Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 0.0e+00 1274.2 647 100.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 0.0e+00 1117.4 586 96.2
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 8.0e-288 993.4 580 86.0
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 7.1e-244 847.4 578 74.4
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 2.1e-243 845.9 583 74.4
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 3.5e-243 845.1 578 74.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 3.8e-237 825.1 606 69.6
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.9e-237 824.7 611 70.4
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 8.4e-237 823.9 611 70.4
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 8.4e-237 823.9 611 70.4
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 3.2e-236 822.0 611 70.4
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 1.6e-235 819.7 583 71.5
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 1.3e-234 816.6 604 69.5
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 3.9e-234 815.1 581 70.6
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 3.9e-234 815.1 592 69.3
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 6.7e-234 814.3 584 71.4
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 6.7e-234 814.3 613 67.9
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.1e-233 813.5 584 71.7
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.1e-233 813.5 611 69.9
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 4.3e-233 811.6 583 69.8
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 1.3e-232 810.1 613 68.0
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 2.1e-232 809.3 583 71.4
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.4e-231 806.6 605 67.9
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.0e-230 802.7 583 69.5
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 4.5e-230 801.6 583 69.6
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 7.6e-230 800.8 584 69.7
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 4.9e-229 798.1 603 67.8
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 4.2e-228 795.0 612 66.8
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 7.1e-228 794.3 595 67.9
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-227 793.5 607 67.4
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 3.5e-227 792.0 583 69.0
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 4.6e-227 791.6 607 65.6
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 2.3e-226 789.3 607 67.4
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 3.0e-226 788.9 600 66.3
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 5.1e-226 788.1 582 69.6
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 6.7e-226 787.7 610 66.7
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 5.7e-225 784.6 619 65.4
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 2.4e-223 779.2 596 67.1
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.0e-221 773.9 609 66.8
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.0e-221 773.9 583 66.9
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 5.0e-221 771.5 582 68.0
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 1.2e-219 766.9 582 67.0
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 1.6e-219 766.5 624 64.6
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 4.6e-219 765.0 584 68.7
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 4.6e-219 765.0 612 65.7
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.4e-218 763.5 612 65.7
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 1.4e-218 763.5 598 65.6
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 1.8e-218 763.1 593 65.3
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 2.3e-218 762.7 580 67.6
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.3e-218 762.7 613 65.3
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 3.9e-218 761.9 580 67.4
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 5.1e-218 761.5 578 67.0
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 5.1e-218 761.5 584 66.6
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 6.7e-218 761.1 581 68.2
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 2.5e-217 759.2 643 62.4
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 5.7e-217 758.1 607 65.9
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 9.7e-217 757.3 595 64.9
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 9.7e-217 757.3 586 67.1
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 9.7e-217 757.3 610 64.9
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.7e-216 756.5 637 63.3
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 4.8e-216 755.0 581 65.6
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 4.8e-216 755.0 599 64.6
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 8.2e-216 754.2 600 64.8
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 1.1e-215 753.8 579 66.0
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 2.4e-215 752.7 589 65.7
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 3.1e-215 752.3 612 62.4
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 5.3e-215 751.5 582 65.8
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 5.3e-215 751.5 586 66.4
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 9.1e-215 750.7 578 65.9
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 1.2e-214 750.4 582 65.5
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.5e-214 750.0 587 65.9
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.5e-214 750.0 580 66.4
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 2.0e-214 749.6 585 65.8
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 2.6e-214 749.2 580 67.1
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 3.4e-214 748.8 565 66.5
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.3e-213 746.9 579 65.6
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.9e-213 745.7 598 63.9
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 6.5e-213 744.6 574 66.7
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 1.4e-212 743.4 603 63.2
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 3.2e-212 742.3 598 64.0
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 5.5e-212 741.5 584 65.2
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.6e-211 740.0 609 63.9
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 1.0e-210 737.3 585 65.1
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.3e-210 736.1 596 63.1
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 3.0e-210 735.7 590 63.1
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 3.0e-210 735.7 585 65.0
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 9.7e-209 730.7 585 64.6
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.4e-207 726.9 586 64.7
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 2.4e-207 726.1 497 71.4
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.4e-207 726.1 605 62.6
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 2.6e-206 722.6 555 65.6
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 7.7e-206 721.1 588 64.8
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.0e-205 720.7 582 63.7
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 1.3e-205 720.3 593 63.1
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.7e-205 719.9 584 63.5
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 1.9e-204 716.5 606 61.6
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 7.2e-204 714.5 565 65.5
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 9.4e-204 714.1 578 62.3
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 9.4e-204 714.1 577 64.8
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 1.2e-203 713.8 605 60.5
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 6.1e-203 711.4 592 62.0
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 1.0e-202 710.7 583 61.2
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 1.4e-202 710.3 604 58.9
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.3e-202 709.5 588 60.9
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.6e-201 706.1 533 65.3
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 1.3e-200 703.7 549 67.0
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.2e-198 697.2 581 62.1
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 5.9e-198 694.9 593 61.7
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.5e-196 689.5 577 62.4
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.4e-194 683.7 616 58.6
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.0e-189 667.5 620 60.0
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 4.0e-186 655.6 582 60.0
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 9.1e-183 644.4 578 57.8
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 3.6e-179 632.5 596 56.7
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 4.0e-178 629.0 504 63.7
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 6.8e-178 628.2 582 57.0
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 6.8e-178 628.2 604 54.5
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 6.4e-168 595.1 551 58.1
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 6.0e-158 562.0 581 54.7
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 1.9e-156 557.0 450 63.8
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 1.2e-153 547.7 611 48.0
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 7.5e-153 545.0 606 49.0
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 2.5e-148 530.0 625 47.4
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.1e-138 498.0 440 58.0
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 2.2e-136 490.3 608 45.6
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 3.9e-133 479.6 619 45.2
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 3.6e-131 473.0 391 64.2
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 5.8e-121 439.1 365 65.5
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 1.8e-117 427.6 449 47.7
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.3e-117 427.2 318 67.3
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.1e-111 408.3 494 47.8
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 3.2e-111 406.8 633 39.0
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.2e-110 404.8 316 64.6
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 9.0e-106 388.7 612 40.2
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 9.1e-98 362.1 352 55.4
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 8.0e-86 322.4 267 61.8
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 3.0e-85 320.5 452 39.8
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 5.7e-84 316.2 183 83.6
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 4.1e-66 256.9 626 32.9
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 5.9e-65 253.1 198 64.1
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.5e-60 238.4 168 67.9
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 1.6e-54 218.4 206 55.8
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 7.5e-52 209.5 135 71.9
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 7.8e-49 199.5 119 84.9
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 1.9e-47 194.9 371 38.3
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.2e-42 177.6 120 75.8
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 6.6e-40 169.9 182 54.9
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 1.4e-37 162.2 115 73.0
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.8e-37 161.8 115 72.2
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 6.6e-32 143.3 82 80.5
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 5.2e-29 133.7 135 54.8
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-28 132.5 101 66.3
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.4e-28 131.0 101 65.3
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 9.9e-28 129.4 80 75.0
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 9.3e-26 122.9 78 67.9
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 1.6e-25 122.1 210 40.5
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 2.1e-22 111.7 181 44.2
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 2.6e-20 104.8 65 80.0
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 3.0e-16 91.3 109 56.0
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 4.3e-15 87.4 71 63.4
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 8.1e-14 83.2 142 44.4
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 9.9e-12 76.3 56 58.9
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 1.6e-06 58.9 39 71.8
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 2.8e-06 58.2 36 83.3
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 2.8e-06 58.2 44 68.2
TAR636G1761 Trochodendron aralioides HOM05D004159 ORTHO05D415208 8.1e-06 56.6 81 49.4


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