Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 1.2e-195 686.4 365 100.0
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 4.1e-39 166.4 391 34.3
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 3.4e-33 146.7 389 29.0
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 3.7e-32 143.3 291 32.6
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 2.4e-31 140.6 291 34.7
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 1.7e-29 134.4 289 33.9
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.8e-26 124.4 291 30.6
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 2.6e-25 120.6 292 33.9
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 2.6e-25 120.6 292 32.9
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 4.4e-25 119.8 291 30.9
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 1.2e-22 111.7 288 28.1
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 2.1e-22 110.9 291 29.9
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 1.3e-21 108.2 320 30.0
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 6.6e-21 105.9 289 30.4
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 8.9e-18 95.5 294 31.0
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 3.4e-17 93.6 295 27.5
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 1.7e-16 91.3 296 28.0
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 3.7e-16 90.1 287 28.9
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.9e-16 89.7 342 29.5
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 8.4e-16 89.0 287 28.6
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 1.1e-15 88.6 285 29.1
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 1.1e-15 88.6 287 28.6
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 1.9e-15 87.8 296 29.4
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 2.4e-15 87.4 285 29.1
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 3.2e-15 87.0 285 29.1
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 3.2e-15 87.0 284 28.9
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 3.2e-15 87.0 295 29.8
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 4.1e-15 86.7 283 29.3
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 5.4e-15 86.3 286 29.7
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 5.4e-15 86.3 284 28.2
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 5.4e-15 86.3 283 28.3
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 5.4e-15 86.3 114 40.4
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 5.4e-15 86.3 283 29.3
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 7.1e-15 85.9 287 28.2
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.2e-14 85.1 283 29.3
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.2e-14 85.1 283 29.0
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 2.1e-14 84.3 289 28.0
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 2.7e-14 84.0 291 27.8
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 3.5e-14 83.6 286 28.0
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 3.5e-14 83.6 287 30.0
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 4.6e-14 83.2 282 27.3
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 4.6e-14 83.2 286 28.0
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 6.0e-14 82.8 285 28.8
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 7.8e-14 82.4 293 27.6
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 1.0e-13 82.0 286 27.6
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 1.0e-13 82.0 292 27.7
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 1.3e-13 81.6 282 28.4
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.3e-13 81.6 289 28.0
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.3e-13 81.6 289 28.0
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.3e-13 81.6 290 26.9
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 3.0e-13 80.5 282 27.3
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 3.0e-13 80.5 290 28.6
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.0e-13 80.5 287 28.2
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 3.9e-13 80.1 286 27.3
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 3.9e-13 80.1 284 28.2
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 3.9e-13 80.1 285 27.7
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.9e-13 80.1 282 28.4
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 5.1e-13 79.7 286 27.3
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 5.1e-13 79.7 282 27.3
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 5.1e-13 79.7 287 27.2
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 5.1e-13 79.7 282 27.7
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 5.1e-13 79.7 287 29.3
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 6.6e-13 79.3 284 29.2
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 6.6e-13 79.3 286 27.6
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 6.6e-13 79.3 281 27.0
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 6.6e-13 79.3 282 27.0
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 6.6e-13 79.3 295 28.1
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.1e-12 78.6 282 25.9
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 1.5e-12 78.2 283 28.3
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 1.9e-12 77.8 287 28.2
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 1.9e-12 77.8 282 27.0
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 1.9e-12 77.8 179 35.2
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.3e-12 77.0 288 28.8
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 4.3e-12 76.6 285 26.7
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 5.6e-12 76.3 284 28.5
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 7.3e-12 75.9 283 27.2
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 7.3e-12 75.9 238 29.0
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 7.3e-12 75.9 283 26.9
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 7.3e-12 75.9 282 27.0
Cfa025520 Carpinus fangiana HOM05D003682 ORTHO05D004224 9.6e-12 75.5 270 26.7
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 9.6e-12 75.5 285 28.4
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 1.2e-11 75.1 284 27.1
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 1.6e-11 74.7 260 28.5
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 2.1e-11 74.3 285 28.4
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 2.1e-11 74.3 281 28.5
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 2.1e-11 74.3 285 27.0
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 2.1e-11 74.3 284 28.5
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 2.1e-11 74.3 284 27.1
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 2.8e-11 73.9 282 28.4
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 2.8e-11 73.9 285 26.3
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 2.8e-11 73.9 287 26.8
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 2.8e-11 73.9 282 27.3
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 2.8e-11 73.9 286 28.3
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 3.6e-11 73.6 287 28.6
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 3.6e-11 73.6 288 27.8
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 4.7e-11 73.2 283 27.9
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 8.1e-11 72.4 285 27.7
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 8.1e-11 72.4 286 27.6
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 1.4e-10 71.6 260 27.3
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 1.8e-10 71.2 285 25.6
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 1.8e-10 71.2 292 29.1
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 2.4e-10 70.9 288 27.4
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.0e-10 70.1 285 29.5
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 4.0e-10 70.1 259 27.0
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 6.8e-10 69.3 287 27.5
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.8e-10 69.3 131 33.6
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 8.9e-10 68.9 304 25.0
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 8.9e-10 68.9 284 27.8
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 8.9e-10 68.9 164 28.0
SEGI_02938 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 8.9e-10 68.9 99 34.3
SEGI_19039 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 8.9e-10 68.9 99 34.3
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 2.0e-09 67.8 283 27.6
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 2.6e-09 67.4 282 24.8
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 3.4e-09 67.0 217 23.0
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 3.4e-09 67.0 284 25.0
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 3.4e-09 67.0 285 27.7
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.4e-09 67.0 75 42.7
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.4e-09 66.6 284 28.5
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 7.6e-09 65.9 283 26.5
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 1.3e-08 65.1 93 38.7
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.7e-08 64.7 287 27.5
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 2.2e-08 64.3 284 26.4
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 2.2e-08 64.3 170 27.6
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.8e-08 63.5 142 27.5
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 3.8e-08 63.5 258 24.8
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.4e-08 62.8 271 28.0
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 6.4e-08 62.8 284 26.8
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 1.9e-07 61.2 460 24.1
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 4.2e-07 60.1 285 24.9
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 1.2e-06 58.5 284 23.9
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.7e-06 57.4 37 64.9
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 3.5e-06 57.0 243 30.0
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 7.8e-06 55.8 244 26.2


User provided reference genes

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