Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 0.0e+00 1091.3 551 100.0
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 2.3e-243 845.5 543 75.9
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 1.7e-185 653.3 544 61.8
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.0e-182 642.5 550 59.8
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 8.6e-182 641.0 549 59.7
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 7.3e-181 637.9 547 59.6
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.4e-176 622.9 542 58.9
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.1e-175 619.8 542 58.7
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 5.1e-166 588.6 563 56.5
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 1.7e-161 573.5 551 55.5
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 8.4e-161 571.2 548 55.7
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 1.1e-160 570.9 537 54.4
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 7.1e-160 568.2 540 53.3
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 1.2e-159 567.4 546 55.9
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 1.2e-159 567.4 537 55.3
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 1.6e-159 567.0 547 53.9
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 2.7e-159 566.2 546 52.2
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 1.8e-155 553.5 545 52.7
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 3.1e-155 552.7 546 52.2
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 6.9e-155 551.6 543 52.9
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 1.5e-154 550.4 544 52.4
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 7.6e-154 548.1 538 53.5
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 7.6e-154 548.1 556 53.2
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 1.3e-153 547.4 545 52.1
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 2.9e-153 546.2 539 51.9
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 3.8e-153 545.8 545 51.6
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 4.9e-153 545.4 535 52.9
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 7.9e-151 538.1 548 52.7
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 1.3e-150 537.3 553 49.9
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 6.7e-150 535.0 543 50.5
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 8.7e-150 534.6 539 52.9
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.5e-149 533.9 541 51.4
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 3.3e-149 532.7 550 50.9
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.3e-148 530.8 541 51.0
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.3e-148 530.8 540 51.9
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 4.8e-148 528.9 543 49.5
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 1.4e-147 527.3 539 51.4
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 5.3e-147 525.4 552 50.9
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 1.3e-145 520.8 542 49.1
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 2.2e-145 520.0 538 50.7
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 8.4e-145 518.1 547 50.3
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 4.2e-144 515.8 543 49.9
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 1.6e-143 513.8 536 49.6
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 2.7e-143 513.1 548 50.2
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 2.7e-143 513.1 542 47.8
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 8.7e-142 508.1 541 51.8
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 1.5e-141 507.3 536 50.6
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 7.4e-141 505.0 542 50.7
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.1e-140 503.4 548 49.8
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 2.8e-140 503.1 536 49.6
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 4.8e-140 502.3 542 50.4
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.4e-139 500.7 547 49.9
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 1.8e-139 500.4 542 49.3
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 4.0e-139 499.2 558 50.9
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 1.2e-138 497.7 543 49.4
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 1.0e-137 494.6 541 49.7
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.3e-137 494.2 546 48.0
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 8.4e-137 491.5 543 48.1
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 4.2e-136 489.2 537 48.4
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 9.3e-136 488.0 565 45.8
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 1.6e-135 487.3 565 46.0
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 4.6e-135 485.7 545 48.3
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 1.3e-134 484.2 545 47.5
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 2.3e-134 483.4 545 48.8
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 8.2e-132 474.9 541 47.5
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 3.1e-131 473.0 557 45.8
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 4.1e-131 472.6 476 54.8
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 5.9e-130 468.8 546 47.1
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 1.0e-129 468.0 562 44.8
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 2.9e-129 466.5 533 47.8
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.6e-127 460.7 542 46.3
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 7.9e-127 458.4 470 52.1
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 1.3e-126 457.6 580 45.0
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 4.3e-125 452.6 547 46.8
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 6.3e-124 448.7 547 46.1
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 1.8e-123 447.2 564 46.3
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 4.1e-123 446.0 555 46.7
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 9.1e-123 444.9 565 45.1
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 2.6e-122 443.4 546 45.6
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 5.0e-121 439.1 558 45.0
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 1.2e-119 434.5 544 44.5
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 2.1e-119 433.7 544 44.5
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 2.3e-118 430.3 554 44.8
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 1.1e-117 427.9 545 46.1
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 2.2e-116 423.7 545 44.6
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 3.1e-115 419.9 537 43.2
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 5.3e-115 419.1 544 44.7
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 1.2e-114 417.9 545 44.8
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 6.5e-113 412.1 586 41.6
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 1.2e-111 407.9 539 43.0
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 2.3e-110 403.7 539 42.1
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 1.7e-108 397.5 539 41.9
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 1.7e-108 397.5 539 41.9
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 1.7e-108 397.5 539 41.9
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 2.2e-108 397.1 555 41.6
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 2.2e-108 397.1 544 43.4
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 7.0e-107 392.1 539 42.7
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 1.6e-106 391.0 536 41.8
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 3.2e-104 383.3 524 42.7
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 3.6e-103 379.8 435 48.7
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 3.1e-99 366.7 438 46.3
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.8e-94 350.9 326 57.4
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 1.5e-85 321.2 556 37.1
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 1.4e-83 314.7 499 40.7
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 1.3e-81 308.1 454 41.4
Solyc03g006177.2 Solanum lycopersicum HOM05D002338 ORTHO05D006102 6.6e-81 305.8 336 49.4
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 2.3e-78 297.4 297 50.2
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 2.2e-76 290.8 585 35.0
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 1.1e-75 288.5 621 32.5
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 5.0e-73 279.6 325 47.1
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 2.6e-69 267.3 287 49.5
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 2.6e-69 267.3 433 40.6
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 1.8e-62 244.6 226 55.8
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 8.3e-60 235.7 338 45.6
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 4.3e-56 223.4 581 31.7
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 1.3e-52 211.8 583 29.5
C03p80710 Brassica napus HOM05D002338 ORTHO05D006102 1.4e-43 181.8 302 38.1
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 4.2e-43 180.3 396 31.1
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 1.7e-41 174.9 200 43.5
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 3.0e-41 174.1 569 26.7
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 9.0e-38 162.5 542 27.5
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 1.1e-32 145.6 306 32.4
BolC3t20316H Brassica oleracea HOM05D002338 ORTHO05D006102 6.2e-31 139.8 123 58.5
Psat6g197040 Pisum sativum HOM05D002338 ORTHO05D006102 1.7e-28 131.7 210 34.8
Atru.chr10.1674 Acer truncatum HOM05D002338 ORTHO05D006102 4.0e-22 110.5 101 53.5
TAR627G0992 Trochodendron aralioides HOM05D002338 ORTHO05D006102 4.0e-22 110.5 141 42.6
FvH4_3g07850 Fragaria vesca HOM05D009570 ORTHO05D009451 2.9e-20 104.4 95 51.6
FAN05G0140 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.9e-19 101.7 202 34.2
FAN05G0862 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.2e-19 100.9 202 34.2
BcaNung03636 Brassica carinata HOM05D002338 ORTHO05D006102 1.6e-18 98.6 104 44.2
Solyc05g023840.1 Solanum lycopersicum HOM05D002338 ORTHO05D006102 2.7e-18 97.8 129 40.3
BcaNung03637 Brassica carinata HOM05D002338 ORTHO05D006102 6.0e-18 96.7 209 31.6
SEGI_36544 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 3.3e-16 90.9 195 33.3
FAN14G0023 Fragaria x ananassa HOM05D002338 ORTHO05D006102 5.7e-16 90.1 152 40.8
FAN06G1043 Fragaria x ananassa HOM05D002338 ORTHO05D006102 9.0e-14 82.8 86 46.5
Sc05g0007150 Simmondsia chinensis HOM05D002338 ORTHO05D006102 9.0e-14 82.8 69 60.9
Os08g0532500 Oryza sativa ssp. japonica HOM05D002338 ORTHO05D006102 1.5e-13 82.0 203 32.0
FAN02G2027 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.3e-09 68.2 48 60.4
Actinidia16798 Actinidia chinensis HOM05D002338 ORTHO05D006102 5.1e-09 67.0 159 32.1
FAN14G1453 Fragaria x ananassa HOM05D002338 ORTHO05D006102 5.1e-09 67.0 53 66.0
FAN10G3983 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.5e-08 64.7 60 45.0
AagrBONN_evm.TU.Sc2ySwM_228.5644 Anthoceros agrestis HOM05D002702 ORTHO05D003416 5.7e-08 63.5 279 24.4
TPR.G39999 Trifolium pratense HOM05D002338 ORTHO05D006102 5.7e-08 63.5 55 45.5
PSO170G0409 Papaver somniferum HOM05D002702 ORTHO05D003416 7.4e-08 63.2 261 24.9
CsaV3_1G039340 Cucumis sativus L. HOM05D002702 ORTHO05D003416 1.7e-07 62.0 258 24.4
ATR0582G311 Amborella trichopoda HOM05D002338 ORTHO05D006102 2.2e-07 61.6 54 59.3
Pp3c8_20180 Physcomitrium patens HOM05D002702 ORTHO05D003416 2.2e-07 61.6 278 23.4
Potri.015G067500 Populus trichocarpa HOM05D001573 ORTHO05D001660 2.2e-07 61.6 211 24.6
Sabra16G0149300 Salix brachista HOM05D002702 ORTHO05D003416 2.8e-07 61.2 264 22.0
Duzib084G0591 Durio zibethinus HOM05D001573 ORTHO05D001660 3.7e-07 60.8 273 23.1
Aqoxy4G00362 Aquilegia oxysepala HOM05D002702 ORTHO05D003416 6.3e-07 60.1 262 23.3
MSTRG.26127 Avicennia marina HOM05D001573 ORTHO05D001660 6.3e-07 60.1 299 22.4
FAN18G3773 Fragaria x ananassa HOM05D002702 ORTHO05D003416 8.2e-07 59.7 262 24.4
FvH4_5g32090 Fragaria vesca HOM05D002702 ORTHO05D003416 1.8e-06 58.5 269 23.4
Potri.001G246100 Populus trichocarpa HOM05D002702 ORTHO05D003416 3.1e-06 57.8 314 20.4
TWI15G1127 Tripterygium wilfordii HOM05D001573 ORTHO05D001660 5.3e-06 57.0 291 22.0
CBR_g34074 Chara braunii HOM05D000019 ORTHO05D000002 6.9e-06 56.6 106 32.1
PRCOL_00005646 Prasinoderma coloniale HOM05D002702 ORTHO05D003416 9.1e-06 56.2 336 21.4


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