Gene: Sopen10g032140
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g032140
- Transcript Identifier Sopen10g032140.1
- Gene Type Coding gene
- Location Spenn-ch10 : 79559773-79562335 : positive
Gene Family Information
- ID HOM05D002457
- #Genes/#Species 276/99
- Phylogenetic origin
- ID ORTHO05D008732
- #Genes/#Species 115/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen10g032140.1
Descriptions
- Description CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase , F-box domain, Skp2-like , Transcription factor jumonji | BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010030 | ISO | PLAZA Integrative Orthology | positive regulation of seed germination | AT5G06550 |
| GO:0043985 | ISO | PLAZA Integrative Orthology | histone H4-R3 methylation | AT5G06550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0000987 | ISO | PLAZA Integrative Orthology | cis-regulatory region sequence-specific DNA binding | AT5G06550 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G06550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G06550 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.3.8.3 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (JMJD6) |