Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1351100 Malus domestica HOM05D006131 ORTHO05D008649 4.4e-269 930.6 446 100.0
Prupe.4G016400 Prunus persica HOM05D006131 ORTHO05D008649 1.1e-158 563.9 558 57.2
MD10G1325600 Malus domestica HOM05D006131 ORTHO05D008649 1.2e-157 560.5 558 58.4
FvH4_3g01570 Fragaria vesca HOM05D006131 ORTHO05D008649 1.3e-148 530.4 558 55.6
RcHm_v2.0_Chr5g0002381 Rosa chinensis HOM05D006131 ORTHO05D008649 1.5e-147 526.9 558 55.0
FAN25G2733 Fragaria x ananassa HOM05D006131 ORTHO05D008649 4.3e-147 525.4 559 54.4
QL05p072288 Quercus lobata HOM05D006131 ORTHO05D008649 2.1e-141 506.5 559 51.0
Glyma.07G263100 Glycine max HOM05D006131 ORTHO05D008649 2.7e-141 506.1 555 52.3
Haze_06845 Corylus avellana HOM05D006131 ORTHO05D008649 6.0e-141 505.0 595 49.9
GSVIVG01012668001 Vitis vinifera HOM05D006131 ORTHO05D008649 2.3e-140 503.1 559 50.8
Cfa000174 Carpinus fangiana HOM05D006131 ORTHO05D008649 3.0e-140 502.7 559 51.3
Manes.17G028300 Manihot esculenta HOM05D006131 ORTHO05D008649 3.9e-140 502.3 560 51.6
TWI38G1228 Tripterygium wilfordii HOM05D006131 ORTHO05D008649 3.9e-140 502.3 559 52.1
VMungo1215G1261 Vigna mungo HOM05D006131 ORTHO05D008649 1.5e-139 500.4 559 50.6
Potri.011G009600 Populus trichocarpa HOM05D006131 ORTHO05D008649 4.3e-139 498.8 559 51.5
CANSAT56G3890 Cannabis sativa HOM05D006131 ORTHO05D008649 5.6e-139 498.4 559 50.6
Medtr4g132500 Medicago truncatula HOM05D006131 ORTHO05D008649 5.6e-139 498.4 559 51.0
CsaV3_6G048760 Cucumis sativus L. HOM05D006131 ORTHO05D008649 7.3e-139 498.0 559 50.6
Duzib235G1477 Durio zibethinus HOM05D006131 ORTHO05D008649 7.3e-139 498.0 559 50.8
TPR.G36994 Trifolium pratense HOM05D006131 ORTHO05D008649 9.5e-139 497.7 557 51.3
Ciclev10014171m.g Citrus clementina HOM05D006131 ORTHO05D008649 3.6e-138 495.7 559 51.3
Lalb_Chr07g0177101 Lupinus albus HOM05D006131 ORTHO05D008649 1.8e-137 493.4 559 49.7
CiPaw.09G096900 Carya illinoinensis HOM05D006131 ORTHO05D008649 2.3e-137 493.0 556 51.1
Phvul.003G081300 Phaseolus vulgaris HOM05D006131 ORTHO05D008649 2.3e-137 493.0 555 50.8
Cc09_g01330 Coffea canephora HOM05D006131 ORTHO05D008649 3.1e-137 492.7 559 50.6
Sabra11G0007600 Salix brachista HOM05D006131 ORTHO05D008649 3.1e-137 492.7 555 50.6
ClCG01G021720 Citrullus lanatus HOM05D006131 ORTHO05D008649 5.2e-137 491.9 559 49.7
Cpa.g.sc152.47 Carica papaya HOM05D006131 ORTHO05D008649 8.9e-137 491.1 559 50.4
Lj4g0011530 Lotus japonicus HOM05D006131 ORTHO05D008649 2.0e-136 490.0 559 49.4
Nn7g38008 Nelumbo nucifera HOM05D006131 ORTHO05D008649 2.0e-136 490.0 559 49.4
Gohir.A06G150500 Gossypium hirsutum HOM05D006131 ORTHO05D008649 2.6e-136 489.6 559 50.4
Gohir.D06G156700 Gossypium hirsutum HOM05D006131 ORTHO05D008649 3.4e-136 489.2 559 50.6
Gorai.010G183100 Gossypium raimondii HOM05D006131 ORTHO05D008649 4.4e-136 488.8 559 50.4
Sc17g0007540 Simmondsia chinensis HOM05D006131 ORTHO05D008649 4.4e-136 488.8 569 49.4
arahy.Tifrunner.gnm1.ann1.34DY78 Arachis hypogaea HOM05D006131 ORTHO05D008649 5.8e-136 488.4 555 50.5
Aqoxy1G03037 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 1.7e-135 486.9 559 49.6
arahy.Tifrunner.gnm1.ann1.EVIY4K Arachis hypogaea HOM05D006131 ORTHO05D008649 1.7e-135 486.9 555 50.3
TAR627G0028 Trochodendron aralioides HOM05D006131 ORTHO05D008649 1.7e-135 486.9 559 49.0
Aqoxy1G02667 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 2.9e-135 486.1 561 49.7
Sed0009561 Sechium edule HOM05D006131 ORTHO05D008649 8.3e-135 484.6 559 49.4
Ca_21065_v3 Cicer arietinum L. HOM05D006131 ORTHO05D008649 4.1e-134 482.3 558 50.4
Ah.09g234600 Amaranthus hybridus HOM05D006131 ORTHO05D008649 7.1e-134 481.5 557 49.9
Psat4g005600 Pisum sativum HOM05D006131 ORTHO05D008649 7.1e-134 481.5 555 49.7
Hund21429 Selenicereus undatus HOM05D006131 ORTHO05D008649 7.1e-134 481.5 557 49.0
EL10Ac8g20116 Beta vulgaris HOM05D006131 ORTHO05D008649 9.2e-134 481.1 557 50.3
Lj1C1234T13 Lonicera japonica HOM05D006131 ORTHO05D008649 2.1e-133 479.9 559 49.4
Atru.chr10.2271 Acer truncatum HOM05D000321 ORTHO05D008649 2.3e-132 476.5 556 51.4
CSS0011000 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 3.0e-132 476.1 546 50.0
HanXRQChr16g0516961 Helianthus annuus HOM05D006131 ORTHO05D008649 3.0e-132 476.1 568 48.6
PSO541G3086 Papaver somniferum HOM05D006131 ORTHO05D008649 6.6e-132 474.9 555 49.5
Hma1.2p1_0298F.1_g117540 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.9e-131 473.4 558 48.4
Hma1.2p1_0298F.1_g117550 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 1.9e-131 473.4 558 48.4
AUR62012745 Chenopodium quinoa HOM05D006131 ORTHO05D008649 3.3e-131 472.6 557 49.0
Rhsim13G0150700 Rhododendron simsii HOM05D006131 ORTHO05D008649 9.5e-131 471.1 555 49.4
Nitab4.5_0004743g0170 Nicotiana tabacum HOM05D006131 ORTHO05D008649 1.2e-130 470.7 559 48.3
AUR62021912 Chenopodium quinoa HOM05D006131 ORTHO05D008649 1.6e-130 470.3 557 48.7
PGR042G2674 Punica granatum HOM05D006131 ORTHO05D008649 2.1e-130 469.9 560 49.1
Sopen02g025670 Solanum pennellii HOM05D006131 ORTHO05D008649 2.1e-130 469.9 559 48.5
Actinidia02346 Actinidia chinensis HOM05D006131 ORTHO05D008649 2.8e-130 469.5 559 49.4
THA.LOC104806315 Tarenaya hassleriana HOM05D006131 ORTHO05D008649 3.6e-130 469.2 559 48.8
Solyc02g080990.2 Solanum lycopersicum HOM05D006131 ORTHO05D008649 8.1e-130 468.0 559 48.3
Nitab4.5_0001409g0150 Nicotiana tabacum HOM05D006131 ORTHO05D008649 1.8e-129 466.8 559 47.9
Peaxi162Scf00178g00056 Petunia axillaris HOM05D006131 ORTHO05D008649 6.8e-129 464.9 563 48.7
vmacro03670 Vaccinium macrocarpon HOM05D006131 ORTHO05D008649 2.0e-128 463.4 564 48.0
Aa31LG9G9850 Aethionema arabicum HOM05D006131 ORTHO05D008649 3.4e-128 462.6 562 48.0
Thecc.06G226400 Theobroma cacao HOM05D006131 ORTHO05D008649 4.4e-128 462.2 373 63.5
ATR0317G053 Amborella trichopoda HOM05D006131 ORTHO05D008649 7.6e-128 461.5 554 48.0
BolC3t15934H Brassica oleracea HOM05D006131 ORTHO05D008649 9.9e-128 461.1 554 48.7
Eucgr.E03997 Eucalyptus grandis HOM05D006131 ORTHO05D008649 9.9e-128 461.1 563 47.2
A03p29960 Brassica napus HOM05D006131 ORTHO05D008649 3.8e-127 459.1 559 48.1
Thhalv10028396m.g Eutrema salsugineum HOM05D006131 ORTHO05D008649 3.8e-127 459.1 559 47.2
BraA03t12185Z Brassica rapa HOM05D006131 ORTHO05D008649 4.9e-127 458.8 559 48.1
C03p36250 Brassica napus HOM05D006131 ORTHO05D008649 1.1e-126 457.6 554 48.6
Sp6g04490 Schrenkiella parvula HOM05D006131 ORTHO05D008649 1.1e-126 457.6 557 49.2
Lsat_1_v5_gn_4_61541 Lactuca sativa HOM05D006131 ORTHO05D008649 4.2e-126 455.7 566 46.8
SGA_v2.0_scaffold7G03775 Striga asiatica HOM05D006131 ORTHO05D008649 1.2e-125 454.1 528 49.6
AL6G47890 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 1.6e-125 453.8 569 47.5
AL6G47902 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 1.6e-125 453.8 569 47.5
AT4G04350 Arabidopsis thaliana HOM05D006131 ORTHO05D008649 4.6e-125 452.2 561 47.8
Oeu051199.1 Olea europaea HOM05D006131 ORTHO05D008649 4.6e-125 452.2 603 45.8
CARHR253090 Cardamine hirsuta HOM05D006131 ORTHO05D008649 6.0e-125 451.8 564 47.5
MELO3C007414.2 Cucumis melo HOM05D006131 ORTHO05D008649 3.0e-124 449.5 559 47.6
Carub.0006s3219 Capsella rubella HOM05D006131 ORTHO05D008649 8.7e-124 448.0 559 46.5
Migut.M01378 Erythranthe guttata HOM05D006131 ORTHO05D008649 2.5e-123 446.4 559 47.0
Aqoxy2G02318 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 4.8e-122 442.2 373 59.5
Os01g0120300 Oryza sativa ssp. japonica HOM05D006131 ORTHO05D008649 4.2e-118 429.1 554 44.9
DCAR_028357 Daucus carota HOM05D006131 ORTHO05D008649 3.0e-116 422.9 614 42.3
Zm00001eb334790 Zea mays HOM05D006131 ORTHO05D008649 2.5e-115 419.9 554 44.0
SalBow8G4181 Salvia bowleyana HOM05D006131 ORTHO05D008649 5.6e-115 418.7 551 46.3
AagrBONN_evm.TU.Sc2ySwM_362.2691 Anthoceros agrestis HOM05D006131 ORTHO05D008649 1.4e-113 414.1 558 44.8
CDE04G1529 Ceratophyllum demersum HOM05D006131 ORTHO05D008649 2.0e-112 410.2 375 56.3
HPP92_003825 Vanilla planifolia HOM05D006131 ORTHO05D008649 1.7e-111 407.1 535 44.9
COL.COLO4_31819 Corchorus olitorius HOM05D006131 ORTHO05D008649 7.1e-110 401.7 413 55.0
Pp3c7_13710 Physcomitrium patens HOM05D006131 ORTHO05D008649 7.1e-110 401.7 556 44.2
ECA234G4389 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.5e-109 399.4 518 46.5
Mapoly0024s0038 Marchantia polymorpha HOM05D006131 ORTHO05D008649 1.9e-107 393.7 555 41.1
CAN.G1014.35 Capsicum annuum HOM05D006131 ORTHO05D008649 4.2e-102 375.9 409 52.1
unitig_748.g7594 Utricularia gibba HOM05D006131 ORTHO05D008649 3.0e-100 369.8 547 44.4
BcaB01g02598 Brassica carinata HOM05D006131 ORTHO05D008649 2.5e-99 366.7 559 41.7
CSS0007614 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 6.5e-95 352.1 391 52.4
Glyma.17G010750 Glycine max HOM05D006131 ORTHO05D008649 4.5e-88 329.3 367 51.8
SEGI_37859 Sequoiadendron giganteum HOM05D006131 ORTHO05D008649 6.1e-85 318.9 323 51.1
Cre13.g578451 Chlamydomonas reinhardtii HOM05D006131 ORTHO05D008649 8.8e-84 315.1 374 45.2
PRCOL_00006602 Prasinoderma coloniale HOM05D006131 ORTHO05D008649 1.5e-83 314.3 379 45.4
MCO01G222 Micromonas commoda HOM05D006131 ORTHO05D008649 2.8e-82 310.1 465 40.6
CBR_g51980 Chara braunii HOM05D006131 ORTHO05D008649 1.4e-76 291.2 401 41.4
Dinv20096 Davidia involucrata HOM05D006131 ORTHO05D008649 7.2e-70 268.9 266 53.4
Lj1A1234T51 Lonicera japonica HOM05D006131 ORTHO05D008649 3.1e-49 200.3 492 34.6
ATR0317G081 Amborella trichopoda HOM05D006131 ORTHO05D064775 1.1e-41 175.3 131 65.6
MBI07_g07142_MAGBIO Magnolia biondii HOM05D006131 ORTHO05D008649 7.0e-41 172.6 261 42.1
Aqoxy144s008 Aquilegia oxysepala HOM05D006131 ORTHO05D077905 2.3e-31 141.0 270 36.3
Cfa023421 Carpinus fangiana HOM05D006131 ORTHO05D123919 3.9e-31 140.2 383 27.4
CAN.G1014.36 Capsicum annuum HOM05D006131 ORTHO05D008649 4.9e-26 123.2 71 77.5
Aqoxy1G02884 Aquilegia oxysepala HOM05D006131 ORTHO05D078484 3.5e-16 90.5 47 85.1
Oeu051886.1 Olea europaea HOM05D006131 ORTHO05D021223 8.6e-15 85.9 76 56.6
SalBow1G5129 Salvia bowleyana HOM05D002199 ORTHO05D016797 6.2e-13 79.7 48 72.9
SalBow1G8368 Salvia bowleyana HOM05D002199 ORTHO05D016797 6.2e-13 79.7 48 72.9
SalBow2G3407 Salvia bowleyana HOM05D006131 ORTHO05D016797 6.2e-13 79.7 48 72.9
SalBow3G3473 Salvia bowleyana HOM05D002199 ORTHO05D016797 6.2e-13 79.7 48 72.9
SalBow6G4614 Salvia bowleyana HOM05D006131 ORTHO05D016797 1.1e-12 79.0 52 67.3
SalBow1G1795 Salvia bowleyana HOM05D002199 ORTHO05D016797 6.8e-12 76.3 48 68.8
SalBow1G4554 Salvia bowleyana HOM05D002199 ORTHO05D016797 6.8e-12 76.3 48 68.8
SalBow4G0667 Salvia bowleyana HOM05D002199 ORTHO05D016797 6.8e-12 76.3 48 68.8
SalBow6G1083 Salvia bowleyana HOM05D006131 ORTHO05D016797 9.9e-11 72.4 56 60.7
Aqoxy1G02886 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 2.2e-10 71.2 54 61.1
ATR0317G090 Amborella trichopoda HOM05D006131 ORTHO05D021223 1.0e-07 62.4 54 51.9
Nitab4.5_0004743g0060 Nicotiana tabacum HOM05D006131 ORTHO05D008649 5.1e-07 60.1 54 51.9
SEGI_30887 Sequoiadendron giganteum HOM05D006131 ORTHO05D008649 6.6e-07 59.7 54 51.9
CDE04G0704 Ceratophyllum demersum HOM05D006131 ORTHO05D008649 1.9e-06 58.2 54 50.0


User provided reference genes

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