Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G537 Micromonas commoda HOM05D002457 ORTHO05D036826 0.0e+00 1135.9 552 100.0
PRCOL_00000421 Prasinoderma coloniale HOM05D002457 ORTHO05D036826 1.6e-42 178.3 372 35.2
PRCOL_00000443 Prasinoderma coloniale HOM05D004419 ORTHO05D049092 1.1e-11 75.9 111 39.6
PRCOL_00004430 Prasinoderma coloniale HOM05D001340 ORTHO05D036826 1.8e-09 68.6 132 34.1
SMO141G0010 Selaginella moellendorffii HOM05D006586 ORTHO05D008254 8.8e-09 66.2 113 29.2
MCO05G292 Micromonas commoda HOM05D004419 ORTHO05D005480 1.7e-07 62.0 125 31.2
THA.LOC104821484 Tarenaya hassleriana HOM05D006586 ORTHO05D008254 2.2e-07 61.6 113 26.5
Ca_20582_v3 Cicer arietinum L. HOM05D004419 ORTHO05D005480 2.8e-07 61.2 118 32.2
Lsat_1_v5_gn_6_50061 Lactuca sativa HOM05D004419 ORTHO05D005480 3.7e-07 60.8 132 31.8
PSO384G3383 Papaver somniferum HOM05D002457 ORTHO05D008732 3.7e-07 60.8 113 30.1
PSO339G5312 Papaver somniferum HOM05D002457 ORTHO05D008732 4.8e-07 60.5 113 29.2
Os01g0546900 Oryza sativa ssp. japonica HOM05D006586 ORTHO05D008254 6.3e-07 60.1 111 28.8
Cre07.g327150 Chlamydomonas reinhardtii HOM05D002457 ORTHO05D005750 8.2e-07 59.7 121 31.4
Glyma.03G205202 Glycine max HOM05D002457 ORTHO05D008732 8.2e-07 59.7 113 27.4
CBR_g68529 Chara braunii HOM05D004419 ORTHO05D005480 1.1e-06 59.3 110 38.2
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.1e-06 59.3 118 32.2
Lj1g0001085 Lotus japonicus HOM05D006586 ORTHO05D008254 1.8e-06 58.5 113 29.2
Rhsim05G0230700 Rhododendron simsii HOM05D002457 ORTHO05D008732 1.8e-06 58.5 113 30.1
HPP92_011039 Vanilla planifolia HOM05D002457 ORTHO05D008732 1.8e-06 58.5 113 28.3
AagrBONN_evm.TU.Sc2ySwM_228.4998 Anthoceros agrestis HOM05D002457 ORTHO05D005750 2.4e-06 58.2 120 28.3
AagrBONN_evm.TU.Sc2ySwM_228.5005 Anthoceros agrestis HOM05D002457 ORTHO05D005750 2.4e-06 58.2 120 28.3
Glyma.12G055000 Glycine max HOM05D004419 ORTHO05D005480 2.4e-06 58.2 118 32.2
HanXRQChr13g0403921 Helianthus annuus HOM05D004419 ORTHO05D005480 2.4e-06 58.2 116 37.1
BcaNung06692 Brassica carinata HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 29.2
C09p70220 Brassica napus HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 29.2
BolC9t59766H Brassica oleracea HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 29.2
Cc06_g06990 Coffea canephora HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 28.3
MCO09G347 Micromonas commoda HOM05D002457 ORTHO05D008732 3.1e-06 57.8 121 33.1
Nitab4.5_0000721g0010 Nicotiana tabacum HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 28.3
Nitab4.5_0012842g0010 Nicotiana tabacum HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 28.3
Peaxi162Scf00203g00029 Petunia axillaris HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 28.3
Hund09455 Selenicereus undatus HOM05D006586 ORTHO05D008254 3.1e-06 57.8 113 31.0
Sopen10g032140 Solanum pennellii HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 27.4
PGSC0003DMG400028132 Solanum tuberosum HOM05D002457 ORTHO05D008732 3.1e-06 57.8 113 27.4
VMungo1127G0574 Vigna mungo HOM05D004419 ORTHO05D005480 3.1e-06 57.8 103 33.0
Glyma.19G202600 Glycine max HOM05D002457 ORTHO05D008732 4.1e-06 57.4 113 27.4
MD14G1175900 Malus domestica HOM05D006586 ORTHO05D008254 4.1e-06 57.4 113 30.1
Solyc10g081630.2 Solanum lycopersicum HOM05D002457 ORTHO05D008732 4.1e-06 57.4 113 26.5
Glyma.11G130600 Glycine max HOM05D004419 ORTHO05D005480 5.3e-06 57.0 119 32.8
Medtr4g066020 Medicago truncatula HOM05D004419 ORTHO05D005480 5.3e-06 57.0 118 32.2
Medtr7g106990 Medicago truncatula HOM05D002457 ORTHO05D008732 5.3e-06 57.0 113 27.4
Phvul.011G056900 Phaseolus vulgaris HOM05D004419 ORTHO05D005480 5.3e-06 57.0 103 33.0
MSTRG.26594 Avicennia marina HOM05D002457 ORTHO05D008732 6.9e-06 56.6 113 29.2
HanXRQChr02g0056491 Helianthus annuus HOM05D004419 ORTHO05D005480 6.9e-06 56.6 125 32.0
SGA_v2.0_scaffold184G40036 Striga asiatica HOM05D002457 ORTHO05D008732 6.9e-06 56.6 113 28.3
Atru.chr8.1279 Acer truncatum HOM05D002457 ORTHO05D008732 9.1e-06 56.2 113 28.3
arahy.Tifrunner.gnm1.ann1.3292NE Arachis hypogaea HOM05D002457 ORTHO05D008732 9.1e-06 56.2 113 26.5
arahy.Tifrunner.gnm1.ann1.V1YZ1K Arachis hypogaea HOM05D002457 ORTHO05D008732 9.1e-06 56.2 113 26.5
DCAR_020678 Daucus carota HOM05D002457 ORTHO05D008732 9.1e-06 56.2 113 28.3
ECA233G0260 Erigeron canadensis HOM05D004419 ORTHO05D005480 9.1e-06 56.2 114 33.3
Lalb_Chr25g0287831 Lupinus albus HOM05D002457 ORTHO05D008732 9.1e-06 56.2 113 26.5
Mapoly0036s0149 Marchantia polymorpha HOM05D004419 ORTHO05D005480 9.1e-06 56.2 114 30.7
Nn7g36075 Nelumbo nucifera HOM05D004419 ORTHO05D005480 9.1e-06 56.2 103 33.0


User provided reference genes

Program Settings