Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G726 Micromonas commoda HOM05D005539 ORTHO05D006644 0.0e+00 1532.7 846 100.0
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 4.9e-19 100.9 758 23.4
Cre06.g278900 Chlamydomonas reinhardtii HOM05D005539 ORTHO05D006644 1.4e-18 99.4 295 28.1
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.9e-18 99.0 865 21.8
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 2.7e-17 95.1 791 22.5
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.7e-17 95.1 297 28.6
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.0e-16 93.2 296 28.0
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 2.3e-16 92.0 748 21.7
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 5.1e-16 90.9 806 22.6
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 6.7e-16 90.5 157 35.0
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.5e-15 89.4 801 22.8
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.5e-15 89.4 801 22.7
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 1.9e-15 89.0 675 24.0
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.9e-15 89.0 808 21.8
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 3.3e-15 88.2 748 21.8
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 5.6e-15 87.4 761 21.7
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 5.6e-15 87.4 762 22.3
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 7.4e-15 87.0 762 22.7
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 7.4e-15 87.0 801 22.7
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 1.3e-14 86.3 752 21.7
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 1.3e-14 86.3 812 22.0
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 1.6e-14 85.9 800 22.6
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 2.8e-14 85.1 759 22.0
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 4.8e-14 84.3 868 21.8
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 6.2e-14 84.0 830 22.7
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 6.2e-14 84.0 674 22.1
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 8.1e-14 83.6 759 21.5
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 8.1e-14 83.6 242 24.4
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 8.1e-14 83.6 697 22.0
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 8.1e-14 83.6 696 22.8
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 1.8e-13 82.4 785 22.8
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 3.1e-13 81.6 869 22.4
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 4.0e-13 81.3 232 26.7
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 4.0e-13 81.3 242 26.9
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 9.0e-13 80.1 864 22.6
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 9.0e-13 80.1 867 21.2
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 1.2e-12 79.7 661 21.6
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 1.5e-12 79.3 721 21.8
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.5e-12 79.3 796 21.7
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 1.5e-12 79.3 799 21.5
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.5e-12 79.3 746 22.3
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 2.0e-12 79.0 795 22.1
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 2.6e-12 78.6 800 22.1
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 3.4e-12 78.2 860 21.5
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 4.5e-12 77.8 685 21.9
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 4.5e-12 77.8 750 22.0
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 5.8e-12 77.4 763 21.8
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 7.6e-12 77.0 762 21.5
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 7.6e-12 77.0 675 22.4
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 9.9e-12 76.6 155 31.0
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 9.9e-12 76.6 299 26.1
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 1.3e-11 76.3 717 21.9
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.3e-11 76.3 847 21.5
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 1.7e-11 75.9 747 21.3
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 2.2e-11 75.5 803 21.4
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 2.9e-11 75.1 818 21.3
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 2.9e-11 75.1 675 22.4
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 3.8e-11 74.7 788 22.1
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 3.8e-11 74.7 867 21.0
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 3.8e-11 74.7 188 27.1
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 3.8e-11 74.7 794 21.7
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 3.8e-11 74.7 108 33.3
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 6.4e-11 73.9 801 21.0
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 6.4e-11 73.9 752 21.7
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 1.9e-10 72.4 759 22.1
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 2.4e-10 72.0 878 21.4
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 3.2e-10 71.6 719 22.1
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 4.2e-10 71.2 824 20.9
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 7.1e-10 70.5 810 20.9
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 7.1e-10 70.5 858 21.4
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 9.3e-10 70.1 681 21.9
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 1.2e-09 69.7 663 22.6
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 1.2e-09 69.7 751 20.5
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.2e-09 69.7 761 21.6
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 1.2e-09 69.7 748 22.2
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.2e-09 69.7 737 20.9
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 1.6e-09 69.3 672 21.3
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 1.6e-09 69.3 810 21.5
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.7e-09 68.6 811 21.5
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.7e-09 68.6 868 20.7
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 3.5e-09 68.2 664 22.0
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 4.6e-09 67.8 656 22.0
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 4.6e-09 67.8 822 22.5
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 6.0e-09 67.4 811 21.5
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 7.9e-09 67.0 734 21.1
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 1.0e-08 66.6 687 20.8
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 1.8e-08 65.9 758 20.8
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.3e-08 65.5 811 21.3
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 3.9e-08 64.7 657 21.2
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 8.7e-08 63.5 803 20.3
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 1.1e-07 63.2 671 20.9
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.3e-07 61.6 803 21.2
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 5.6e-07 60.8 705 21.0
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 9.6e-07 60.1 776 21.3
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 2.1e-06 58.9 750 21.3
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 4.8e-06 57.8 779 21.1
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 8.2e-06 57.0 712 20.8


User provided reference genes

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