Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 0.0e+00 1199.9 828 100.0
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 3.6e-30 137.9 601 30.0
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 7.9e-30 136.7 583 29.3
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 3.0e-29 134.8 583 28.6
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.5e-28 132.5 543 29.8
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.5e-28 132.5 565 28.3
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.5e-28 131.7 605 33.4
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 3.3e-28 131.3 582 29.0
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 4.3e-28 131.0 584 28.8
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 4.3e-28 131.0 583 28.1
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 5.7e-28 130.6 564 28.7
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 5.7e-28 130.6 587 29.5
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 5.7e-28 130.6 565 29.2
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 7.4e-28 130.2 583 30.2
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 7.4e-28 130.2 578 28.2
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 9.7e-28 129.8 582 29.0
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 9.7e-28 129.8 588 29.6
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.7e-27 129.0 565 28.7
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.7e-27 129.0 587 29.1
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.7e-27 129.0 554 30.5
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.2e-27 128.6 565 29.9
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 2.2e-27 128.6 559 28.4
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.2e-27 128.6 559 30.1
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.8e-27 127.5 587 28.8
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 6.3e-27 127.1 556 28.2
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-26 126.3 576 28.5
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.1e-26 126.3 594 30.3
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.4e-26 125.9 582 30.1
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.4e-26 125.9 566 29.9
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 2.4e-26 125.2 565 27.8
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 3.1e-26 124.8 615 31.4
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 3.1e-26 124.8 566 28.4
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 4.1e-26 124.4 583 29.3
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 5.3e-26 124.0 565 28.0
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 6.9e-26 123.6 565 29.4
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 6.9e-26 123.6 583 27.6
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 6.9e-26 123.6 583 29.2
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 9.1e-26 123.2 565 31.2
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 9.1e-26 123.2 580 28.4
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.2e-25 122.9 577 29.8
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 1.5e-25 122.5 565 28.3
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.5e-25 122.5 565 31.2
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 2.0e-25 122.1 566 27.9
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 2.0e-25 122.1 593 28.0
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 2.6e-25 121.7 583 29.3
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 3.4e-25 121.3 582 28.0
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 5.9e-25 120.6 583 30.7
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 7.7e-25 120.2 610 28.7
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 7.7e-25 120.2 565 31.0
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.7e-24 119.0 570 28.2
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 1.7e-24 119.0 564 28.9
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 2.2e-24 118.6 603 30.0
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.9e-24 118.2 582 29.0
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.9e-24 118.2 597 27.3
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 2.9e-24 118.2 583 30.2
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.8e-24 117.9 590 29.7
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 3.8e-24 117.9 602 27.2
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 8.5e-24 116.7 597 26.5
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.1e-23 116.3 570 28.1
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.1e-23 116.3 585 27.9
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 1.1e-23 116.3 584 30.1
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.9e-23 115.5 584 28.6
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.9e-23 115.5 584 28.6
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.5e-23 115.2 575 30.8
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 2.5e-23 115.2 546 32.8
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.5e-23 115.2 580 30.2
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.2e-23 114.8 583 29.2
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 5.5e-23 114.0 603 30.2
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 5.5e-23 114.0 583 28.8
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.5e-23 114.0 580 30.2
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.5e-23 114.0 615 28.0
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 5.5e-23 114.0 584 27.6
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 7.2e-23 113.6 583 28.8
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 7.2e-23 113.6 583 29.0
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 9.4e-23 113.2 582 28.9
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 9.4e-23 113.2 581 30.1
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 9.4e-23 113.2 582 26.3
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 9.4e-23 113.2 593 28.3
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 9.4e-23 113.2 597 28.8
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 9.4e-23 113.2 597 28.6
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.2e-22 112.8 583 27.3
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.6e-22 112.5 588 28.9
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.6e-22 112.5 599 27.4
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 1.6e-22 112.5 546 30.0
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.6e-22 112.5 632 27.4
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 2.1e-22 112.1 583 28.0
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 2.1e-22 112.1 583 30.2
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 2.7e-22 111.7 595 26.2
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 4.7e-22 110.9 575 28.7
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 4.7e-22 110.9 609 29.4
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 6.1e-22 110.5 583 28.1
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 7.9e-22 110.2 590 33.7
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 7.9e-22 110.2 582 28.5
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 1.0e-21 109.8 575 29.7
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 3.9e-21 107.8 583 28.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 6.7e-21 107.1 559 29.0
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 8.8e-21 106.7 593 28.0
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 8.8e-21 106.7 584 30.1
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 8.8e-21 106.7 583 28.1
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 8.8e-21 106.7 597 29.3
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.5e-20 105.9 583 29.0
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.5e-20 105.9 598 29.9
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 2.0e-20 105.5 563 29.5
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 2.6e-20 105.1 583 28.3
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 3.3e-20 104.8 581 29.8
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.7e-19 102.4 548 30.3
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 2.2e-19 102.1 589 28.5
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 3.7e-19 101.3 583 29.0
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 6.3e-19 100.5 587 29.1
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 1.4e-18 99.4 318 33.3
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 3.1e-18 98.2 622 27.0
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 5.3e-18 97.4 579 27.5
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 7.0e-18 97.1 589 28.4
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.0e-17 95.5 593 29.0
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 2.6e-17 95.1 583 26.4
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 7.7e-17 93.6 541 28.5
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.3e-16 92.8 600 27.5
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 3.8e-16 91.3 630 26.8
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.0e-16 90.9 568 25.7
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.5e-15 89.4 395 28.4
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.5e-15 89.4 597 26.5
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.2e-14 86.3 487 29.2
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.0e-13 83.2 351 29.3
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 1.1e-12 79.7 853 25.4
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 3.3e-12 78.2 822 25.3
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 4.4e-12 77.8 538 26.4
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 2.8e-11 75.1 592 27.2
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 6.3e-11 73.9 459 25.7
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 1.2e-09 69.7 584 24.0
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 3.5e-09 68.2 506 28.9
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 3.8e-08 64.7 390 26.4


User provided reference genes

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