Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 4.7e-149 531.2 269 100.0
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 4.2e-97 358.6 262 70.2
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 1.1e-78 297.4 281 60.9
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.8e-69 266.2 273 55.3
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 2.0e-67 260.0 239 56.5
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.6e-64 250.4 234 57.7
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 2.1e-64 250.0 241 54.8
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.7e-64 249.6 241 53.1
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 5.1e-63 245.4 269 52.4
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 5.1e-63 245.4 260 51.9
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 6.7e-63 245.0 239 55.2
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 6.7e-63 245.0 240 53.8
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.0e-62 243.4 256 51.2
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.0e-62 243.4 269 51.7
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 2.6e-62 243.0 239 53.6
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.7e-61 240.4 252 53.2
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.4e-60 237.3 240 52.9
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.2e-59 234.2 199 59.8
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.0e-59 233.4 232 53.0
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 3.4e-59 232.6 261 51.0
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.5e-59 232.3 269 50.6
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 7.7e-59 231.5 226 54.4
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 1.7e-58 230.3 233 50.6
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 2.2e-58 229.9 259 48.6
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 2.9e-58 229.6 249 50.6
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 3.8e-58 229.2 238 51.7
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 1.4e-57 227.3 255 51.0
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 1.4e-57 227.3 240 50.0
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.4e-57 227.3 245 49.8
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.9e-57 226.9 251 49.0
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 2.5e-57 226.5 259 49.0
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 3.2e-57 226.1 258 47.3
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 4.2e-57 225.7 256 49.2
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 4.2e-57 225.7 243 49.8
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 4.2e-57 225.7 259 48.3
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 4.2e-57 225.7 245 49.8
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 5.5e-57 225.3 255 49.0
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.6e-56 223.8 259 49.0
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.6e-56 223.8 227 52.9
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 2.1e-56 223.4 239 50.2
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 2.7e-56 223.0 238 50.8
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.6e-56 222.6 238 48.3
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 6.1e-56 221.9 248 50.0
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.0e-55 221.1 252 47.2
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 1.4e-55 220.7 219 52.1
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.4e-55 220.7 248 49.6
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.8e-55 220.3 240 49.6
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.8e-55 220.3 242 51.2
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 1.8e-55 220.3 243 51.0
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 2.3e-55 219.9 197 56.3
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.3e-55 219.9 238 49.6
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 5.2e-55 218.8 263 49.8
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 6.7e-55 218.4 249 49.4
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 8.8e-55 218.0 210 53.8
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 8.8e-55 218.0 225 50.7
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 1.1e-54 217.6 246 48.8
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 1.5e-54 217.2 263 49.8
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.5e-54 217.2 249 49.8
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 2.0e-54 216.9 241 50.2
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.0e-54 216.9 241 49.4
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 2.0e-54 216.9 242 46.3
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 2.0e-54 216.9 220 49.5
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.6e-54 216.5 246 49.2
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 3.3e-54 216.1 239 50.2
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.3e-54 216.1 196 57.1
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 3.3e-54 216.1 230 50.9
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 9.7e-54 214.5 245 47.3
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 2.2e-53 213.4 270 46.7
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 2.2e-53 213.4 251 48.2
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 2.8e-53 213.0 255 47.5
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 3.7e-53 212.6 266 48.5
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 4.8e-53 212.2 241 51.0
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.6e-51 207.2 223 48.0
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 2.6e-51 206.5 259 46.7
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 2.6e-51 206.5 265 43.4
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 2.6e-51 206.5 239 47.3
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 4.5e-51 205.7 258 46.5
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 5.9e-51 205.3 214 49.5
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 7.7e-51 204.9 235 44.7
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 7.7e-51 204.9 235 44.7
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 1.0e-50 204.5 280 43.2
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 2.2e-50 203.4 234 44.9
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 6.5e-50 201.8 258 46.1
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.5e-49 199.9 224 49.6
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 2.5e-49 199.9 241 44.8
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 2.5e-49 199.9 247 44.9
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 5.5e-49 198.7 197 51.8
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 7.2e-49 198.4 265 44.9
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 7.2e-49 198.4 224 49.6
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 1.2e-48 197.6 211 50.7
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 1.6e-48 197.2 210 47.6
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.6e-48 196.1 242 45.5
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 3.6e-48 196.1 264 42.0
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 6.1e-48 195.3 266 41.7
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 6.1e-48 195.3 193 51.8
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 4.0e-47 192.6 275 40.7
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 8.8e-47 191.4 213 50.2
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 2.0e-46 190.3 253 43.1
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.0e-46 190.3 253 43.1
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 3.3e-46 189.5 260 40.4
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.7e-46 188.7 253 42.7
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 7.5e-46 188.3 197 49.2
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 7.5e-46 188.3 179 50.8
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.2e-45 186.8 252 42.5
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 8.2e-45 184.9 243 42.8
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 7.2e-41 171.8 162 53.1
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.7e-40 169.9 253 39.9
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 8.0e-40 168.3 182 49.5
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 1.8e-39 167.2 156 56.4
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.3e-39 166.8 193 45.6
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 8.3e-37 158.3 202 43.1
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 1.1e-36 157.9 194 42.3
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 4.2e-33 146.0 194 40.7
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 1.2e-32 144.4 123 57.7
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.6e-32 144.1 200 39.0
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.0e-30 137.1 148 46.6
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.6e-24 117.5 139 44.6
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.0e-22 110.5 143 44.8
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 7.8e-19 98.6 116 48.3
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 5.0e-18 95.9 113 46.9
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 9.5e-17 91.7 182 35.2
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 2.8e-16 90.1 106 45.3
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 5.4e-12 75.9 79 50.6
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 3.9e-10 69.7 86 50.0


User provided reference genes

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