Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 4.2e-181 637.9 314 100.0
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.1e-128 462.2 229 99.1
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 2.0e-122 443.0 229 93.9
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 1.0e-118 430.6 229 90.4
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 6.5e-110 401.4 229 85.2
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 2.7e-108 396.0 229 84.3
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 8.0e-108 394.4 229 83.8
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 1.8e-107 393.3 230 80.4
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 1.8e-107 393.3 229 82.5
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 5.2e-107 391.7 229 81.7
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 6.8e-107 391.3 229 80.8
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 6.8e-107 391.3 229 80.8
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.2e-106 390.6 244 79.1
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 2.6e-106 389.4 229 81.7
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 7.5e-106 387.9 229 81.2
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 9.8e-106 387.5 229 79.0
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 1.3e-105 387.1 229 81.7
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 1.7e-105 386.7 229 79.0
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 1.7e-105 386.7 229 79.9
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.7e-105 386.7 229 79.9
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 2.2e-105 386.3 229 80.8
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 2.8e-105 386.0 239 77.8
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 2.4e-104 382.9 229 78.6
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 2.4e-104 382.9 229 79.0
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 4.1e-104 382.1 229 80.3
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 5.4e-104 381.7 229 78.6
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 9.1e-104 380.9 229 80.8
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 2.0e-103 379.8 229 78.2
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 2.0e-103 379.8 229 79.5
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 2.7e-103 379.4 246 75.6
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.0e-102 377.5 229 76.0
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 1.3e-102 377.1 229 79.0
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 1.1e-101 374.0 229 76.4
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 2.5e-101 372.9 229 77.7
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 4.3e-101 372.1 229 78.2
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 4.3e-101 372.1 229 77.7
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 1.2e-100 370.5 229 74.7
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 1.2e-100 370.5 229 76.4
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.6e-100 370.2 229 77.7
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.1e-100 369.8 229 77.7
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 2.1e-100 369.8 229 77.3
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 8.0e-100 367.9 252 71.8
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 1.8e-99 366.7 229 77.7
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 3.0e-99 365.9 229 75.1
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 4.0e-99 365.5 229 76.0
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 6.8e-99 364.8 229 76.4
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 3.4e-98 362.5 229 76.0
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 4.4e-98 362.1 229 73.4
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 7.5e-98 361.3 230 76.1
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 7.5e-98 361.3 230 76.1
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 9.8e-98 360.9 229 75.1
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 9.8e-98 360.9 260 69.6
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 1.3e-97 360.5 229 75.1
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 1.7e-97 360.1 230 75.7
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.2e-97 359.8 229 73.8
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 2.2e-97 359.8 241 72.2
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 2.2e-97 359.8 229 74.7
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 2.2e-97 359.8 229 73.8
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 3.7e-97 359.0 229 73.4
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 3.7e-97 359.0 270 67.4
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 4.9e-97 358.6 229 75.1
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.1e-96 357.5 229 74.7
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 1.1e-96 357.5 229 73.8
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 1.4e-96 357.1 229 73.4
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 1.8e-96 356.7 229 72.9
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.8e-96 356.7 230 74.3
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 2.4e-96 356.3 229 72.9
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 3.2e-96 355.9 230 73.0
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 3.2e-96 355.9 230 73.5
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 5.4e-96 355.1 229 72.5
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 5.4e-96 355.1 229 73.4
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 7.0e-96 354.8 229 72.9
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 7.0e-96 354.8 229 72.9
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 9.2e-96 354.4 298 63.4
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 2.7e-95 352.8 229 72.5
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 4.6e-95 352.1 281 64.1
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 5.9e-95 351.7 230 73.9
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 5.9e-95 351.7 272 64.7
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.3e-94 350.5 230 72.6
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 5.0e-94 348.6 223 72.6
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 6.6e-94 348.2 222 73.4
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 1.1e-93 347.4 229 71.6
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 1.5e-93 347.1 230 71.7
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 1.9e-93 346.7 223 71.3
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 2.5e-93 346.3 230 71.7
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 3.3e-93 345.9 230 71.3
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 3.3e-93 345.9 229 71.2
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 7.3e-93 344.7 229 71.2
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 9.5e-93 344.4 199 81.4
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 1.2e-90 337.4 204 78.4
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 5.4e-88 328.6 204 77.0
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.6e-87 327.0 209 75.1
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 1.6e-87 327.0 195 78.5
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.3e-86 323.9 229 69.4
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 1.5e-82 310.5 213 73.2
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 2.2e-81 306.6 220 67.7
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 6.6e-78 295.0 299 54.2
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 2.8e-76 289.7 268 53.7
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 8.9e-75 284.6 239 56.5
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.7e-71 273.1 230 59.6
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.6e-71 272.3 229 62.0
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 6.6e-70 268.5 238 52.5
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 1.1e-59 234.6 235 51.5
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 1.2e-58 231.1 303 40.9
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.9e-57 226.5 249 48.6
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 1.6e-55 220.7 246 47.6
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.6e-53 212.2 148 73.0
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 1.1e-51 208.0 230 46.1
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 1.4e-48 197.6 236 41.9
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 9.3e-48 194.9 123 78.0
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.0e-46 191.4 325 40.3
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 2.2e-41 173.7 123 68.3
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 1.1e-40 171.4 95 77.9
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.4e-35 154.5 83 80.7
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.3e-33 147.9 97 74.2
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.9e-25 120.2 83 68.7
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.9e-25 120.2 83 68.7
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.1e-22 109.4 75 69.3
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 6.7e-22 109.0 58 81.0
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 1.1e-19 101.7 95 57.9
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 3.8e-17 93.2 64 70.3
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 4.7e-15 86.3 122 43.4
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 1.8e-14 84.3 51 72.5
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 8.8e-14 82.0 51 70.6
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 8.8e-14 82.0 51 70.6
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 2.0e-10 70.9 43 69.8
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 3.2e-08 63.5 37 73.0
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 3.2e-08 63.5 70 40.0
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 9.4e-08 62.0 38 68.4
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 2.7e-07 60.5 76 40.8
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 5.2e-06 56.2 79 36.7


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