Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1197400 Malus domestica HOM05D004447 ORTHO05D005973 7.6e-54 213.4 95 100.0
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 1.0e-42 176.4 119 71.4
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 4.4e-41 171.0 119 66.4
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 9.7e-41 169.9 119 68.1
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 2.2e-40 168.7 119 66.4
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 2.8e-40 168.3 119 66.4
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 4.8e-40 167.5 119 65.5
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 8.2e-40 166.8 119 67.2
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 1.4e-39 166.0 119 65.5
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 2.4e-39 165.2 119 63.0
Peaxi162Scf00862g00001 Petunia axillaris HOM05D004447 ORTHO05D005973 5.3e-39 164.1 119 63.9
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 6.9e-39 163.7 120 64.2
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 6.9e-39 163.7 119 66.4
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 9.1e-39 163.3 119 63.9
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 9.1e-39 163.3 119 63.9
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 1.2e-38 162.9 119 65.5
vmacro17434 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 1.2e-38 162.9 119 66.4
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 1.5e-38 162.5 117 64.1
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 1.5e-38 162.5 119 63.9
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 1.5e-38 162.5 119 62.2
Actinidia26436 Actinidia chinensis HOM05D004447 ORTHO05D005973 2.0e-38 162.2 118 66.1
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 2.0e-38 162.2 119 63.0
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 2.6e-38 161.8 119 64.7
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.6e-38 161.8 119 64.7
FAN03G1122 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.6e-38 161.8 119 64.7
Hma1.2p1_0571F.1_g180890 Hydrangea macrophylla HOM05D004447 ORTHO05D005973 2.6e-38 161.8 120 64.2
Hma1.2p1_0571F.1_g180900 Hydrangea macrophylla HOM05D004447 ORTHO05D005973 2.6e-38 161.8 120 64.2
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 3.4e-38 161.4 119 62.2
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 3.4e-38 161.4 119 62.2
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 3.4e-38 161.4 119 62.2
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 3.4e-38 161.4 119 64.7
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 3.4e-38 161.4 119 65.5
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 3.4e-38 161.4 119 63.9
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 4.5e-38 161.0 119 64.7
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 4.5e-38 161.0 119 64.7
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 4.5e-38 161.0 119 64.7
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 4.5e-38 161.0 119 61.3
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 5.9e-38 160.6 119 61.3
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 5.9e-38 160.6 119 64.7
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 5.9e-38 160.6 119 63.0
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 5.9e-38 160.6 119 63.0
TAR636G2291 Trochodendron aralioides HOM05D004447 ORTHO05D005973 5.9e-38 160.6 119 63.0
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 7.7e-38 160.2 119 63.9
PGSC0003DMG401012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 7.7e-38 160.2 119 62.2
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 1.0e-37 159.8 119 61.3
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 1.0e-37 159.8 119 61.3
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 1.0e-37 159.8 119 62.2
CSS0002798 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 1.3e-37 159.5 119 63.0
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 1.3e-37 159.5 119 63.0
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 1.3e-37 159.5 119 63.0
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 1.7e-37 159.1 119 62.2
COL.COLO4_24890 Corchorus olitorius HOM05D004447 ORTHO05D005973 1.7e-37 159.1 119 63.0
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 1.7e-37 159.1 119 63.0
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.7e-37 159.1 119 62.2
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.2e-37 158.7 119 63.9
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 2.9e-37 158.3 119 61.3
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 2.9e-37 158.3 119 62.2
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 3.8e-37 157.9 119 63.0
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 5.0e-37 157.5 119 62.2
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 5.0e-37 157.5 119 61.3
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 5.0e-37 157.5 119 61.3
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 5.0e-37 157.5 119 61.3
ClCG08G000100 Citrullus lanatus HOM05D004447 ORTHO05D005973 6.5e-37 157.1 119 61.3
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 6.5e-37 157.1 119 61.3
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 6.5e-37 157.1 119 62.2
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 6.5e-37 157.1 119 62.2
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 6.5e-37 157.1 119 63.0
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 8.5e-37 156.8 118 61.9
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 1.4e-36 156.0 119 63.0
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 1.9e-36 155.6 119 60.5
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 1.9e-36 155.6 118 64.4
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 2.5e-36 155.2 119 59.7
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 2.5e-36 155.2 119 61.3
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 3.2e-36 154.8 119 60.5
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 3.2e-36 154.8 119 61.3
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 5.5e-36 154.1 119 60.5
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 9.4e-36 153.3 117 65.0
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 9.4e-36 153.3 119 62.2
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 9.4e-36 153.3 119 60.5
PSO455G0096 Papaver somniferum HOM05D004447 ORTHO05D005973 1.2e-35 152.9 119 60.5
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 1.2e-35 152.9 119 58.8
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 3.6e-35 151.4 122 59.8
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 3.6e-35 151.4 119 60.5
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 4.7e-35 151.0 118 61.0
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 1.0e-34 149.8 119 59.7
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 1.4e-34 149.4 115 59.1
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 1.4e-34 149.4 119 60.5
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 1.8e-34 149.1 116 60.3
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 1.8e-34 149.1 119 59.7
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 2.3e-34 148.7 122 58.2
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 2.3e-34 148.7 115 58.3
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 2.3e-34 148.7 115 58.3
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 2.3e-34 148.7 115 58.3
SHI27486 Sapria himalayana HOM05D004447 ORTHO05D005973 3.0e-34 148.3 119 60.5
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 3.9e-34 147.9 119 59.7
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 3.9e-34 147.9 119 58.0
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 5.2e-34 147.5 115 57.4
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 6.7e-34 147.1 123 56.9
CDE05G2287 Ceratophyllum demersum HOM05D004447 ORTHO05D005973 6.7e-34 147.1 120 58.3
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 8.8e-34 146.7 119 58.0
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 3.3e-33 144.8 119 54.6
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 4.4e-33 144.4 121 57.9
Zm00001eb278360 Zea mays HOM05D004447 ORTHO05D005973 4.4e-33 144.4 119 54.6
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 1.8e-31 139.0 124 53.2
unitig_0.g298 Utricularia gibba HOM05D004447 ORTHO05D005973 5.3e-31 137.5 92 68.5
HPP92_009576 Vanilla planifolia HOM05D004447 ORTHO05D005973 4.5e-30 134.4 119 50.4
CsaV3_6G052450 Cucumis sativus L. HOM05D004447 ORTHO05D005973 4.7e-27 124.4 119 54.6
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 1.4e-26 122.9 119 56.3
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 7.0e-23 110.5 223 34.1
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 1.6e-22 109.4 105 47.6
CBR_g41485 Chara braunii HOM05D004447 ORTHO05D005973 7.2e-20 100.5 135 37.0
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 1.2e-19 99.8 115 40.0
Psat0s3676g0040 Pisum sativum HOM05D004447 ORTHO05D018696 2.7e-19 98.6 61 67.2
GSVIVG01025457001 Vitis vinifera HOM05D004447 ORTHO05D005973 1.5e-17 92.8 105 50.5
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 4.4e-17 91.3 110 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 1.7e-16 89.4 116 41.4
AagrBONN_evm.TU.Sc2ySwM_362.493 Anthoceros agrestis HOM05D004447 ORTHO05D005973 7.7e-14 80.5 121 33.9
Ciclev10005880m.g Citrus clementina HOM05D004447 ORTHO05D005973 5.0e-13 77.8 59 62.7
PRCOL_00004147 Prasinoderma coloniale HOM05D004447 ORTHO05D005973 7.2e-12 73.9 124 32.3
AL7G41290 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 1.6e-11 72.8 68 54.4
MCO08G197 Micromonas commoda HOM05D004447 ORTHO05D005973 3.6e-11 71.6 110 31.8
SalBow6G4490 Salvia bowleyana HOM05D004447 ORTHO05D005973 4.7e-11 71.2 43 62.8
Lj6C4T5 Lonicera japonica HOM05D004447 ORTHO05D005973 8.0e-11 70.5 70 51.4
Actinidia23967 Actinidia chinensis HOM05D004447 ORTHO05D005973 6.8e-10 67.4 92 44.6
Lj6C14T1 Lonicera japonica HOM05D004447 ORTHO05D005973 1.2e-09 66.6 70 48.6


User provided reference genes

Program Settings