Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 4.1e-99 364.8 192 100.0
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 3.8e-28 129.0 191 44.0
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 5.5e-27 125.2 191 45.0
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 1.6e-26 123.6 192 45.8
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 3.6e-26 122.5 192 42.2
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 1.2e-24 117.5 188 43.6
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.7e-23 113.6 187 43.9
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 1.8e-22 110.2 193 40.9
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 6.1e-18 95.1 195 36.9
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 1.9e-11 73.6 126 45.2
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 4.3e-11 72.4 158 36.7
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 1.2e-10 70.9 111 36.9
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 1.6e-10 70.5 165 32.7
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 3.6e-10 69.3 145 33.1
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 8.0e-10 68.2 144 38.9
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 1.0e-09 67.8 148 38.5
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 1.4e-09 67.4 127 37.8
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 1.4e-09 67.4 140 34.3
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 1.8e-09 67.0 138 37.0
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 1.8e-09 67.0 145 35.2
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 1.8e-09 67.0 144 34.7
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 2.3e-09 66.6 128 37.5
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 3.1e-09 66.2 146 34.2
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 3.1e-09 66.2 133 36.1
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 4.0e-09 65.9 146 33.6
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 4.0e-09 65.9 146 33.6
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 4.0e-09 65.9 134 36.6
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 4.0e-09 65.9 125 38.4
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 5.2e-09 65.5 146 34.9
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 5.2e-09 65.5 148 33.8
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 5.2e-09 65.5 148 33.8
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 5.2e-09 65.5 138 36.2
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 5.2e-09 65.5 147 34.7
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 5.2e-09 65.5 139 36.0
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 5.2e-09 65.5 139 36.0
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 5.2e-09 65.5 116 37.9
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 6.8e-09 65.1 103 38.8
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 6.8e-09 65.1 142 35.9
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 8.9e-09 64.7 144 36.1
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 8.9e-09 64.7 134 35.8
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 8.9e-09 64.7 142 33.8
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 8.9e-09 64.7 152 34.2
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 1.2e-08 64.3 106 38.7
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.2e-08 64.3 142 35.2
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 1.2e-08 64.3 123 36.6
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 1.2e-08 64.3 121 33.1
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 1.2e-08 64.3 142 36.6
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 1.5e-08 63.9 167 34.1
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.5e-08 63.9 103 38.8
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 1.5e-08 63.9 103 38.8
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 1.5e-08 63.9 103 38.8
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 1.5e-08 63.9 144 34.7
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 1.5e-08 63.9 129 39.5
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 2.0e-08 63.5 114 36.0
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 2.0e-08 63.5 143 35.7
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 2.0e-08 63.5 135 36.3
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 2.0e-08 63.5 145 33.1
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.6e-08 63.2 141 34.0
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 2.6e-08 63.2 117 35.9
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 2.6e-08 63.2 140 32.9
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 2.6e-08 63.2 142 35.2
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 3.4e-08 62.8 145 33.1
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 3.4e-08 62.8 117 35.9
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 3.4e-08 62.8 122 35.2
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 3.4e-08 62.8 144 33.3
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 3.4e-08 62.8 149 32.9
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 3.4e-08 62.8 118 39.8
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 4.4e-08 62.4 147 34.7
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 4.4e-08 62.4 140 32.9
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 4.4e-08 62.4 140 32.9
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 4.4e-08 62.4 108 40.7
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 5.8e-08 62.0 145 35.2
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 5.8e-08 62.0 145 35.2
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 5.8e-08 62.0 145 35.2
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 5.8e-08 62.0 145 35.2
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 5.8e-08 62.0 115 36.5
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 5.8e-08 62.0 145 35.2
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 5.8e-08 62.0 120 35.0
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 5.8e-08 62.0 144 36.8
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 5.8e-08 62.0 114 30.7
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 7.5e-08 61.6 138 33.3
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 7.5e-08 61.6 142 32.4
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 9.8e-08 61.2 117 35.0
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 9.8e-08 61.2 112 38.4
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 9.8e-08 61.2 141 32.6
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 9.8e-08 61.2 115 33.9
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 1.3e-07 60.8 118 34.7
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 1.3e-07 60.8 115 32.2
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 1.7e-07 60.5 103 36.9
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.7e-07 60.5 137 32.1
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.7e-07 60.5 125 37.6
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 2.2e-07 60.1 98 34.7
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 2.9e-07 59.7 123 33.3
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 2.9e-07 59.7 119 33.6
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 2.9e-07 59.7 122 33.6
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 2.9e-07 59.7 152 31.6
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 3.7e-07 59.3 141 32.6
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 3.7e-07 59.3 128 36.7
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 3.7e-07 59.3 167 30.5
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 4.9e-07 58.9 107 37.4
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 4.9e-07 58.9 140 32.1
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 4.9e-07 58.9 119 38.7
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 6.4e-07 58.5 138 32.6
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 6.4e-07 58.5 116 34.5
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 6.4e-07 58.5 140 31.4
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 8.3e-07 58.2 137 32.1
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 8.3e-07 58.2 116 33.6
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 1.1e-06 57.8 117 36.8
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 1.4e-06 57.4 129 34.1
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.4e-06 57.4 135 33.3
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 1.4e-06 57.4 169 30.2
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 1.9e-06 57.0 171 27.5
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 1.9e-06 57.0 137 32.1
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 3.2e-06 56.2 182 28.0
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 4.1e-06 55.8 125 34.4
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 4.1e-06 55.8 112 34.8
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 5.4e-06 55.5 113 32.7
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 7.0e-06 55.1 115 33.9
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 9.2e-06 54.7 142 29.6
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 9.2e-06 54.7 147 32.0
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 9.2e-06 54.7 113 32.7


User provided reference genes

Program Settings