Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1048500 Malus domestica HOM05D000246 ORTHO05D009140 3.3e-161 571.6 284 100.0
MD03G1046200 Malus domestica HOM05D000246 ORTHO05D009140 1.4e-95 353.6 275 68.7
Prupe.6G037500 Prunus persica HOM05D000246 ORTHO05D009140 6.4e-80 301.6 275 60.4
FvH4_3g41250 Fragaria vesca HOM05D000246 ORTHO05D009140 4.6e-70 268.9 242 59.9
FAN11G0500 Fragaria x ananassa HOM05D000246 ORTHO05D009140 4.6e-70 268.9 242 59.9
FAN16G3185 Fragaria x ananassa HOM05D000246 ORTHO05D009140 4.6e-70 268.9 242 59.9
RcHm_v2.0_Chr5g0074061 Rosa chinensis HOM05D000246 ORTHO05D009140 1.1e-68 264.2 273 56.0
Haze_24501 Corylus avellana HOM05D000246 ORTHO05D009140 1.9e-55 220.3 277 48.4
CANSAT54G0602 Cannabis sativa HOM05D000246 ORTHO05D009140 3.2e-55 219.5 249 50.6
CiPaw.13G059300 Carya illinoinensis HOM05D000246 ORTHO05D009140 3.0e-53 213.0 270 49.3
GSVIVG01024519001 Vitis vinifera HOM05D000246 ORTHO05D009140 2.1e-51 206.8 211 50.7
Duzib168G1839 Durio zibethinus HOM05D000246 ORTHO05D009140 6.2e-51 205.3 162 60.5
Manes.18G122300 Manihot esculenta HOM05D000246 ORTHO05D009140 1.1e-50 204.5 222 50.5
QL01p023430 Quercus lobata HOM05D000246 ORTHO05D009140 1.1e-50 204.5 244 49.2
Sabra13G0128900 Salix brachista HOM05D000246 ORTHO05D009140 1.1e-50 204.5 296 45.6
MBI15_g11744_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D009140 4.5e-49 199.1 196 52.6
Ciclev10001421m.g Citrus clementina HOM05D000246 ORTHO05D009140 7.6e-49 198.4 220 49.5
Potri.013G161200 Populus trichocarpa HOM05D000246 ORTHO05D009140 1.3e-48 197.6 158 63.9
MELO3C008833.2 Cucumis melo HOM05D000246 ORTHO05D009140 2.2e-48 196.8 247 44.9
TWI74G1630 Tripterygium wilfordii HOM05D000246 ORTHO05D009140 2.9e-48 196.4 169 58.0
CsaV3_4G012090 Cucumis sativus L. HOM05D000246 ORTHO05D009140 3.8e-48 196.1 247 44.5
Atru.chr10.2369 Acer truncatum HOM05D000246 ORTHO05D009140 6.4e-48 195.3 234 49.1
TAR633G0607 Trochodendron aralioides HOM05D000246 ORTHO05D009140 6.4e-48 195.3 223 49.8
AUR62037584 Chenopodium quinoa HOM05D000246 ORTHO05D009140 2.4e-47 193.4 182 51.6
Lalb_Chr15g0085521 Lupinus albus HOM05D000246 ORTHO05D009140 3.5e-46 189.5 165 58.2
Actinidia11642 Actinidia chinensis HOM05D000246 ORTHO05D009140 2.3e-45 186.8 162 52.5
arahy.Tifrunner.gnm1.ann1.KDY275 Arachis hypogaea HOM05D000246 ORTHO05D009140 2.3e-45 186.8 249 44.2
Lj1A109T41 Lonicera japonica HOM05D000246 ORTHO05D009140 3.0e-45 186.4 220 46.4
Sc12g0000050 Simmondsia chinensis HOM05D000246 ORTHO05D009140 3.0e-45 186.4 235 46.0
Glyma.18G048900 Glycine max HOM05D000246 ORTHO05D009140 3.9e-45 186.0 175 54.3
arahy.Tifrunner.gnm1.ann1.32IKG8 Arachis hypogaea HOM05D000246 ORTHO05D009140 1.1e-44 184.5 250 43.6
Phvul.006G082600 Phaseolus vulgaris HOM05D000246 ORTHO05D009140 1.1e-44 184.5 176 53.4
Ah.04g164140 Amaranthus hybridus HOM05D000246 ORTHO05D009140 1.9e-44 183.7 163 55.8
CSS0047282 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009140 2.5e-44 183.3 255 42.0
EL10Ac4g08390 Beta vulgaris HOM05D000246 ORTHO05D009140 3.3e-44 183.0 160 54.4
Rhsim13G0056800 Rhododendron simsii HOM05D000246 ORTHO05D009140 4.3e-44 182.6 162 53.7
Lj6g0007866 Lotus japonicus HOM05D000246 ORTHO05D009140 7.4e-44 181.8 216 47.7
DCAR_004785 Daucus carota HOM05D000246 ORTHO05D009140 2.8e-43 179.9 225 42.7
Medtr3g063040 Medicago truncatula HOM05D000246 ORTHO05D009140 6.2e-43 178.7 197 49.2
Psat5g146240 Pisum sativum HOM05D000246 ORTHO05D009140 6.2e-43 178.7 166 55.4
TPR.G37336 Trifolium pratense HOM05D000246 ORTHO05D009140 6.2e-43 178.7 215 48.8
Sed0012503 Sechium edule HOM05D000246 ORTHO05D009140 8.1e-43 178.3 260 41.5
Aqoxy5G02490 Aquilegia oxysepala HOM05D000246 ORTHO05D009140 4.0e-42 176.0 179 48.0
Hund18366 Selenicereus undatus HOM05D000246 ORTHO05D009140 4.0e-42 176.0 214 43.9
TPR.G37358 Trifolium pratense HOM05D000246 ORTHO05D009140 4.0e-42 176.0 197 49.2
MELO3C008825.2 Cucumis melo HOM05D000246 ORTHO05D009140 5.3e-42 175.6 160 52.5
vmacro02858 Vaccinium macrocarpon HOM05D000246 ORTHO05D009140 5.3e-42 175.6 211 46.4
HanXRQChr01g0013541 Helianthus annuus HOM05D000246 ORTHO05D009140 1.5e-41 174.1 237 41.8
Sopen09g012230 Solanum pennellii HOM05D000246 ORTHO05D009140 1.5e-41 174.1 189 48.7
VMungo0540G0783 Vigna mungo HOM05D000246 ORTHO05D009140 2.6e-41 173.3 176 52.3
MSTRG.18522 Avicennia marina HOM05D000246 ORTHO05D009140 5.8e-41 172.2 181 47.0
Oeu020449.1 Olea europaea HOM05D000246 ORTHO05D009140 7.6e-41 171.8 160 52.5
Nitab4.5_0000539g0090 Nicotiana tabacum HOM05D000246 ORTHO05D009140 1.0e-40 171.4 162 51.9
CAN.G478.17 Capsicum annuum HOM05D000246 ORTHO05D009140 1.7e-40 170.6 162 51.2
ATR1127G158 Amborella trichopoda HOM05D000246 ORTHO05D009140 6.5e-40 168.7 163 47.9
ECA248G0782 Erigeron canadensis HOM05D000246 ORTHO05D009140 9.3e-39 164.9 243 39.1
Ca_15092_v3 Cicer arietinum L. HOM05D000246 ORTHO05D009140 1.2e-38 164.5 197 46.2
VMungo0540G2472 Vigna mungo HOM05D000246 ORTHO05D009140 1.2e-38 164.5 148 55.4
Glyma.11G201900 Glycine max HOM05D000246 ORTHO05D009140 2.1e-38 163.7 147 55.1
Peaxi162Scf00293g00723 Petunia axillaris HOM05D000246 ORTHO05D009140 6.0e-38 162.2 192 44.3
Solyc09g018690.4 Solanum lycopersicum HOM05D000246 ORTHO05D009140 2.3e-37 160.2 189 47.6
Cc01_g15610 Coffea canephora HOM05D000246 ORTHO05D009140 3.0e-37 159.8 161 49.7
CsaV3_4G012100 Cucumis sativus L. HOM05D000246 ORTHO05D009140 2.5e-36 156.8 161 47.2
Nitab4.5_0002399g0090 Nicotiana tabacum HOM05D000246 ORTHO05D009140 3.3e-36 156.4 142 52.8
Migut.D00789 Erythranthe guttata HOM05D000246 ORTHO05D009140 9.6e-36 154.8 161 47.2
Lsat_1_v5_gn_5_176881 Lactuca sativa HOM05D000246 ORTHO05D009140 1.3e-35 154.5 202 41.6
Os07g0681600 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D009140 3.4e-33 146.4 203 42.4
SGA_v2.0_scaffold158G37464 Striga asiatica HOM05D000246 ORTHO05D009140 3.8e-32 142.9 244 34.8
SEGI_37344 Sequoiadendron giganteum HOM05D000246 ORTHO05D009140 5.0e-32 142.5 237 34.2
Mapoly0130s0046 Marchantia polymorpha HOM05D000246 ORTHO05D009140 3.2e-31 139.8 221 37.6
Zm00001eb330800 Zea mays HOM05D000246 ORTHO05D009140 2.7e-30 136.7 168 44.0
HPP92_014358 Vanilla planifolia HOM05D000246 ORTHO05D009140 7.9e-30 135.2 208 37.5
SMO367G0949 Selaginella moellendorffii HOM05D000246 ORTHO05D009140 1.1e-28 131.3 214 36.0
ClCG04G005480 Citrullus lanatus HOM05D000246 ORTHO05D009140 1.2e-25 121.3 293 33.1
PGSC0003DMG402025422 Solanum tuberosum HOM05D000246 ORTHO05D009140 5.9e-25 119.0 130 46.9
AagrBONN_evm.TU.Sc2ySwM_228.2819 Anthoceros agrestis HOM05D000246 ORTHO05D009140 6.5e-24 115.5 179 35.8
Pp3c12_1610 Physcomitrium patens HOM05D000246 ORTHO05D009140 1.9e-23 114.0 161 36.6
CBR_g39230 Chara braunii HOM05D000246 ORTHO05D009140 1.4e-21 107.8 181 35.4


User provided reference genes

Program Settings