3 790 54.8
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 1.9e-228 796.6 813 54.4
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 3.2e-228 795.8 804 57.0
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 2.3e-226 789.6 798 55.0
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.1e-225 787.3 832 54.0
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 2.5e-225 786.2 797 54.5
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 2.5e-225 786.2 813 55.4
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 3.3e-225 785.8 796 54.3
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 5.6e-225 785.0 797 54.3
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.6e-224 783.5 796 54.1
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.6e-224 783.5 797 54.2
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.6e-224 783.5 813 54.2
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 1.3e-221 773.9 795 54.0
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.7e-221 773.5 799 53.7
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 5.4e-220 768.5 748 55.9
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 2.5e-217 759.6 769 55.9
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.2e-216 757.3 799 53.6
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.8e-215 753.4 841 52.2
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 3.4e-214 749.2 802 53.4
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.2e-213 746.5 750 54.3
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 4.3e-209 732.3 737 54.3
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 2.1e-208 729.9 808 51.5
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 2.4e-207 726.5 680 60.1
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 5.6e-201 705.3 685 57.8
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 7.6e-198 694.9 680 57.8
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.8e-194 683.7 756 50.4
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.5e-193 679.9 677 55.4
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 3.2e-188 662.9 713 53.3
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.6e-187 660.6 814 48.8
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 6.7e-186 655.2 800 49.4
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 5.0e-165 585.9 596 57.2
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 9.7e-161 571.6 711 46.0
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 5.5e-140 502.7 550 51.1
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 6.6e-133 479.2 388 64.7
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.4e-114 418.3 545 45.3
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.6e-110 404.8 274 71.5
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 9.9e-97 359.0 364 56.3
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.6e-94 351.7 656 37.2
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-90 339.0 442 46.2
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-90 339.0 442 46.2
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.5e-89 335.1 235 68.5
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.7e-86 324.3 299 55.5
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 9.6e-84 315.8 685 34.2
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 4.3e-60 237.3 201 61.2
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 3.1e-58 231.1 682 28.9
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 8.5e-48 196.4 227 46.7
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.5e-47 194.9 238 52.5
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.2e-43 181.8 141 70.9
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.1e-34 151.4 123 60.2
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 4.1e-34 151.0 142 56.3
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 2.9e-32 144.8 124 58.1
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.6e-30 139.0 695 23.7


User provided reference genes

Program Settings