Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 2.1e-203 712.2 372 100.0
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 1.1e-34 151.8 349 35.8
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 2.8e-27 127.1 360 29.4
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 2.4e-26 124.0 358 28.5
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 1.2e-25 121.7 339 31.6
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 1.5e-25 121.3 363 30.0
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 3.4e-25 120.2 349 31.2
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 5.9e-25 119.4 351 28.8
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 5.9e-25 119.4 351 30.5
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 7.7e-25 119.0 354 29.1
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 2.2e-24 117.5 346 28.3
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 2.9e-24 117.1 355 28.7
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 3.8e-24 116.7 370 28.6
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 5.0e-24 116.3 351 28.2
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 6.5e-24 115.9 360 29.2
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 6.5e-24 115.9 355 29.0
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 6.5e-24 115.9 356 28.9
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 8.5e-24 115.5 354 28.2
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 8.5e-24 115.5 351 28.8
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 8.5e-24 115.5 347 28.5
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 1.1e-23 115.2 346 28.6
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 1.1e-23 115.2 354 28.8
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 1.1e-23 115.2 352 28.4
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 1.4e-23 114.8 354 28.5
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 2.5e-23 114.0 355 28.5
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 3.2e-23 113.6 373 29.2
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 3.2e-23 113.6 351 29.3
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 4.2e-23 113.2 357 28.9
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 5.5e-23 112.8 358 29.3
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 5.5e-23 112.8 350 28.0
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 5.5e-23 112.8 339 28.9
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 7.2e-23 112.5 358 26.3
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 7.2e-23 112.5 351 28.2
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 7.2e-23 112.5 353 28.0
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 9.4e-23 112.1 347 28.8
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 9.4e-23 112.1 347 28.8
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 1.2e-22 111.7 348 28.2
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 1.6e-22 111.3 345 29.6
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 1.6e-22 111.3 342 27.8
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 1.6e-22 111.3 354 29.7
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 1.6e-22 111.3 347 29.7
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 2.1e-22 110.9 340 28.8
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 2.1e-22 110.9 355 28.5
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 2.1e-22 110.9 354 28.2
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 2.1e-22 110.9 350 27.4
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 2.1e-22 110.9 343 28.9
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 3.6e-22 110.2 357 28.0
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.6e-22 110.2 347 28.0
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 6.1e-22 109.4 358 28.5
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 6.1e-22 109.4 357 28.0
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 6.1e-22 109.4 350 27.4
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 6.1e-22 109.4 354 28.0
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 8.0e-22 109.0 342 30.1
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 1.0e-21 108.6 357 28.6
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.0e-21 108.6 354 29.4
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 1.0e-21 108.6 348 28.7
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.4e-21 108.2 342 28.1
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 1.4e-21 108.2 355 27.6
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 1.8e-21 107.8 347 28.2
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.3e-21 107.5 340 29.4
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 2.3e-21 107.5 351 29.9
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 3.9e-21 106.7 354 28.8
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 3.9e-21 106.7 352 30.1
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 5.2e-21 106.3 357 27.5
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 8.8e-21 105.5 351 27.4
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 8.8e-21 105.5 345 27.5
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 8.8e-21 105.5 354 28.8
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 8.8e-21 105.5 353 26.9
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 8.8e-21 105.5 348 29.3
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 1.1e-20 105.1 343 28.3
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 1.1e-20 105.1 357 28.3
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 1.5e-20 104.8 356 28.1
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 2.0e-20 104.4 340 28.5
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 2.6e-20 104.0 357 28.0
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 2.6e-20 104.0 355 27.9
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 2.6e-20 104.0 347 27.7
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 3.3e-20 103.6 350 28.3
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 3.3e-20 103.6 337 28.8
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 3.3e-20 103.6 357 28.6
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 3.3e-20 103.6 374 30.2
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 4.4e-20 103.2 357 26.9
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 4.4e-20 103.2 365 27.4
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 4.4e-20 103.2 361 28.5
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 5.7e-20 102.8 343 29.4
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 7.4e-20 102.4 348 27.6
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 9.7e-20 102.1 345 27.2
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 1.3e-19 101.7 359 28.1
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 2.2e-19 100.9 356 27.0
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 4.8e-19 99.8 344 28.2
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 6.3e-19 99.4 350 28.0
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 1.4e-18 98.2 343 25.7
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 1.2e-17 95.1 337 28.2
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 1.0e-16 92.0 332 27.7
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 2.2e-16 90.9 348 25.0
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 1.1e-15 88.6 345 27.5
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 1.9e-15 87.8 377 23.9
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 9.4e-15 85.5 351 25.4
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 9.4e-15 85.5 341 26.4
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 4.7e-14 83.2 142 36.6
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 8.0e-14 82.4 379 25.9
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.0e-13 82.0 322 27.0
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 1.8e-13 81.3 174 32.8
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 4.0e-13 80.1 345 25.5
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 6.7e-13 79.3 284 31.3
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 1.2e-12 78.6 339 27.1
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 1.3e-11 75.1 163 28.8
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.7e-11 74.7 347 25.9
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 2.4e-10 70.9 92 40.2
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 3.1e-10 70.5 94 38.3
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 3.1e-10 70.5 94 38.3
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 3.1e-10 70.5 104 38.5
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 9.1e-10 68.9 144 34.7
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 1.0e-08 65.5 81 40.7
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 1.0e-08 65.5 81 40.7
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 1.7e-08 64.7 152 32.9
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 2.9e-08 63.9 268 26.5
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 4.2e-07 60.1 273 25.3


User provided reference genes

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