Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 0.0e+00 1931.0 1023 100.0
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 5.9e-43 180.6 421 37.3
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 1.0e-23 116.7 491 28.7
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 2.6e-14 85.5 321 27.1
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 9.8e-14 83.6 363 27.8
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.2e-13 82.4 297 30.6
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 3.7e-13 81.6 317 29.7
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 8.3e-13 80.5 328 29.6
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 2.4e-12 79.0 350 27.1
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.2e-12 78.6 297 30.0
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 4.1e-12 78.2 348 29.0
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.4e-12 77.8 325 28.0
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 5.4e-12 77.8 328 29.3
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 7.0e-12 77.4 325 28.0
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 7.0e-12 77.4 326 27.6
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 7.0e-12 77.4 317 28.7
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 7.0e-12 77.4 349 28.4
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.2e-11 76.6 302 27.5
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.1e-11 75.9 345 27.0
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 2.1e-11 75.9 325 28.9
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 2.7e-11 75.5 344 27.0
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 4.6e-11 74.7 323 26.9
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 6.0e-11 74.3 314 28.7
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 6.0e-11 74.3 347 28.5
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 7.8e-11 73.9 326 27.3
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 7.8e-11 73.9 355 31.5
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 1.0e-10 73.6 321 26.5
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 1.3e-10 73.2 347 27.7
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.3e-10 73.2 322 27.3
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.3e-10 73.2 345 27.5
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 1.7e-10 72.8 315 26.0
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.3e-10 72.4 346 28.3
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 2.3e-10 72.4 344 27.0
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 2.3e-10 72.4 321 28.0
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 2.3e-10 72.4 328 25.6
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 3.0e-10 72.0 362 25.7
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 3.0e-10 72.0 347 26.8
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 3.0e-10 72.0 315 26.0
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 5.1e-10 71.2 275 29.1
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 5.1e-10 71.2 347 26.5
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 6.6e-10 70.9 325 27.4
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 8.6e-10 70.5 310 28.1
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 8.6e-10 70.5 317 27.4
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 8.6e-10 70.5 334 28.1
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 1.1e-09 70.1 327 24.8
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.5e-09 69.7 336 26.2
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 1.9e-09 69.3 314 28.3
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 1.9e-09 69.3 327 26.6
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 2.5e-09 68.9 326 26.7
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 2.5e-09 68.9 351 27.1
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 3.3e-09 68.6 295 27.8
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 3.3e-09 68.6 313 24.6
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 4.3e-09 68.2 331 25.1
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 4.3e-09 68.2 314 24.5
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 4.3e-09 68.2 316 26.6
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 4.3e-09 68.2 321 29.0
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 4.3e-09 68.2 295 27.8
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 4.3e-09 68.2 343 24.8
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 5.6e-09 67.8 326 26.4
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 5.6e-09 67.8 314 26.1
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 9.5e-09 67.0 295 27.5
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 9.5e-09 67.0 357 26.3
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 9.5e-09 67.0 330 26.4
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 9.5e-09 67.0 297 25.9
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 1.2e-08 66.6 310 28.7
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.6e-08 66.2 330 26.1
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.1e-08 65.9 328 25.0
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.1e-08 65.9 349 28.7
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 2.1e-08 65.9 324 26.9
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.8e-08 65.5 297 25.6
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 2.8e-08 65.5 289 27.3
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 3.6e-08 65.1 278 26.3
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 3.6e-08 65.1 343 25.9
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 3.6e-08 65.1 329 24.6
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 3.6e-08 65.1 334 26.3
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 4.7e-08 64.7 314 26.1
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 4.7e-08 64.7 291 24.1
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 6.2e-08 64.3 313 24.9
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 6.2e-08 64.3 346 24.9
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 8.1e-08 63.9 317 28.1
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.1e-07 63.5 346 24.0
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 2.3e-07 62.4 297 25.3
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 3.1e-07 62.0 326 24.5
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 4.0e-07 61.6 312 24.7
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 4.0e-07 61.6 326 27.9
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.0e-07 61.6 342 27.5
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 5.2e-07 61.2 314 26.4
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 6.8e-07 60.8 328 25.3
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 8.9e-07 60.5 300 25.0
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.2e-06 60.1 309 25.6
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.5e-06 59.7 68 50.0
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 2.6e-06 58.9 334 24.6
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 4.4e-06 58.2 350 24.6
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 4.4e-06 58.2 321 25.2
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 9.9e-06 57.0 293 25.6
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 9.9e-06 57.0 346 25.1
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 9.9e-06 57.0 326 26.1


User provided reference genes

Program Settings