Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 0.0e+00 1372.8 764 100.0
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 6.8e-28 130.2 750 23.2
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 1.5e-27 129.0 749 23.9
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 2.4e-25 121.7 741 24.0
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 7.1e-25 120.2 741 23.5
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 5.1e-23 114.0 638 23.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 1.9e-22 112.1 739 22.2
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 4.3e-22 110.9 751 24.1
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 5.6e-22 110.5 739 23.7
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 1.3e-21 109.4 748 23.5
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.3e-21 109.4 411 28.5
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 1.6e-21 109.0 748 22.9
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.6e-21 109.0 467 26.3
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 2.1e-21 108.6 738 23.0
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-21 107.8 314 29.9
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 8.1e-21 106.7 740 24.2
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 1.4e-20 105.9 737 22.4
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 1.4e-20 105.9 737 22.5
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 1.8e-20 105.5 741 22.3
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.8e-20 105.5 486 25.9
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.4e-20 105.1 738 22.6
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 3.1e-20 104.8 677 22.6
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 4.0e-20 104.4 620 24.0
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 5.3e-20 104.0 746 24.3
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 9.0e-20 103.2 741 24.3
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.2e-19 102.8 743 23.8
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 1.2e-19 102.8 741 24.3
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 2.6e-19 101.7 741 22.8
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 2.6e-19 101.7 742 21.8
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 3.4e-19 101.3 619 23.3
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 4.4e-19 100.9 741 24.8
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 4.4e-19 100.9 304 28.6
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 5.8e-19 100.5 738 22.1
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 5.8e-19 100.5 737 22.3
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.3e-18 99.4 737 21.3
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 1.7e-18 99.0 591 23.4
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 2.9e-18 98.2 743 22.7
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 3.8e-18 97.8 309 26.9
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 3.8e-18 97.8 739 23.5
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 8.4e-18 96.7 636 23.1
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 8.4e-18 96.7 739 23.3
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 8.4e-18 96.7 741 23.5
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 1.9e-17 95.5 628 23.1
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.9e-17 95.5 747 23.4
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.9e-17 95.5 316 29.1
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 2.4e-17 95.1 756 22.8
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 2.4e-17 95.1 738 22.6
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 2.4e-17 95.1 742 22.4
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 4.2e-17 94.4 620 24.0
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 5.4e-17 94.0 731 22.2
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 5.4e-17 94.0 753 22.0
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 5.4e-17 94.0 745 24.0
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 5.4e-17 94.0 626 23.0
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 5.4e-17 94.0 474 26.4
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 7.1e-17 93.6 624 23.6
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 7.1e-17 93.6 305 27.5
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 9.3e-17 93.2 636 23.4
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 9.3e-17 93.2 636 23.4
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 9.3e-17 93.2 625 23.4
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 9.3e-17 93.2 475 25.1
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 1.2e-16 92.8 743 22.6
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.6e-16 92.4 742 22.5
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 2.1e-16 92.0 756 22.2
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 2.1e-16 92.0 630 23.7
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 2.1e-16 92.0 627 22.8
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 2.7e-16 91.7 738 22.0
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 3.5e-16 91.3 632 23.4
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 6.0e-16 90.5 632 23.4
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 7.8e-16 90.1 647 23.3
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.0e-15 89.7 626 22.5
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 1.3e-15 89.4 310 27.7
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 1.7e-15 89.0 621 22.7
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.7e-15 89.0 624 23.4
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 8.7e-15 86.7 633 23.5
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 1.9e-14 85.5 300 28.3
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 1.9e-14 85.5 470 24.5
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.9e-14 85.5 362 26.2
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 2.5e-14 85.1 745 22.8
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 2.5e-14 85.1 738 23.0
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 3.3e-14 84.7 625 22.2
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 3.3e-14 84.7 170 35.3
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 4.3e-14 84.3 354 27.7
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 5.6e-14 84.0 368 26.1
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 5.6e-14 84.0 740 21.2
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 7.3e-14 83.6 293 29.0
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 9.6e-14 83.2 711 21.9
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.3e-13 82.8 152 36.8
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.3e-13 82.8 743 22.6
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.1e-13 82.0 676 23.2
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 2.1e-13 82.0 746 24.0
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 2.8e-13 81.6 188 33.0
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 3.6e-13 81.3 626 22.4
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 4.8e-13 80.9 298 27.9
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 1.4e-12 79.3 144 36.1
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.4e-12 79.3 380 25.5
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 2.4e-12 78.6 624 22.3
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 2.4e-12 78.6 494 23.7
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 3.1e-12 78.2 622 23.2
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 4.0e-12 77.8 418 27.0
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 4.0e-12 77.8 641 22.0
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.3e-12 77.4 135 36.3
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 6.9e-12 77.0 303 26.7
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 6.9e-12 77.0 418 24.6
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 6.9e-12 77.0 748 21.7
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 9.0e-12 76.6 144 35.4
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.5e-11 75.9 738 21.8
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 2.6e-11 75.1 153 32.0
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.4e-11 74.7 676 23.2
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 3.4e-11 74.7 418 25.4
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 4.5e-11 74.3 470 24.0
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 4.5e-11 74.3 151 31.8
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 4.5e-11 74.3 479 24.2
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 7.6e-11 73.6 188 31.9
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 1.7e-10 72.4 395 27.1
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 3.8e-10 71.2 188 31.9
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 4.9e-10 70.9 622 24.0
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 6.4e-10 70.5 781 21.5
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 1.9e-09 68.9 187 29.9
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.9e-09 68.9 546 23.1
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 2.4e-09 68.6 636 22.0
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 4.2e-09 67.8 189 30.2
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.1e-09 67.0 616 23.2
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 6.0e-08 63.9 252 27.4
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 3.9e-07 61.2 591 21.5
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 1.5e-06 59.3 107 36.4
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.5e-06 59.3 120 34.2
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 1.9e-06 58.9 76 38.2
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.9e-06 58.9 85 42.4
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.9e-06 58.9 100 32.0
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 3.3e-06 58.2 555 21.8
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.3e-06 57.8 123 35.0
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 9.6e-06 56.6 105 35.2


User provided reference genes

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