Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 4.9e-227 790.8 402 100.0
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 3.1e-48 196.8 390 33.6
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 4.5e-47 193.0 354 33.6
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 2.5e-45 187.2 387 32.8
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 3.2e-45 186.8 383 32.9
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 4.2e-45 186.4 413 33.4
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 5.5e-45 186.0 379 34.6
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 7.2e-45 185.7 396 33.1
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 6.1e-44 182.6 399 33.6
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 6.1e-44 182.6 376 33.8
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 8.0e-44 182.2 390 33.6
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 1.4e-43 181.4 407 32.2
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 2.3e-43 180.6 398 33.4
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 2.3e-43 180.6 400 31.8
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 2.3e-43 180.6 402 31.3
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 3.0e-43 180.3 395 31.6
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.0e-43 180.3 400 31.8
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 4.0e-43 179.9 405 34.3
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 6.8e-43 179.1 393 32.3
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 6.8e-43 179.1 407 32.2
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 8.8e-43 178.7 393 33.1
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 8.8e-43 178.7 397 32.2
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 8.8e-43 178.7 413 32.2
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.2e-42 178.3 399 31.1
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 1.2e-42 178.3 400 33.5
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 1.2e-42 178.3 394 32.5
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 1.5e-42 177.9 393 31.6
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 1.5e-42 177.9 393 33.1
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 1.5e-42 177.9 393 32.6
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 1.5e-42 177.9 395 32.4
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 2.0e-42 177.6 404 32.2
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 2.0e-42 177.6 393 32.3
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 2.6e-42 177.2 393 31.3
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 2.6e-42 177.2 405 31.9
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 3.4e-42 176.8 402 32.1
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 4.4e-42 176.4 398 32.7
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 4.4e-42 176.4 406 32.3
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 4.4e-42 176.4 395 32.2
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 5.7e-42 176.0 401 31.4
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 5.7e-42 176.0 401 32.4
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 9.8e-42 175.3 405 30.1
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 9.8e-42 175.3 356 33.7
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 9.8e-42 175.3 405 31.1
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 1.3e-41 174.9 399 32.1
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 1.7e-41 174.5 405 30.6
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 2.2e-41 174.1 395 31.6
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 2.2e-41 174.1 397 32.0
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 2.8e-41 173.7 395 31.6
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 2.8e-41 173.7 405 30.6
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 3.7e-41 173.3 406 32.5
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 8.3e-41 172.2 398 32.4
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 8.3e-41 172.2 401 31.7
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 1.1e-40 171.8 413 30.8
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.4e-40 171.4 402 32.8
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 1.4e-40 171.4 370 32.2
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.8e-40 171.0 390 33.3
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 1.8e-40 171.0 402 30.8
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 2.4e-40 170.6 395 33.9
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 3.1e-40 170.2 405 30.6
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 7.0e-40 169.1 387 32.3
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 7.0e-40 169.1 402 31.3
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 7.0e-40 169.1 412 31.1
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 9.1e-40 168.7 373 30.8
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 2.0e-39 167.5 378 31.7
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 2.0e-39 167.5 403 31.3
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 2.3e-38 164.1 399 29.6
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 5.0e-38 162.9 439 31.0
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 8.6e-38 162.2 365 33.7
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.1e-37 161.8 399 32.1
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 1.5e-37 161.4 383 31.6
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 3.2e-37 160.2 317 33.8
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 3.2e-37 160.2 405 29.1
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 5.5e-37 159.5 374 31.3
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 1.2e-36 158.3 463 27.2
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 1.5e-34 151.4 305 33.1
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 3.4e-34 150.2 440 31.8
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 4.4e-34 149.8 436 28.9
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 4.4e-34 149.8 326 31.3
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 9.8e-34 148.7 182 42.9
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 1.3e-33 148.3 321 33.3
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 2.8e-33 147.1 186 45.7
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 1.6e-31 141.4 183 40.4
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 5.9e-31 139.4 183 41.5
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 7.8e-31 139.0 186 40.9
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.3e-30 138.3 209 38.8
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 2.3e-30 137.5 199 37.7
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 6.6e-30 136.0 382 29.6
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 8.6e-30 135.6 182 41.2
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.1e-29 135.2 200 38.5
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 4.3e-29 133.3 408 27.9
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 7.3e-29 132.5 176 43.2
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 1.2e-26 125.2 184 39.7
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 2.0e-26 124.4 156 41.7
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 4.4e-26 123.2 304 30.6
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 7.5e-26 122.5 173 41.0
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 2.0e-23 114.4 164 38.4
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.0e-23 114.4 383 25.8
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.7e-22 111.3 131 44.3
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.3e-21 107.1 353 29.2
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 5.6e-21 106.3 195 34.4
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.2e-17 94.4 119 40.3
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.9e-17 94.0 106 46.2
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 2.7e-15 87.4 256 27.3
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 4.6e-15 86.7 198 31.3
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 2.3e-14 84.3 123 39.8
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 3.3e-13 80.5 76 46.1
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 5.6e-13 79.7 167 35.3
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.6e-12 78.2 361 24.9
PRCOL_00004583 Prasinoderma coloniale HOM05D000064 ORTHO05D025009 1.1e-11 75.5 381 25.2
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.3e-11 74.3 74 47.3
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 1.2e-10 72.0 79 44.3


User provided reference genes

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