Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 3.3e-135 485.3 299 100.0
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 8.9e-32 141.7 304 32.9
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 1.2e-31 141.4 310 33.5
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 1.2e-31 141.4 310 33.5
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 2.6e-31 140.2 301 34.2
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 3.4e-31 139.8 301 34.2
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 4.4e-31 139.4 299 33.1
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 4.4e-31 139.4 299 33.1
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 9.8e-31 138.3 303 32.7
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 1.3e-30 137.9 300 33.0
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.2e-30 137.1 303 32.0
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 2.9e-30 136.7 306 32.0
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 3.7e-30 136.3 299 32.4
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 3.7e-30 136.3 293 32.1
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 3.7e-30 136.3 298 32.6
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 6.4e-30 135.6 297 31.6
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 6.4e-30 135.6 303 32.3
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 8.3e-30 135.2 303 31.0
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 1.4e-29 134.4 302 32.8
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 1.9e-29 134.0 297 32.3
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 2.4e-29 133.7 303 32.3
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.4e-29 133.7 301 30.9
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 3.2e-29 133.3 294 32.0
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 3.2e-29 133.3 308 32.1
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 4.1e-29 132.9 305 30.8
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 5.4e-29 132.5 294 31.6
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 5.4e-29 132.5 303 32.7
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 7.0e-29 132.1 303 32.3
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 9.2e-29 131.7 303 31.4
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 9.2e-29 131.7 301 30.2
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 9.2e-29 131.7 294 31.6
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.1e-28 130.6 300 29.7
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 2.1e-28 130.6 300 31.3
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 2.7e-28 130.2 300 31.7
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 2.7e-28 130.2 301 30.6
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 2.7e-28 130.2 294 31.6
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 3.5e-28 129.8 300 30.7
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 3.5e-28 129.8 300 32.0
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 3.5e-28 129.8 299 30.4
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 4.6e-28 129.4 294 32.0
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 4.6e-28 129.4 304 31.6
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 6.0e-28 129.0 297 31.6
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 6.0e-28 129.0 305 32.8
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 7.8e-28 128.6 300 31.3
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 1.0e-27 128.3 298 30.2
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 1.7e-27 127.5 304 31.9
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.7e-27 127.5 299 31.8
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 1.7e-27 127.5 301 30.2
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 2.3e-27 127.1 302 30.8
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 2.3e-27 127.1 289 32.5
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 2.3e-27 127.1 294 31.3
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 2.3e-27 127.1 297 31.0
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 3.9e-27 126.3 301 30.6
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 5.1e-27 125.9 303 30.0
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 5.1e-27 125.9 300 31.0
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 6.6e-27 125.6 300 30.7
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 8.6e-27 125.2 321 29.3
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 8.6e-27 125.2 298 32.2
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 1.1e-26 124.8 299 30.8
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.5e-26 124.4 296 31.4
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 1.5e-26 124.4 294 30.6
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.5e-26 124.4 322 32.3
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 1.5e-26 124.4 299 30.4
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 2.5e-26 123.6 296 31.1
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 2.5e-26 123.6 332 29.5
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 2.5e-26 123.6 299 30.1
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 5.6e-26 122.5 351 31.6
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 5.6e-26 122.5 306 30.1
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 5.6e-26 122.5 306 30.1
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 5.6e-26 122.5 305 30.5
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 7.3e-26 122.1 301 29.6
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 7.3e-26 122.1 304 30.6
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 2.3e-24 117.1 323 29.7
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 6.8e-24 115.5 302 30.1
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 6.8e-24 115.5 300 30.3
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 1.5e-23 114.4 310 29.4
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 3.4e-23 113.2 288 29.5
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 7.5e-23 112.1 329 28.3
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 1.7e-22 110.9 303 28.4
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.9e-22 110.2 286 30.8
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 6.4e-22 109.0 294 31.3
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.4e-21 107.8 331 28.1
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 4.1e-21 106.3 285 29.5
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 5.4e-21 105.9 344 27.9
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 5.4e-21 105.9 305 27.9
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 1.2e-20 104.8 208 33.7
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.6e-20 104.4 304 27.6
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.5e-20 103.2 263 29.3
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 6.0e-20 102.4 285 29.1
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 1.3e-19 101.3 337 27.3
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.7e-19 100.9 194 37.1
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 3.9e-19 99.8 206 33.0
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 5.1e-19 99.4 327 27.8
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.6e-19 99.0 206 34.0
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 1.1e-18 98.2 206 32.5
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 1.9e-18 97.4 206 33.5
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 4.3e-18 96.3 206 31.6
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 9.5e-18 95.1 358 24.0
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 9.5e-18 95.1 218 33.5
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 9.5e-18 95.1 206 31.1
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.2e-17 94.7 206 31.1
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 1.2e-17 94.7 206 31.1
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 1.6e-17 94.4 206 31.6
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 1.6e-17 94.4 269 27.1
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 2.1e-17 94.0 365 24.4
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 2.8e-17 93.6 256 30.1
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 2.8e-17 93.6 206 32.5
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 2.8e-17 93.6 207 30.4
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 6.2e-17 92.4 251 30.7
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 6.2e-17 92.4 359 24.2
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 6.2e-17 92.4 206 30.6
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 8.1e-17 92.0 191 30.4
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 8.1e-17 92.0 206 33.5
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 5.2e-16 89.4 206 30.6
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.2e-16 89.4 220 32.7
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 1.5e-15 87.8 206 30.1
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 1.5e-15 87.8 105 41.9
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 4.4e-15 86.3 252 28.6
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 1.9e-13 80.9 106 41.5
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 2.4e-13 80.5 106 38.7
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 5.4e-13 79.3 253 28.5
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 1.2e-12 78.2 236 31.8
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.6e-12 77.8 303 26.1
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.6e-12 77.8 300 24.7
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 3.5e-12 76.6 185 30.8
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 6.6e-11 72.4 145 33.1
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 6.9e-08 62.4 151 29.8


User provided reference genes

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