Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1187400 Malus domestica HOM05D001447 ORTHO05D008204 2.1e-80 302.4 158 100.0
MD03G1170000 Malus domestica HOM05D001447 ORTHO05D008204 4.5e-75 284.6 157 95.5
Glyma.11G016000 Glycine max HOM05D001447 ORTHO05D008204 2.2e-74 282.3 157 93.6
Medtr5g009070 Medicago truncatula HOM05D001447 ORTHO05D008204 5.0e-74 281.2 157 93.0
Rhsim13G0217100 Rhododendron simsii HOM05D001447 ORTHO05D008204 6.5e-74 280.8 157 93.0
Lj1A305G18 Lonicera japonica HOM05D001447 ORTHO05D008204 1.4e-73 279.6 157 91.7
Glyma.01G226700 Glycine max HOM05D001447 ORTHO05D008204 1.9e-73 279.3 157 91.7
VMungo1215G0901 Vigna mungo HOM05D001447 ORTHO05D008204 1.9e-73 279.3 157 91.7
CANSAT54G2932 Cannabis sativa HOM05D001447 ORTHO05D008204 2.5e-73 278.9 157 91.1
Eucgr.J00729 Eucalyptus grandis HOM05D001447 ORTHO05D008204 3.2e-73 278.5 157 91.7
vmacro04117 Vaccinium macrocarpon HOM05D001447 ORTHO05D008204 3.2e-73 278.5 157 92.4
arahy.Tifrunner.gnm1.ann1.FM4RDW Arachis hypogaea HOM05D001447 ORTHO05D008204 4.2e-73 278.1 157 91.1
CSS0026907 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D008204 4.2e-73 278.1 157 91.7
Lalb_Chr09g0320581 Lupinus albus HOM05D001447 ORTHO05D008204 4.2e-73 278.1 157 93.0
Prupe.4G257100 Prunus persica HOM05D001447 ORTHO05D008204 4.2e-73 278.1 157 92.4
QL01p018045 Quercus lobata HOM05D001447 ORTHO05D008204 4.2e-73 278.1 157 92.4
RcHm_v2.0_Chr5g0051161 Rosa chinensis HOM05D001447 ORTHO05D008204 4.2e-73 278.1 158 93.0
THA.LOC104826486 Tarenaya hassleriana HOM05D001447 ORTHO05D008204 4.2e-73 278.1 157 91.7
Ca_24494_v3 Cicer arietinum L. HOM05D001447 ORTHO05D008204 5.5e-73 277.7 157 92.4
DCAR_002090 Daucus carota HOM05D001447 ORTHO05D008204 5.5e-73 277.7 157 91.7
GSVIVG01031555001 Vitis vinifera HOM05D001447 ORTHO05D008204 5.5e-73 277.7 157 91.1
arahy.Tifrunner.gnm1.ann1.PC9ITH Arachis hypogaea HOM05D001447 ORTHO05D008204 7.2e-73 277.3 157 91.1
LjContig00222g0003711 Lotus japonicus HOM05D001447 ORTHO05D008204 9.4e-73 276.9 157 91.7
TPR.G37864 Trifolium pratense HOM05D001447 ORTHO05D008204 1.2e-72 276.6 157 91.7
MELO3C014571.2 Cucumis melo HOM05D001447 ORTHO05D008204 2.1e-72 275.8 157 90.4
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 2.1e-72 275.8 157 90.4
Zm00001eb212250 Zea mays HOM05D001447 ORTHO05D008204 2.7e-72 275.4 157 90.4
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 3.6e-72 275.0 157 92.4
FvH4_3g28280 Fragaria vesca HOM05D001447 ORTHO05D008204 3.6e-72 275.0 158 91.1
FAN11G0169 Fragaria x ananassa HOM05D001447 ORTHO05D008204 3.6e-72 275.0 158 91.1
Nn2g15047 Nelumbo nucifera HOM05D001447 ORTHO05D008204 3.6e-72 275.0 157 91.7
CiPaw.13G153500 Carya illinoinensis HOM05D001447 ORTHO05D008204 4.6e-72 274.6 157 91.7
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 4.6e-72 274.6 157 89.8
Migut.N02358 Erythranthe guttata HOM05D001447 ORTHO05D008204 6.1e-72 274.2 157 89.8
Psat0s3604g0040 Pisum sativum HOM05D001447 ORTHO05D008204 6.1e-72 274.2 157 90.4
Haze_23186 Corylus avellana HOM05D001447 ORTHO05D008204 1.0e-71 273.5 157 91.7
PSO339G2769 Papaver somniferum HOM05D001447 ORTHO05D008204 1.0e-71 273.5 157 89.2
PSO384G0341 Papaver somniferum HOM05D001447 ORTHO05D008204 1.0e-71 273.5 157 89.2
Hund21994 Selenicereus undatus HOM05D001447 ORTHO05D008204 1.0e-71 273.5 157 91.1
FAN21G0684 Fragaria x ananassa HOM05D001312 ORTHO05D008204 1.4e-71 273.1 158 90.5
Nitab4.5_0000733g0210 Nicotiana tabacum HOM05D001447 ORTHO05D008204 1.4e-71 273.1 157 91.7
Aqoxy2G00279 Aquilegia oxysepala HOM05D001447 ORTHO05D008204 1.8e-71 272.7 157 89.2
AUR62039844 Chenopodium quinoa HOM05D001447 ORTHO05D008204 1.8e-71 272.7 157 89.8
FAN16G0520 Fragaria x ananassa HOM05D001447 ORTHO05D008204 1.8e-71 272.7 159 89.9
Dinv36207 Davidia involucrata HOM05D001447 ORTHO05D008204 2.3e-71 272.3 157 90.4
TAR623G0906 Trochodendron aralioides HOM05D001447 ORTHO05D008204 2.3e-71 272.3 157 89.2
Atru.chr3.2626 Acer truncatum HOM05D001447 ORTHO05D008204 3.0e-71 271.9 157 89.2
Ciclev10014361m.g Citrus clementina HOM05D001447 ORTHO05D008204 3.0e-71 271.9 157 91.1
FAN25G0409 Fragaria x ananassa HOM05D001447 ORTHO05D008204 3.0e-71 271.9 158 89.9
Hma1.2p1_1043F.1_g251240 Hydrangea macrophylla HOM05D001447 ORTHO05D008204 3.0e-71 271.9 157 90.4
TWI39G0518 Tripterygium wilfordii HOM05D001447 ORTHO05D008204 3.0e-71 271.9 157 90.4
Nitab4.5_0001663g0090 Nicotiana tabacum HOM05D001447 ORTHO05D008204 3.9e-71 271.6 157 91.1
Ah.06g194360 Amaranthus hybridus HOM05D001447 ORTHO05D008204 5.1e-71 271.2 157 90.4
Sed0024633 Sechium edule HOM05D001447 ORTHO05D008204 5.1e-71 271.2 158 89.9
Thecc.09G241300 Theobroma cacao HOM05D001447 ORTHO05D008204 6.7e-71 270.8 157 89.8
Oeu043288.1 Olea europaea HOM05D001447 ORTHO05D008204 8.8e-71 270.4 157 90.4
Peaxi162Scf01713g00016 Petunia axillaris HOM05D001447 ORTHO05D008204 8.8e-71 270.4 157 90.4
Potri.009G049400 Populus trichocarpa HOM05D001447 ORTHO05D008204 8.8e-71 270.4 157 90.4
Solyc04g015490.4 Solanum lycopersicum HOM05D001447 ORTHO05D008204 8.8e-71 270.4 157 90.4
Sopen04g007560 Solanum pennellii HOM05D001447 ORTHO05D008204 8.8e-71 270.4 157 90.4
Phvul.002G165600 Phaseolus vulgaris HOM05D001447 ORTHO05D008204 1.1e-70 270.0 157 91.1
BcaB07g34095 Brassica carinata HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.8
A06p05510 Brassica napus HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.8
C05p06620 Brassica napus HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.8
BolC5t29422H Brassica oleracea HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.8
BraA06t23759Z Brassica rapa HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.8
Gohir.D08G021000 Gossypium hirsutum HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.2
Gorai.004G015600 Gossypium raimondii HOM05D001447 ORTHO05D008204 1.5e-70 269.6 157 89.2
Carub.0001s0788 Capsella rubella HOM05D001447 ORTHO05D008204 2.0e-70 269.2 157 89.2
AUR62000167 Chenopodium quinoa HOM05D001447 ORTHO05D008204 2.0e-70 269.2 157 89.8
COL.COLO4_36486 Corchorus olitorius HOM05D001312 ORTHO05D008204 2.0e-70 269.2 158 89.2
AT1G08520 Arabidopsis thaliana HOM05D001447 ORTHO05D008204 3.3e-70 268.5 157 89.2
CAN.G676.47 Capsicum annuum HOM05D001447 ORTHO05D008204 3.3e-70 268.5 157 89.8
Duzib150G1307 Durio zibethinus HOM05D001447 ORTHO05D008204 3.3e-70 268.5 157 88.5
Lsat_1_v5_gn_2_111701 Lactuca sativa HOM05D001447 ORTHO05D008204 3.3e-70 268.5 157 90.4
CSS0048252 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D008204 5.7e-70 267.7 157 88.5
Cpa.g.sc84.7 Carica papaya HOM05D001447 ORTHO05D008204 5.7e-70 267.7 157 88.5
ECA238G0809 Erigeron canadensis HOM05D001447 ORTHO05D008204 5.7e-70 267.7 157 89.8
HanXRQChr14g0453731 Helianthus annuus HOM05D001447 ORTHO05D008204 5.7e-70 267.7 157 89.8
SalBow6G0254 Salvia bowleyana HOM05D001447 ORTHO05D008204 5.7e-70 267.7 157 90.4
AL1G18950 Arabidopsis lyrata HOM05D001447 ORTHO05D008204 7.4e-70 267.3 157 88.5
Thhalv10006894m.g Eutrema salsugineum HOM05D001447 ORTHO05D008204 7.4e-70 267.3 157 89.2
Gohir.A08G010700 Gossypium hirsutum HOM05D001447 ORTHO05D008204 9.7e-70 266.9 157 88.5
Cc01_g06000 Coffea canephora HOM05D001447 ORTHO05D008204 1.3e-69 266.5 157 88.5
Os03g0811100 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D008204 2.2e-69 265.8 157 87.9
Sp1g07180 Schrenkiella parvula HOM05D001447 ORTHO05D008204 2.2e-69 265.8 157 88.5
ATR0721G176 Amborella trichopoda HOM05D001447 ORTHO05D008204 3.7e-69 265.0 157 86.0
PGR119G1003 Punica granatum HOM05D001447 ORTHO05D008204 3.7e-69 265.0 157 87.3
Aa31sc55G60 Aethionema arabicum HOM05D001447 ORTHO05D008204 1.8e-68 262.7 157 86.6
HPP92_003245 Vanilla planifolia HOM05D001447 ORTHO05D008204 3.1e-68 261.9 157 84.7
MSTRG.18450 Avicennia marina HOM05D001447 ORTHO05D008204 2.0e-67 259.2 157 87.3
Pp3c15_25050 Physcomitrium patens HOM05D001447 ORTHO05D008204 2.9e-66 255.4 157 83.4
SMO141G0042 Selaginella moellendorffii HOM05D001447 ORTHO05D008204 2.5e-65 252.3 157 81.5
Hma1.2p1_1043F.1_g251250 Hydrangea macrophylla HOM05D001447 ORTHO05D008204 5.5e-65 251.1 157 86.0
AagrBONN_evm.TU.Sc2ySwM_228.1203 Anthoceros agrestis HOM05D001447 ORTHO05D008204 2.7e-64 248.8 157 79.0
Mapoly0034s0094 Marchantia polymorpha HOM05D001447 ORTHO05D008204 2.7e-64 248.8 157 80.3
EL10Ac4g10183 Beta vulgaris HOM05D001447 ORTHO05D008204 1.1e-62 243.4 212 66.5
CBR_g18769 Chara braunii HOM05D001447 ORTHO05D008204 1.3e-61 240.0 157 75.8
MBI13_g04765_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D008204 8.5e-58 227.3 157 77.1
EL10Ac4g10182 Beta vulgaris HOM05D001447 ORTHO05D008204 1.2e-56 223.4 148 82.4
PRCOL_00004019 Prasinoderma coloniale HOM05D001447 ORTHO05D008204 3.6e-56 221.9 157 72.6
SEGI_28588 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 1.3e-53 213.4 129 83.7
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 8.2e-53 210.7 125 88.8
Cre05.g242000 Chlamydomonas reinhardtii HOM05D001447 ORTHO05D008204 3.1e-52 208.8 157 66.9
MCO04G050 Micromonas commoda HOM05D001447 ORTHO05D008204 5.9e-51 204.5 157 65.6
Sc16g0011200 Simmondsia chinensis HOM05D001447 ORTHO05D008204 8.3e-45 184.1 109 87.2
MCO16G689 Micromonas commoda HOM05D001447 ORTHO05D008204 6.6e-34 147.9 155 54.2
TAR383G0171 Trochodendron aralioides HOM05D001447 ORTHO05D008204 1.4e-28 130.2 74 87.8
SGA_v2.0_scaffold3G01472 Striga asiatica HOM05D001447 ORTHO05D008204 3.3e-09 65.9 33 97.0
SEGI_14967 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 1.6e-08 63.5 53 66.0


User provided reference genes

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