Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G547 Micromonas commoda HOM05D006443 ORTHO05D007797 2.7e-70 268.5 126 100.0
Pp3c15_20640 Physcomitrium patens HOM05D006443 ORTHO05D007797 8.1e-27 124.0 127 44.9
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 2.4e-26 122.5 126 46.0
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 3.1e-26 122.1 126 45.2
Cre06.g278198 Chlamydomonas reinhardtii HOM05D006443 ORTHO05D007797 4.0e-26 121.7 130 45.4
Mapoly0036s0054 Marchantia polymorpha HOM05D006443 ORTHO05D007797 5.2e-26 121.3 130 47.7
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 5.2e-26 121.3 126 46.0
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis HOM05D006443 ORTHO05D007797 8.9e-26 120.6 126 46.0
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 8.9e-26 120.6 126 44.4
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 8.9e-26 120.6 128 46.1
SMO196G0120 Selaginella moellendorffii HOM05D006443 ORTHO05D007797 1.2e-25 120.2 127 45.7
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 1.5e-25 119.8 129 45.7
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 2.0e-25 119.4 124 45.2
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 2.6e-25 119.0 126 45.2
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 3.4e-25 118.6 128 45.3
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 3.4e-25 118.6 126 45.2
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 3.4e-25 118.6 126 45.2
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 3.4e-25 118.6 129 45.7
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 4.4e-25 118.2 127 44.9
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 4.4e-25 118.2 124 46.0
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 4.4e-25 118.2 126 44.4
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 5.8e-25 117.9 126 46.8
SEGI_28427 Sequoiadendron giganteum HOM05D006443 ORTHO05D007797 5.8e-25 117.9 126 44.4
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 5.8e-25 117.9 128 44.5
Zm00001eb169540 Zea mays HOM05D006443 ORTHO05D007797 5.8e-25 117.9 126 42.9
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 7.6e-25 117.5 127 44.1
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 7.6e-25 117.5 128 44.5
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 7.6e-25 117.5 126 45.2
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 9.9e-25 117.1 127 47.2
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 9.9e-25 117.1 127 45.7
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 9.9e-25 117.1 126 44.4
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 1.3e-24 116.7 128 45.3
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 1.7e-24 116.3 126 44.4
CsaV3_5G030250 Cucumis sativus L. HOM05D006443 ORTHO05D007797 1.7e-24 116.3 127 45.7
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 1.7e-24 116.3 127 46.5
Hma1.2p1_0065F.1_g035450 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 1.7e-24 116.3 127 46.5
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 1.7e-24 116.3 126 44.4
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 2.2e-24 115.9 125 44.8
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 2.2e-24 115.9 125 44.8
ATR0561G191 Amborella trichopoda HOM05D006443 ORTHO05D007797 2.9e-24 115.5 126 45.2
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 2.9e-24 115.5 128 44.5
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 2.9e-24 115.5 82 61.0
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 3.8e-24 115.2 128 43.8
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 3.8e-24 115.2 126 43.7
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 3.8e-24 115.2 127 44.9
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 4.9e-24 114.8 128 45.3
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 4.9e-24 114.8 126 44.4
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 4.9e-24 114.8 128 44.5
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 4.9e-24 114.8 126 43.7
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 4.9e-24 114.8 126 42.9
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 4.9e-24 114.8 128 44.5
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 6.4e-24 114.4 125 44.8
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 6.4e-24 114.4 128 43.0
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 6.4e-24 114.4 126 44.4
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 6.4e-24 114.4 126 43.7
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 6.4e-24 114.4 128 43.8
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 6.4e-24 114.4 128 43.8
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 6.4e-24 114.4 82 58.5
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 6.4e-24 114.4 128 45.3
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 8.4e-24 114.0 124 43.5
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 8.4e-24 114.0 128 44.5
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 8.4e-24 114.0 82 61.0
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 8.4e-24 114.0 128 44.5
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 1.1e-23 113.6 132 42.4
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 1.1e-23 113.6 124 44.4
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 1.1e-23 113.6 124 44.4
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 1.1e-23 113.6 125 44.8
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 1.1e-23 113.6 126 43.7
CBR_g32330 Chara braunii HOM05D006443 ORTHO05D007797 1.1e-23 113.6 127 44.1
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 1.1e-23 113.6 126 42.9
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 1.9e-23 112.8 128 43.8
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.4e-23 112.5 128 43.8
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.4e-23 112.5 128 43.8
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 2.4e-23 112.5 128 43.0
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 3.2e-23 112.1 128 43.0
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 3.2e-23 112.1 128 43.0
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 3.2e-23 112.1 128 43.0
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 4.2e-23 111.7 128 43.0
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 4.2e-23 111.7 128 43.8
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 4.2e-23 111.7 128 43.8
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 4.2e-23 111.7 128 43.8
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 5.4e-23 111.3 124 43.5
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 5.4e-23 111.3 82 57.3
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 5.4e-23 111.3 82 58.5
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 7.1e-23 110.9 126 42.9
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 7.1e-23 110.9 126 41.3
TAR629G0791 Trochodendron aralioides HOM05D006443 ORTHO05D007797 7.1e-23 110.9 82 56.1
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 9.3e-23 110.5 127 42.5
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 9.3e-23 110.5 127 42.5
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 9.3e-23 110.5 82 57.3
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 9.3e-23 110.5 82 57.3
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 1.6e-22 109.8 82 56.1
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 2.1e-22 109.4 78 59.0
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 4.6e-22 108.2 78 57.7
Os11g0488500 Oryza sativa ssp. japonica HOM05D006443 ORTHO05D007797 4.6e-22 108.2 73 60.3
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 6.0e-22 107.8 82 57.3
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 7.8e-22 107.5 139 40.3
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 1.7e-21 106.3 128 42.2
DCAR_031204 Daucus carota HOM05D006443 ORTHO05D007797 2.5e-20 102.4 78 53.8
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 7.3e-20 100.9 72 56.9
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 9.6e-20 100.5 71 57.7
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 1.6e-19 99.8 73 56.2
PRCOL_00005324 Prasinoderma coloniale HOM05D006443 ORTHO05D007797 2.8e-19 99.0 121 45.5
Rhsim12G0099900 Rhododendron simsii HOM05D006443 ORTHO05D007797 2.8e-19 99.0 73 57.5
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 1.8e-18 96.3 80 52.5
ClCG11G013640 Citrullus lanatus HOM05D006443 ORTHO05D007797 3.8e-16 88.6 106 40.6
CSS0019305 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 7.9e-14 80.9 63 55.6
CSS0017614 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 2.3e-13 79.3 63 54.0
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 6.2e-11 71.2 94 36.2
Cfa001627 Carpinus fangiana HOM05D006443 ORTHO05D007797 1.1e-10 70.5 81 45.7
CSS0022605 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 5.3e-10 68.2 54 53.7
HanXRQChr09g0276521 Helianthus annuus HOM05D003341 ORTHO05D003603 1.4e-07 60.1 97 33.0
HanXRQChr09g0271981 Helianthus annuus HOM05D003341 ORTHO05D003603 1.9e-07 59.7 79 40.5
HanXRQChr16g0530111 Helianthus annuus HOM05D003341 ORTHO05D003603 3.2e-07 58.9 79 40.5
HanXRQChr09g0271961 Helianthus annuus HOM05D003341 ORTHO05D003603 1.6e-06 56.6 79 39.2
Eucgr.J02616 Eucalyptus grandis HOM05D003341 ORTHO05D003603 2.1e-06 56.2 79 38.0
Migut.I01109 Erythranthe guttata HOM05D003341 ORTHO05D003603 2.7e-06 55.8 80 36.2
GSVIVG01030225001 Vitis vinifera HOM05D003341 ORTHO05D003603 2.7e-06 55.8 79 38.0
Hund05719 Selenicereus undatus HOM05D003341 ORTHO05D003603 6.0e-06 54.7 79 39.2
VMungo0331G1094 Vigna mungo HOM05D003341 ORTHO05D003603 6.0e-06 54.7 80 33.8


User provided reference genes

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