Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 7.0e-99 364.0 189 100.0
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 9.2e-75 283.9 235 69.4
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.4e-61 238.8 236 59.7
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 4.3e-48 195.3 237 51.1
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 9.5e-48 194.1 236 51.7
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 6.0e-42 174.9 236 48.3
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.5e-40 169.5 219 49.3
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.5e-40 169.5 244 47.1
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.5e-40 169.5 219 49.3
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.5e-40 169.5 222 45.9
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.6e-40 168.3 227 47.6
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.2e-39 167.2 220 46.8
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.6e-39 165.6 245 46.5
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 3.6e-39 165.6 217 45.2
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.1e-38 164.1 220 46.8
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.3e-38 161.8 228 47.4
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 9.0e-38 161.0 235 43.0
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.4e-37 158.7 219 47.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 7.6e-37 157.9 223 43.0
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 9.9e-37 157.5 221 44.3
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 8.4e-36 154.5 223 42.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.4e-35 153.7 255 41.6
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.4e-35 152.9 229 44.1
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 3.2e-35 152.5 215 42.3
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 7.1e-35 151.4 228 42.5
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 3.0e-33 146.0 226 42.9
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.1e-32 144.1 223 43.9
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 4.3e-32 142.1 126 57.9
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 7.3e-32 141.4 231 42.0
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.3e-31 140.6 224 42.4
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 3.6e-31 139.0 225 41.3
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.4e-30 137.1 225 41.8
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.4e-30 137.1 225 41.8
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.8e-30 136.7 223 39.9
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 6.9e-30 134.8 233 39.1
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.2e-29 134.0 131 51.9
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.5e-29 133.7 221 39.8
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 2.6e-29 132.9 225 38.7
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.6e-29 132.9 212 40.6
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 2.6e-29 132.9 225 37.3
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 5.8e-29 131.7 176 47.2
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.3e-28 130.6 231 36.4
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.3e-28 130.6 233 38.6
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 2.2e-28 129.8 214 40.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 2.2e-28 129.8 226 36.3
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 2.9e-28 129.4 221 38.5
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 4.9e-28 128.6 222 37.8
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 6.4e-28 128.3 214 40.2
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 6.4e-28 128.3 229 37.6
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 8.4e-28 127.9 214 39.7
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 8.4e-28 127.9 233 38.2
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.1e-27 127.5 214 40.2
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.4e-27 127.1 214 39.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 1.4e-27 127.1 213 39.9
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.9e-27 126.7 214 39.7
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.9e-27 126.7 231 37.2
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 2.4e-27 126.3 238 37.0
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 3.2e-27 125.9 225 38.7
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.2e-27 125.9 213 39.4
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 5.4e-27 125.2 228 36.0
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 7.1e-27 124.8 214 38.8
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.2e-26 124.0 221 38.9
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.6e-26 123.6 244 38.5
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 2.1e-26 123.2 201 37.8
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 3.5e-26 122.5 246 36.6
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 4.6e-26 122.1 233 38.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 6.0e-26 121.7 226 35.0
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 6.0e-26 121.7 229 37.6
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 7.9e-26 121.3 231 38.1
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 7.9e-26 121.3 212 38.2
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.3e-25 120.6 223 36.8
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.3e-25 120.6 225 37.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.8e-25 120.2 220 36.8
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.8e-25 120.2 193 40.9
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 3.0e-25 119.4 229 35.4
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 3.0e-25 119.4 133 48.9
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 3.0e-25 119.4 197 41.1
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 5.1e-25 118.6 207 37.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 5.1e-25 118.6 235 37.0
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 8.7e-25 117.9 239 36.0
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.1e-24 117.5 223 37.2
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.1e-24 117.5 220 36.8
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 4.3e-24 115.5 143 47.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 7.4e-24 114.8 220 34.1
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 9.6e-24 114.4 228 34.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.6e-23 113.6 226 33.6
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.6e-23 113.6 236 36.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 4.8e-23 112.1 241 35.7
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 8.1e-23 111.3 234 36.8
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 3.1e-22 109.4 233 34.8
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 3.4e-21 105.9 144 47.9
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 3.8e-20 102.4 226 34.1
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 3.2e-19 99.4 130 43.8
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 4.2e-19 99.0 127 41.7
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 2.3e-17 93.2 181 37.0
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 3.0e-17 92.8 208 36.1
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 5.3e-14 82.0 89 50.6
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.5e-11 72.0 61 55.7
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.6e-10 70.5 61 52.5
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 8.7e-09 64.7 80 50.0
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.4e-06 57.4 39 61.5


User provided reference genes

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