Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G101 Micromonas commoda HOM05D005410 ORTHO05D007394 6.3e-166 587.4 306 100.0
PRCOL_00004676 Prasinoderma coloniale HOM05D005410 ORTHO05D007394 7.6e-71 271.6 260 50.0
Cre01.g031100 Chlamydomonas reinhardtii HOM05D005410 ORTHO05D007394 2.5e-66 256.5 302 46.7
Prupe.6G002700 Prunus persica HOM05D005410 ORTHO05D007394 2.0e-47 193.7 260 41.2
SMO329G0030 Selaginella moellendorffii HOM05D005410 ORTHO05D007394 6.5e-46 188.7 257 39.7
PSO339G0242 Papaver somniferum HOM05D005410 ORTHO05D007394 1.1e-45 188.0 276 38.0
PSO384G0864 Papaver somniferum HOM05D005410 ORTHO05D007394 1.1e-45 188.0 276 38.0
SMO238G0020 Selaginella moellendorffii HOM05D005410 ORTHO05D007394 1.4e-45 187.6 257 39.3
HPP92_001905 Vanilla planifolia HOM05D005410 ORTHO05D007394 2.5e-45 186.8 278 38.1
vmacro17045 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 9.4e-45 184.9 268 39.2
Pp3c19_15590 Physcomitrium patens HOM05D005410 ORTHO05D007394 1.2e-44 184.5 285 38.6
Lalb_Chr12g0204581 Lupinus albus HOM05D005410 ORTHO05D007394 1.6e-44 184.1 263 38.4
FAN16G2022 Fragaria x ananassa HOM05D005410 ORTHO05D007394 2.7e-44 183.3 278 37.1
Atru.chr3.2102 Acer truncatum HOM05D005410 ORTHO05D007394 3.6e-44 183.0 259 38.2
Atru.chr3.2395 Acer truncatum HOM05D005410 ORTHO05D007394 3.6e-44 183.0 259 38.2
Nitab4.5_0006195g0040 Nicotiana tabacum HOM05D005410 ORTHO05D007394 3.6e-44 183.0 276 39.5
Actinidia16239 Actinidia chinensis HOM05D005410 ORTHO05D007394 4.7e-44 182.6 243 41.2
arahy.Tifrunner.gnm1.ann1.63K8WX Arachis hypogaea HOM05D005410 ORTHO05D007394 6.1e-44 182.2 246 39.4
FAN25G1403 Fragaria x ananassa HOM05D005410 ORTHO05D007394 6.1e-44 182.2 278 37.1
RcHm_v2.0_Chr5g0083861 Rosa chinensis HOM05D005410 ORTHO05D007394 6.1e-44 182.2 268 37.3
SEGI_35670 Sequoiadendron giganteum HOM05D005410 ORTHO05D007394 6.1e-44 182.2 246 40.2
CSS0020515 Camellia sinensis var. sinensis HOM05D005410 ORTHO05D007394 7.9e-44 181.8 255 39.2
MD03G1003100 Malus domestica HOM05D005410 ORTHO05D007394 7.9e-44 181.8 260 37.7
HanXRQChr07g0186621 Helianthus annuus HOM05D005410 ORTHO05D007394 1.0e-43 181.4 263 38.0
Oeu023977.1 Olea europaea HOM05D005410 ORTHO05D007394 1.0e-43 181.4 255 39.6
arahy.Tifrunner.gnm1.ann1.GYZC8Z Arachis hypogaea HOM05D005410 ORTHO05D007394 1.4e-43 181.0 246 39.4
CBR_g66797 Chara braunii HOM05D005410 ORTHO05D007394 1.4e-43 181.0 291 38.5
Migut.N00542 Erythranthe guttata HOM05D005410 ORTHO05D007394 1.4e-43 181.0 286 37.8
Oeu023974.1 Olea europaea HOM05D005410 ORTHO05D007394 1.8e-43 180.6 255 39.6
DCAR_023818 Daucus carota HOM05D005410 ORTHO05D007394 2.3e-43 180.3 248 40.3
Potri.003G222200 Populus trichocarpa HOM05D005410 ORTHO05D007394 3.0e-43 179.9 246 39.4
SGA_v2.0_scaffold6G03314 Striga asiatica HOM05D005410 ORTHO05D007394 3.0e-43 179.9 287 37.6
Lj1A521T33 Lonicera japonica HOM05D005410 ORTHO05D007394 3.9e-43 179.5 255 38.8
Lj1A522T64 Lonicera japonica HOM05D005410 ORTHO05D007394 3.9e-43 179.5 255 38.8
Nitab4.5_0000551g0050 Nicotiana tabacum HOM05D005410 ORTHO05D007394 3.9e-43 179.5 287 38.3
PGR102G1996 Punica granatum HOM05D005410 ORTHO05D007394 5.1e-43 179.1 284 38.7
Cpa.g.sc119.36 Carica papaya HOM05D005410 ORTHO05D007394 6.7e-43 178.7 285 37.2
CiPaw.14G137400 Carya illinoinensis HOM05D005410 ORTHO05D007394 6.7e-43 178.7 260 37.7
Cc01_g00190 Coffea canephora HOM05D005410 ORTHO05D007394 8.8e-43 178.3 255 39.2
Manes.15G110100 Manihot esculenta HOM05D005410 ORTHO05D007394 8.8e-43 178.3 280 37.9
Rhsim13G0233300 Rhododendron simsii HOM05D005410 ORTHO05D007394 8.8e-43 178.3 243 40.3
SGA_v2.0_scaffold3G01679 Striga asiatica HOM05D005410 ORTHO05D007394 1.1e-42 177.9 306 37.6
CDE10G1105 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 1.5e-42 177.6 283 37.5
AUR62005847 Chenopodium quinoa HOM05D005410 ORTHO05D007394 1.5e-42 177.6 258 38.4
Lsat_1_v5_gn_6_55740 Lactuca sativa HOM05D005410 ORTHO05D007394 1.5e-42 177.6 280 37.5
Oeu060891.1 Olea europaea HOM05D005410 ORTHO05D007394 1.5e-42 177.6 243 39.1
TAR369G0462 Trochodendron aralioides HOM05D005410 ORTHO05D007394 2.0e-42 177.2 243 39.5
unitig_0.g1148 Utricularia gibba HOM05D005410 ORTHO05D007394 2.0e-42 177.2 292 39.0
Aqoxy1G00490 Aquilegia oxysepala HOM05D005410 ORTHO05D007394 2.6e-42 176.8 263 36.9
Dinv13479 Davidia involucrata HOM05D005410 ORTHO05D007394 2.6e-42 176.8 243 38.3
Medtr8g088420 Medicago truncatula HOM05D005410 ORTHO05D007394 2.6e-42 176.8 270 37.4
ATR0697G079 Amborella trichopoda HOM05D005410 ORTHO05D007394 3.3e-42 176.4 255 38.8
FvH4_3g45781 Fragaria vesca HOM05D005410 ORTHO05D007394 3.3e-42 176.4 278 35.6
FAN11G0543 Fragaria x ananassa HOM05D005410 ORTHO05D007394 3.3e-42 176.4 278 35.6
FAN11G0605 Fragaria x ananassa HOM05D005410 ORTHO05D007394 3.3e-42 176.4 278 35.6
Sc09g0000010 Simmondsia chinensis HOM05D005410 ORTHO05D007394 3.3e-42 176.4 263 38.4
CAN.G1834.14 Capsicum annuum HOM05D005410 ORTHO05D007394 4.4e-42 176.0 268 38.4
Gohir.A04G090700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 4.4e-42 176.0 277 36.8
CiPaw.13G177700 Carya illinoinensis HOM05D005410 ORTHO05D007394 5.7e-42 175.6 255 38.8
Ciclev10015873m.g Citrus clementina HOM05D005410 ORTHO05D007394 5.7e-42 175.6 243 39.1
MD11G1002900 Malus domestica HOM05D005410 ORTHO05D007394 5.7e-42 175.6 276 36.6
AUR62032839 Chenopodium quinoa HOM05D005410 ORTHO05D007394 7.4e-42 175.3 248 37.9
PGSC0003DMG400032122 Solanum tuberosum HOM05D005410 ORTHO05D007394 7.4e-42 175.3 258 38.8
Zm00001eb300990 Zea mays HOM05D005410 ORTHO05D007394 7.4e-42 175.3 257 36.6
Eucgr.J01758 Eucalyptus grandis HOM05D005410 ORTHO05D007394 9.7e-42 174.9 246 39.4
Mapoly0020s0152 Marchantia polymorpha HOM05D005410 ORTHO05D007394 1.3e-41 174.5 276 38.4
Haze_22935 Corylus avellana HOM05D005410 ORTHO05D007394 1.7e-41 174.1 243 39.1
Glyma.08G124900 Glycine max HOM05D005410 ORTHO05D007394 2.2e-41 173.7 259 37.8
Gorai.012G114400 Gossypium raimondii HOM05D005410 ORTHO05D007394 2.2e-41 173.7 277 36.1
COL.COLO4_07519 Corchorus olitorius HOM05D005410 ORTHO05D007394 2.8e-41 173.3 286 36.4
Gohir.D04G130700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 2.8e-41 173.3 277 36.1
Hund13622 Selenicereus undatus HOM05D005410 ORTHO05D007394 2.8e-41 173.3 280 37.1
Sopen01g001540 Solanum pennellii HOM05D005410 ORTHO05D007394 2.8e-41 173.3 278 37.4
MSTRG.12800 Avicennia marina HOM05D005410 ORTHO05D007394 3.7e-41 172.9 293 36.5
Sabra03G0165200 Salix brachista HOM05D005410 ORTHO05D007394 3.7e-41 172.9 298 36.2
Glyma.05G166800 Glycine max HOM05D005410 ORTHO05D007394 6.3e-41 172.2 259 37.5
Phvul.002G247200 Phaseolus vulgaris HOM05D005410 ORTHO05D007394 6.3e-41 172.2 259 37.1
Nn2g15872 Nelumbo nucifera HOM05D005410 ORTHO05D007394 8.2e-41 171.8 244 38.9
Carub.0001s4397 Capsella rubella HOM05D005410 ORTHO05D007394 1.1e-40 171.4 260 36.2
Duzib168G1987 Durio zibethinus HOM05D005410 ORTHO05D007394 1.4e-40 171.0 281 36.3
VMungo0251G1592 Vigna mungo HOM05D005410 ORTHO05D007394 1.4e-40 171.0 247 38.1
Lj4g0005740 Lotus japonicus HOM05D005410 ORTHO05D007394 3.1e-40 169.9 290 35.9
Sp1g41090 Schrenkiella parvula HOM05D005410 ORTHO05D007394 3.1e-40 169.9 258 36.0
AT1G55480 Arabidopsis thaliana HOM05D005410 ORTHO05D007394 4.1e-40 169.5 260 35.8
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 7.0e-40 168.7 257 36.2
QL01p010651 Quercus lobata HOM05D005410 ORTHO05D007394 7.0e-40 168.7 260 36.2
Thecc.09G203200 Theobroma cacao HOM05D005410 ORTHO05D007394 7.0e-40 168.7 298 34.6
AL1G63500 Arabidopsis lyrata HOM05D005410 ORTHO05D007394 1.2e-39 167.9 300 35.0
Aa31LG10G770 Aethionema arabicum HOM05D005410 ORTHO05D007394 1.5e-39 167.5 260 36.2
EL10Ac4g10389 Beta vulgaris HOM05D005410 ORTHO05D007394 1.5e-39 167.5 245 37.1
CANSAT11G0129 Cannabis sativa HOM05D005410 ORTHO05D007394 1.5e-39 167.5 293 35.2
CsaV3_4G017550 Cucumis sativus L. HOM05D005410 ORTHO05D007394 1.5e-39 167.5 280 34.6
CARHR045150 Cardamine hirsuta HOM05D005410 ORTHO05D007394 2.0e-39 167.2 298 34.2
SalBow3G3111 Salvia bowleyana HOM05D005410 ORTHO05D007394 2.0e-39 167.2 287 35.9
BcaC08g44199 Brassica carinata HOM05D005410 ORTHO05D007394 3.5e-39 166.4 262 35.1
Thhalv10011629m.g Eutrema salsugineum HOM05D005410 ORTHO05D007394 3.5e-39 166.4 260 35.0
Sed0021908 Sechium edule HOM05D005410 ORTHO05D007394 3.5e-39 166.4 286 35.7
ECA233G0964 Erigeron canadensis HOM05D005410 ORTHO05D007394 4.5e-39 166.0 294 34.4
TAR623G0245 Trochodendron aralioides HOM05D005410 ORTHO05D007394 4.5e-39 166.0 218 40.4
Os07g0171100 Oryza sativa ssp. japonica HOM05D005410 ORTHO05D007394 5.9e-39 165.6 219 38.4
GSVIVG01025488001 Vitis vinifera HOM05D005410 ORTHO05D007394 1.7e-38 164.1 216 40.3
MBI05_g04454_MAGBIO Magnolia biondii HOM05D005410 ORTHO05D007394 2.5e-37 160.2 304 35.5
BcaB02g10821 Brassica carinata HOM05D005410 ORTHO05D007394 1.6e-36 157.5 311 32.8
C06p16070 Brassica napus HOM05D005410 ORTHO05D007394 3.6e-36 156.4 309 33.3
BolC6t36806H Brassica oleracea HOM05D005410 ORTHO05D007394 3.6e-36 156.4 309 33.3
A05p17460 Brassica napus HOM05D005410 ORTHO05D007394 1.4e-35 154.5 312 32.7
BraA05t20641Z Brassica rapa HOM05D005410 ORTHO05D007394 1.4e-35 154.5 312 32.7
THA.LOC104810318 Tarenaya hassleriana HOM05D005410 ORTHO05D007394 3.9e-35 152.9 304 34.2
Peaxi162Scf00036g00221 Petunia axillaris HOM05D005410 ORTHO05D007394 2.0e-34 150.6 305 35.4
TPR.G6787 Trifolium pratense HOM05D005410 ORTHO05D007394 7.2e-29 132.1 222 34.7
Potri.001G002700 Populus trichocarpa HOM05D005410 ORTHO05D007394 3.0e-27 126.7 244 35.7
Cfa009554 Carpinus fangiana HOM05D005410 ORTHO05D007394 3.4e-26 123.2 201 36.3
arahy.Tifrunner.gnm1.ann1.CQ6EI1 Arachis hypogaea HOM05D005410 ORTHO05D007394 1.8e-24 117.5 246 31.7
Pp3c22_13930 Physcomitrium patens HOM05D005410 ORTHO05D007394 3.6e-20 103.2 278 30.2
Psat7g064320 Pisum sativum HOM05D005410 ORTHO05D007394 1.1e-16 91.7 165 35.8
vmacro04262 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 3.1e-16 90.1 213 31.9
Hma1.2p1_0256F.1_g103360 Hydrangea macrophylla HOM05D005410 ORTHO05D007394 4.1e-16 89.7 130 37.7
CDE10G0059 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 7.0e-16 89.0 76 52.6
Ciclev10018072m.g Citrus clementina HOM05D005410 ORTHO05D007394 1.2e-15 88.2 110 40.0
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 2.0e-15 87.4 206 30.6
Ah.06g190610 Amaranthus hybridus HOM05D005410 ORTHO05D007394 2.7e-15 87.0 133 38.3
Psat7g062240 Pisum sativum HOM05D005410 ORTHO05D007394 8.6e-14 82.0 184 29.3
EL10Ac8g20065 Beta vulgaris HOM05D005410 ORTHO05D007394 5.5e-13 79.3 135 34.1
Solyc01g005520.4 Solanum lycopersicum HOM05D005410 ORTHO05D007394 8.9e-11 72.0 138 31.2
AagrBONN_evm.TU.Sc2ySwM_117.774 Anthoceros agrestis HOM05D005410 ORTHO05D007394 1.2e-10 71.6 164 37.2
MELO3C014728.2 Cucumis melo HOM05D005410 ORTHO05D007394 4.4e-10 69.7 143 31.5
Cfa009551 Carpinus fangiana HOM05D005410 ORTHO05D007394 5.4e-08 62.8 63 46.0
Psat7g064400 Pisum sativum HOM05D005410 ORTHO05D007394 2.0e-07 60.8 154 31.8
BcaB04g16956 Brassica carinata HOM05D005410 ORTHO05D009181 3.9e-06 56.6 195 26.7


User provided reference genes

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