Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022916.2 Cucumis melo HOM05D003625 ORTHO05D004382 1.5e-98 362.8 180 100.0
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 1.3e-81 306.6 176 87.5
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 3.3e-74 282.0 165 86.1
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 4.0e-43 178.7 176 54.0
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 1.5e-42 176.8 177 57.1
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 9.4e-37 157.5 177 52.5
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 2.1e-36 156.4 181 51.4
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 2.7e-36 156.0 180 48.3
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 3.6e-36 155.6 177 51.4
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 3.6e-36 155.6 177 51.4
Haze_24022 Corylus avellana HOM05D003625 ORTHO05D004382 6.1e-36 154.8 167 52.1
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 8.0e-36 154.5 177 53.1
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 1.4e-35 153.7 171 48.0
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 5.2e-35 151.8 180 50.0
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 8.8e-35 151.0 177 50.3
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 1.2e-34 150.6 177 52.0
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 1.2e-34 150.6 176 48.9
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 8.3e-33 144.4 177 48.6
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 8.3e-33 144.4 180 50.0
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 1.4e-32 143.7 176 47.7
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 1.4e-32 143.7 176 47.7
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 9.1e-32 141.0 166 50.6
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 2.7e-31 139.4 180 45.6
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 2.7e-31 139.4 176 48.3
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 4.5e-31 138.7 182 48.9
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.0e-30 137.5 177 48.0
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 1.3e-30 137.1 177 48.6
Prupe.8G267900 Prunus persica HOM05D003625 ORTHO05D004382 5.0e-30 135.2 175 49.1
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 6.5e-30 134.8 176 46.6
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 8.6e-30 134.4 176 48.3
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 8.6e-30 134.4 175 49.1
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 1.5e-29 133.7 176 45.5
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 1.5e-29 133.7 177 46.9
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 4.2e-29 132.1 177 44.6
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 9.5e-29 131.0 181 46.4
Ca_01349_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 4.7e-28 128.6 173 45.1
arahy.Tifrunner.gnm1.ann1.DI3WFZ Arachis hypogaea HOM05D003625 ORTHO05D004382 1.0e-27 127.5 178 43.3
arahy.Tifrunner.gnm1.ann1.AN8C0D Arachis hypogaea HOM05D003625 ORTHO05D004382 1.4e-27 127.1 178 43.3
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 1.4e-27 127.1 178 43.3
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 1.4e-27 127.1 178 43.3
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 2.3e-27 126.3 176 45.5
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 4.0e-27 125.6 173 44.5
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 5.2e-27 125.2 179 43.0
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 1.2e-26 124.0 177 44.1
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 7.5e-26 121.3 180 45.0
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 1.3e-25 120.6 180 45.0
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 1.7e-25 120.2 183 43.7
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 2.2e-25 119.8 180 43.9
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 3.7e-25 119.0 178 42.1
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 8.3e-25 117.9 181 45.3
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 1.4e-24 117.1 186 42.5
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 1.8e-24 116.7 176 43.2
TPR.G34304 Trifolium pratense HOM05D003625 ORTHO05D004382 3.1e-24 115.9 178 42.7
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 3.1e-24 115.9 194 41.2
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 4.1e-24 115.5 191 40.8
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 5.4e-24 115.2 181 44.8
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.2e-23 114.0 176 40.9
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 1.6e-23 113.6 169 44.4
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 2.7e-23 112.8 182 40.1
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 3.5e-23 112.5 189 42.9
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 7.8e-23 111.3 171 45.0
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 1.7e-22 110.2 174 39.7
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 3.8e-22 109.0 176 39.2
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 5.0e-22 108.6 173 44.5
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 8.6e-22 107.8 180 41.7
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 1.1e-21 107.5 178 38.2
SGA_v2.0_scaffold1G00428 Striga asiatica HOM05D003625 ORTHO05D004382 2.5e-21 106.3 183 38.8
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 4.3e-21 105.5 186 37.6
Lalb_Chr24g0394281 Lupinus albus HOM05D003625 ORTHO05D004382 5.6e-21 105.1 179 41.9
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 7.3e-21 104.8 189 36.5
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 7.3e-21 104.8 174 38.5
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 1.6e-20 103.6 176 39.2
Hma1.2p1_0358F.1_g134800 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 3.0e-19 99.4 156 39.7
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 3.0e-19 99.4 179 39.7
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 8.9e-19 97.8 185 36.2
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 2.0e-18 96.7 182 38.5
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 2.6e-18 96.3 173 35.8
Sc17g0003680 Simmondsia chinensis HOM05D003625 ORTHO05D004382 2.6e-18 96.3 179 39.7
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 4.4e-18 95.5 121 50.4
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 7.5e-18 94.7 190 36.3
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 7.5e-18 94.7 176 39.2
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 1.3e-17 94.0 95 52.6
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.3e-17 94.0 95 52.6
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.3e-17 94.0 95 52.6
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.3e-17 94.0 95 52.6
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 4.9e-17 92.0 196 35.2
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 6.4e-17 91.7 95 51.6
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 1.1e-16 90.9 177 37.9
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 1.8e-16 90.1 174 39.7
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 4.1e-16 89.0 176 38.1
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 4.1e-16 89.0 90 48.9
CDE11G0573 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 5.4e-16 88.6 195 36.9
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 7.8e-15 84.7 149 39.6
unitig_0.g1186 Utricularia gibba HOM05D003625 ORTHO05D004382 1.0e-14 84.3 165 40.6
PSO407G0030 Papaver somniferum HOM05D003625 ORTHO05D004382 1.3e-14 84.0 195 31.8
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 1.7e-14 83.6 194 31.4
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 5.0e-14 82.0 144 38.9
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 1.5e-13 80.5 155 38.7
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 3.3e-13 79.3 173 34.1
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 9.5e-13 77.8 128 43.0
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 1.5e-10 70.5 181 29.8
AL6G49860 Arabidopsis lyrata HOM05D003625 ORTHO05D004382 2.6e-10 69.7 175 32.6
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 2.6e-10 69.7 126 38.9
Mapoly0033s0004 Marchantia polymorpha HOM05D003625 ORTHO05D004382 2.6e-10 69.7 207 32.9
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 3.4e-10 69.3 174 35.1
CARHR251510 Cardamine hirsuta HOM05D003625 ORTHO05D004382 2.2e-09 66.6 174 31.6
C09p02500 Brassica napus HOM05D003625 ORTHO05D004382 4.9e-09 65.5 82 40.2
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 4.9e-09 65.5 173 28.9
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 1.1e-08 64.3 171 30.4
BcaB01g01983 Brassica carinata HOM05D003625 ORTHO05D004382 1.4e-08 63.9 112 34.8
BolC9t53180H Brassica oleracea HOM05D003625 ORTHO05D004382 1.4e-08 63.9 112 34.8
Sp6g03120 Schrenkiella parvula HOM05D003625 ORTHO05D004382 1.9e-08 63.5 174 30.5
Carub.0006s3397 Capsella rubella HOM05D003625 ORTHO05D004382 2.4e-08 63.2 172 30.8
AT4G03090 Arabidopsis thaliana HOM05D003625 ORTHO05D004382 5.4e-08 62.0 174 29.9
BcaB01g01939 Brassica carinata HOM05D003625 ORTHO05D004382 7.0e-08 61.6 172 30.2
AagrBONN_evm.TU.Sc2ySwM_228.4764 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.2e-08 61.2 88 31.8
Aa31LG5G2610 Aethionema arabicum HOM05D003625 ORTHO05D004382 1.6e-07 60.5 172 29.7
A09p02400 Brassica napus HOM05D003625 ORTHO05D004382 4.6e-07 58.9 172 29.7
BraA09t35887Z Brassica rapa HOM05D003625 ORTHO05D004382 4.6e-07 58.9 172 29.7
Zm00001eb115510 Zea mays HOM05D003625 ORTHO05D004382 6.6e-06 55.1 182 32.4


User provided reference genes

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