Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO07G343 Micromonas commoda HOM05D005328 ORTHO05D006049 3.6e-170 602.1 449 100.0
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 1.0e-15 89.0 453 27.2
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 3.9e-15 87.0 460 25.9
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 6.7e-15 86.3 453 24.7
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.1e-14 85.5 152 34.9
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.9e-14 84.7 153 40.5
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 2.5e-14 84.3 461 24.7
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.3e-14 84.0 153 33.3
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 4.3e-14 83.6 153 33.3
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 4.3e-14 83.6 153 33.3
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 4.3e-14 83.6 153 39.9
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 4.3e-14 83.6 150 35.3
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.3e-14 83.6 452 25.4
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 7.4e-14 82.8 461 25.2
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 2.1e-13 81.3 451 24.8
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 2.8e-13 80.9 154 32.5
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 2.8e-13 80.9 466 24.0
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 2.8e-13 80.9 156 42.3
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 4.8e-13 80.1 468 27.6
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 4.8e-13 80.1 143 35.0
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 4.8e-13 80.1 154 33.8
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 6.2e-13 79.7 454 29.1
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 6.2e-13 79.7 145 35.2
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 8.1e-13 79.3 455 33.2
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 8.1e-13 79.3 141 34.8
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 1.4e-12 78.6 150 35.3
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 1.4e-12 78.6 151 32.5
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 1.4e-12 78.6 152 32.9
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 1.8e-12 78.2 153 34.0
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.8e-12 78.2 153 33.3
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 2.4e-12 77.8 152 34.2
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 2.4e-12 77.8 153 32.7
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 3.1e-12 77.4 144 33.3
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 4.0e-12 77.0 156 39.1
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 4.0e-12 77.0 470 32.1
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 4.0e-12 77.0 152 33.6
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 4.0e-12 77.0 152 32.2
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 5.3e-12 76.6 454 31.3
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 5.3e-12 76.6 452 26.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 5.3e-12 76.6 158 31.6
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 5.3e-12 76.6 453 33.6
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 6.9e-12 76.3 454 31.1
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 6.9e-12 76.3 161 40.4
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 6.9e-12 76.3 468 23.7
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 9.0e-12 75.9 151 31.1
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 9.0e-12 75.9 144 33.3
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 9.0e-12 75.9 145 32.4
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 9.0e-12 75.9 146 32.9
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 9.0e-12 75.9 461 27.8
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 1.2e-11 75.5 144 32.6
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 1.5e-11 75.1 469 25.4
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.5e-11 75.1 151 41.1
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 1.5e-11 75.1 469 25.4
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 1.5e-11 75.1 156 31.4
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 1.5e-11 75.1 454 28.4
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 2.6e-11 74.3 152 33.6
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 2.6e-11 74.3 455 29.2
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 2.6e-11 74.3 154 31.2
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 3.4e-11 73.9 456 32.5
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 4.5e-11 73.6 455 29.5
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 4.5e-11 73.6 459 31.4
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 5.8e-11 73.2 460 27.4
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 5.8e-11 73.2 461 28.4
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 5.8e-11 73.2 499 25.3
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 7.6e-11 72.8 491 26.5
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.0e-10 72.4 483 23.0
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.0e-10 72.4 146 39.7
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 1.0e-10 72.4 158 30.4
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.0e-10 72.4 461 27.1
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.0e-10 72.4 457 26.3
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 1.3e-10 72.0 500 25.2
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 1.3e-10 72.0 460 30.0
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 1.7e-10 71.6 452 28.1
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 2.2e-10 71.2 158 31.0
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 2.9e-10 70.9 471 37.6
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 3.8e-10 70.5 454 30.8
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 3.8e-10 70.5 153 30.1
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 4.9e-10 70.1 459 29.0
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 6.5e-10 69.7 458 28.4
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 8.4e-10 69.3 454 30.6
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.1e-09 68.9 465 36.3
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 1.4e-09 68.6 461 28.0
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.4e-09 68.6 463 24.4
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 1.4e-09 68.6 449 21.8
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.4e-09 68.6 471 25.7
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.4e-09 68.6 471 25.7
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.5e-09 67.8 147 32.0
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 3.2e-09 67.4 460 27.6
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 3.2e-09 67.4 486 26.1
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 9.3e-09 65.9 475 35.6
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 1.6e-08 65.1 460 25.0
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.7e-08 64.3 451 30.2
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.7e-08 64.3 451 30.2
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 2.7e-08 64.3 465 31.2
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 3.5e-08 63.9 459 27.5
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 6.0e-08 63.2 507 28.8
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.0e-08 63.2 448 26.3
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 7.9e-08 62.8 149 31.5
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 1.8e-07 61.6 525 33.9
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 5.1e-07 60.1 472 29.9
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 1.9e-06 58.2 104 34.6
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 1.9e-06 58.2 159 27.7
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 4.3e-06 57.0 140 30.7
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.7e-06 56.6 438 25.1
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 7.4e-06 56.2 51 47.1
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 9.6e-06 55.8 487 37.8


User provided reference genes

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