Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 7.7e-150 533.9 285 100.0
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 1.0e-37 161.4 205 46.3
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.5e-36 157.5 214 45.3
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 9.7e-36 154.8 214 43.9
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 1.7e-35 154.1 204 45.6
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 1.7e-35 154.1 260 42.3
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 2.8e-35 153.3 203 45.3
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 6.3e-35 152.1 203 44.8
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 6.3e-35 152.1 202 46.0
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 6.3e-35 152.1 204 44.6
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 8.2e-35 151.8 238 43.7
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 1.1e-34 151.4 204 46.1
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 1.4e-34 151.0 208 46.2
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 1.4e-34 151.0 204 43.6
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.4e-34 151.0 203 46.3
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 1.8e-34 150.6 204 44.6
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 1.8e-34 150.6 204 43.6
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 2.4e-34 150.2 202 45.5
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 3.1e-34 149.8 221 43.9
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 4.1e-34 149.4 213 42.3
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 4.1e-34 149.4 262 38.9
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 5.3e-34 149.1 209 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 9.1e-34 148.3 208 45.2
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 1.5e-33 147.5 212 42.9
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 2.0e-33 147.1 214 46.3
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 2.6e-33 146.7 257 40.5
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 3.4e-33 146.4 206 43.7
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 3.4e-33 146.4 219 42.5
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 4.5e-33 146.0 202 43.1
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 5.9e-33 145.6 209 42.6
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 5.9e-33 145.6 211 41.7
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 5.9e-33 145.6 217 41.5
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 5.9e-33 145.6 217 41.5
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 5.9e-33 145.6 203 42.9
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 5.9e-33 145.6 213 40.8
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 1.0e-32 144.8 208 43.8
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.0e-32 144.8 206 44.7
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 1.0e-32 144.8 204 45.6
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 1.3e-32 144.4 210 43.3
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 1.3e-32 144.4 213 42.7
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 1.3e-32 144.4 206 42.2
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 1.7e-32 144.1 209 44.0
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 1.7e-32 144.1 204 43.1
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 1.7e-32 144.1 290 39.7
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 1.7e-32 144.1 204 42.6
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 2.2e-32 143.7 262 38.5
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 2.2e-32 143.7 203 42.9
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 2.2e-32 143.7 280 37.5
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 2.9e-32 143.3 214 43.0
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 3.8e-32 142.9 206 44.2
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 3.8e-32 142.9 206 44.2
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 3.8e-32 142.9 274 38.7
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 5.0e-32 142.5 227 41.0
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 5.0e-32 142.5 211 42.7
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 8.5e-32 141.7 213 42.7
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 8.5e-32 141.7 211 42.7
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 8.5e-32 141.7 201 43.8
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 8.5e-32 141.7 207 44.0
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 1.1e-31 141.4 207 42.0
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 1.1e-31 141.4 214 42.1
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 1.4e-31 141.0 295 35.6
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 1.4e-31 141.0 290 36.2
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 1.4e-31 141.0 206 41.3
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 2.5e-31 140.2 209 41.1
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 2.5e-31 140.2 287 35.2
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 3.2e-31 139.8 209 41.1
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 3.2e-31 139.8 210 41.9
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 3.2e-31 139.8 235 40.4
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 4.2e-31 139.4 205 42.0
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 5.5e-31 139.0 207 42.0
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 5.5e-31 139.0 206 40.8
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 7.2e-31 138.7 208 41.3
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 7.2e-31 138.7 227 38.8
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 7.2e-31 138.7 212 42.5
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 7.2e-31 138.7 202 43.6
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 9.4e-31 138.3 258 38.8
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 9.4e-31 138.3 209 39.2
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 1.2e-30 137.9 208 41.3
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 1.2e-30 137.9 210 41.9
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 1.6e-30 137.5 220 40.5
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 1.6e-30 137.5 210 41.0
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 2.7e-30 136.7 210 41.0
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 3.6e-30 136.3 280 37.5
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 3.6e-30 136.3 211 41.2
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 4.7e-30 136.0 221 39.8
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 4.7e-30 136.0 206 41.7
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 7.9e-30 135.2 210 41.0
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 7.9e-30 135.2 211 41.2
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 7.9e-30 135.2 218 39.0
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 1.0e-29 134.8 209 40.2
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 1.0e-29 134.8 209 40.2
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 1.4e-29 134.4 271 38.0
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 1.4e-29 134.4 217 39.6
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 1.8e-29 134.0 211 40.8
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 2.3e-29 133.7 208 41.3
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 3.0e-29 133.3 209 38.8
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 6.7e-29 132.1 210 41.4
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 6.7e-29 132.1 214 40.7
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 8.8e-29 131.7 284 35.6
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 3.3e-28 129.8 227 41.4
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 4.4e-28 129.4 276 35.1
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 9.7e-28 128.3 195 41.5
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 2.2e-27 127.1 214 42.1
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 2.8e-27 126.7 230 39.1
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 6.3e-27 125.6 210 39.5
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 6.3e-27 125.6 212 38.7
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 2.0e-25 120.6 194 38.7
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 7.7e-25 118.6 203 38.9
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 8.5e-24 115.2 292 35.3
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 8.0e-22 108.6 202 37.1
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 2.0e-20 104.0 180 40.6
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 2.0e-20 104.0 180 40.6
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 2.6e-20 103.6 202 37.1
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 3.7e-19 99.8 237 35.0
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 4.8e-19 99.4 146 45.2
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 1.4e-18 97.8 185 36.2
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 1.2e-17 94.7 186 37.1
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 4.5e-17 92.8 140 43.6
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 5.9e-17 92.4 115 47.8
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 1.0e-16 91.7 132 45.5
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 5.0e-16 89.4 202 34.2
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 1.2e-14 84.7 176 36.9
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 3.6e-14 83.2 175 34.9
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 1.3e-11 74.7 199 34.2
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 1.2e-06 58.2 80 40.0
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.6e-06 57.8 132 34.1
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 2.7e-06 57.0 56 46.4


User provided reference genes

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