Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 6.4e-165 583.9 282 100.0
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 6.1e-83 311.6 275 55.6
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 1.2e-75 287.3 271 52.4
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 2.1e-75 286.6 281 50.9
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 2.0e-73 280.0 279 51.3
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 1.3e-64 250.8 252 49.2
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 3.9e-61 239.2 335 41.2
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 5.8e-57 225.3 255 46.3
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 1.9e-55 220.3 255 43.9
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 2.4e-55 219.9 255 45.1
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 2.4e-55 219.9 255 44.7
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 5.4e-55 218.8 255 44.7
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 1.2e-54 217.6 253 44.7
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 2.1e-54 216.9 253 43.1
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.1e-54 216.9 255 44.3
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.7e-54 216.5 253 43.1
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 2.7e-54 216.5 253 45.5
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 2.7e-54 216.5 253 45.1
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 2.7e-54 216.5 255 44.3
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 4.6e-54 215.7 256 43.0
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 7.8e-54 214.9 256 45.3
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 7.8e-54 214.9 255 44.3
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 7.8e-54 214.9 255 44.7
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.3e-53 214.2 255 43.1
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 1.3e-53 214.2 279 41.6
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 1.7e-53 213.8 262 43.5
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 2.3e-53 213.4 253 44.3
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.3e-53 213.4 255 44.3
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 2.3e-53 213.4 274 41.2
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 3.0e-53 213.0 255 44.3
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 3.0e-53 213.0 253 41.9
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 3.9e-53 212.6 253 44.3
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 3.9e-53 212.6 255 42.7
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 5.1e-53 212.2 255 43.1
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 5.1e-53 212.2 255 43.1
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 5.1e-53 212.2 256 42.6
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 5.1e-53 212.2 253 42.7
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 6.6e-53 211.8 255 44.3
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 1.1e-52 211.1 254 42.5
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 1.5e-52 210.7 254 44.9
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 1.5e-52 210.7 257 44.7
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.5e-52 210.7 253 42.3
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 1.9e-52 210.3 255 43.1
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 1.9e-52 210.3 255 43.5
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 1.9e-52 210.3 253 43.9
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 2.5e-52 209.9 256 43.0
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 2.5e-52 209.9 254 44.1
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 3.3e-52 209.5 256 43.0
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 3.3e-52 209.5 256 43.4
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 7.3e-52 208.4 256 44.5
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 7.3e-52 208.4 255 41.6
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 7.3e-52 208.4 255 44.3
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 7.3e-52 208.4 248 41.5
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 9.5e-52 208.0 255 42.4
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.2e-51 207.6 255 41.6
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 1.2e-51 207.6 256 43.0
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.2e-51 207.6 254 42.1
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 1.2e-51 207.6 255 42.4
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 1.2e-51 207.6 256 42.6
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 1.2e-51 207.6 238 43.3
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.6e-51 207.2 255 42.7
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 1.6e-51 207.2 253 41.9
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 1.6e-51 207.2 247 43.3
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 2.1e-51 206.8 253 44.3
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 2.1e-51 206.8 255 43.1
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 2.1e-51 206.8 255 43.1
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 3.6e-51 206.1 255 41.6
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 3.6e-51 206.1 255 41.6
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 4.7e-51 205.7 255 42.4
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 6.2e-51 205.3 255 43.9
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 6.2e-51 205.3 255 42.4
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.1e-50 204.5 255 43.9
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 1.1e-50 204.5 255 42.4
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.1e-50 204.5 255 42.4
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.1e-50 204.5 255 43.1
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 1.4e-50 204.1 254 42.5
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.4e-50 204.1 253 45.1
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.8e-50 203.8 239 42.7
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 1.8e-50 203.8 256 42.6
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 1.8e-50 203.8 254 42.5
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 2.3e-50 203.4 255 42.4
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 2.3e-50 203.4 257 41.6
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 2.3e-50 203.4 254 42.1
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 2.3e-50 203.4 253 44.7
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 3.1e-50 203.0 255 42.7
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 4.0e-50 202.6 254 43.3
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 5.2e-50 202.2 255 42.0
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 5.2e-50 202.2 268 43.7
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 8.9e-50 201.4 287 40.8
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 2.6e-49 199.9 262 41.2
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 4.4e-49 199.1 255 42.0
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.2e-48 196.8 255 42.4
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 2.2e-48 196.8 236 41.9
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 2.2e-48 196.8 238 42.0
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 3.2e-47 193.0 223 44.4
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 5.4e-47 192.2 255 40.8
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 1.2e-46 191.0 255 40.8
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 3.5e-46 189.5 228 43.0
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 1.0e-45 188.0 290 36.9
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.6e-43 180.6 254 37.0
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.7e-43 179.1 293 37.2
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 2.0e-41 173.7 213 41.8
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 3.4e-41 172.9 213 43.2
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 5.8e-41 172.2 213 41.8
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 3.8e-40 169.5 255 37.6
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 2.8e-35 153.3 222 37.4
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 7.9e-30 135.2 267 34.8
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.4e-23 113.6 129 45.0
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.3e-21 107.8 113 46.9
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 1.5e-20 104.4 103 49.5
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 7.4e-20 102.1 135 36.3
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.3e-19 101.3 189 36.5
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 6.2e-19 99.0 81 51.9
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.4e-18 97.8 235 29.4
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.5e-12 77.0 87 46.0
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 2.5e-12 77.0 56 57.1
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 5.0e-08 62.8 73 39.7
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 2.1e-06 57.4 62 35.5
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.6e-06 56.2 76 38.2
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.6e-06 56.2 76 38.2


User provided reference genes

Program Settings