Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI19_g20287_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 2.2e-95 352.4 194 100.0
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 1.6e-50 203.4 185 58.4
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 4.3e-43 178.7 185 55.1
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 3.6e-42 175.6 185 55.7
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 6.2e-42 174.9 185 56.2
PSO302G0133 Papaver somniferum HOM05D002762 ORTHO05D004643 6.2e-42 174.9 172 57.6
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 8.0e-42 174.5 192 53.1
PSO170G0016 Papaver somniferum HOM05D002762 ORTHO05D004643 2.3e-41 172.9 170 58.2
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 5.2e-41 171.8 185 55.7
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 6.8e-41 171.4 185 55.7
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 6.8e-41 171.4 185 55.7
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 3.4e-40 169.1 185 55.1
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 3.4e-40 169.1 185 53.0
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 4.4e-40 168.7 185 53.0
CDE05G1517 Ceratophyllum demersum HOM05D002762 ORTHO05D004643 5.8e-40 168.3 185 49.2
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 5.8e-40 168.3 185 55.1
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 7.5e-40 167.9 185 55.7
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.7e-39 166.8 185 54.6
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 1.7e-39 166.8 186 50.5
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 4.9e-39 165.2 185 53.0
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 6.4e-39 164.9 185 54.6
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 8.3e-39 164.5 185 54.1
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 1.9e-38 163.3 185 53.0
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 3.2e-38 162.5 185 51.4
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 3.2e-38 162.5 185 50.8
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 5.4e-38 161.8 185 50.3
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 5.4e-38 161.8 185 52.4
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 9.2e-38 161.0 185 50.3
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 9.2e-38 161.0 186 50.0
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 1.2e-37 160.6 185 50.3
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 1.2e-37 160.6 185 50.3
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 1.2e-37 160.6 182 53.3
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 1.6e-37 160.2 185 51.4
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 4.6e-37 158.7 185 52.4
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 6.0e-37 158.3 197 50.3
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 7.8e-37 157.9 187 51.3
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 7.8e-37 157.9 185 52.4
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 3.0e-36 156.0 185 49.2
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 3.9e-36 155.6 187 50.3
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 5.0e-36 155.2 184 53.8
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 8.6e-36 154.5 185 48.6
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 8.6e-36 154.5 187 51.3
Aqoxy2G03201 Aquilegia oxysepala HOM05D002762 ORTHO05D004643 1.1e-35 154.1 168 52.4
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 1.1e-35 154.1 185 50.3
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 1.5e-35 153.7 185 50.3
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 1.5e-35 153.7 187 49.2
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 3.3e-35 152.5 185 50.3
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 5.6e-35 151.8 185 51.4
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 9.5e-35 151.0 185 49.7
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 1.2e-34 150.6 185 48.1
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 1.2e-34 150.6 185 49.7
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 1.2e-34 150.6 185 50.8
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 2.1e-34 149.8 185 48.1
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 2.8e-34 149.4 185 47.6
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 2.8e-34 149.4 185 49.7
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 3.6e-34 149.1 185 49.7
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 3.6e-34 149.1 212 46.2
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 3.6e-34 149.1 185 50.3
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 6.2e-34 148.3 185 49.7
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 8.1e-34 147.9 187 47.6
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 8.1e-34 147.9 185 48.1
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 1.1e-33 147.5 185 47.6
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 1.1e-33 147.5 185 48.1
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 1.1e-33 147.5 187 50.8
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 1.4e-33 147.1 185 48.1
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 2.3e-33 146.4 183 50.8
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 4.0e-33 145.6 183 50.8
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 5.2e-33 145.2 183 50.3
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 8.9e-33 144.4 185 46.5
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 2.0e-32 143.3 185 49.2
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 2.0e-32 143.3 183 49.7
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 3.4e-32 142.5 185 49.7
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 3.4e-32 142.5 185 48.6
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 3.4e-32 142.5 185 48.6
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 3.4e-32 142.5 185 46.5
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 4.4e-32 142.1 187 46.0
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 4.4e-32 142.1 188 43.6
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 1.3e-31 140.6 185 46.5
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 2.2e-31 139.8 185 48.1
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 3.7e-31 139.0 185 45.4
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 4.9e-31 138.7 185 47.0
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 1.9e-30 136.7 185 48.6
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 7.1e-30 134.8 186 45.7
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 1.6e-29 133.7 185 45.9
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 4.6e-29 132.1 185 45.4
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 4.6e-29 132.1 185 45.4
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 1.0e-28 131.0 185 44.9
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 1.0e-28 131.0 185 45.9
HPP92_016898 Vanilla planifolia HOM05D000144 ORTHO05D004643 1.0e-28 131.0 164 45.1
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 2.5e-27 126.3 185 44.9
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis HOM05D002762 ORTHO05D004643 3.3e-27 125.9 203 42.9
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 2.1e-26 123.2 185 42.2
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 2.1e-26 123.2 185 41.1
Migut.G00244 Erythranthe guttata HOM05D002762 ORTHO05D004643 4.7e-26 122.1 185 49.7
Zm00001eb115300 Zea mays HOM05D002762 ORTHO05D004643 6.2e-26 121.7 192 48.4
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 1.8e-25 120.2 146 48.6
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 3.1e-25 119.4 188 42.0
Solyc06g054430.1 Solanum lycopersicum HOM05D002762 ORTHO05D004643 6.8e-25 118.2 89 67.4
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 8.9e-25 117.9 185 41.6
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 1.2e-24 117.5 185 40.0
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 2.0e-24 116.7 167 43.1
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 1.3e-23 114.0 185 41.6
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 3.8e-23 112.5 185 40.5
Os11g0641200 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 3.2e-22 109.4 175 39.4
CARHR222230 Cardamine hirsuta HOM05D002762 ORTHO05D004643 2.1e-21 106.7 94 57.4
HanXRQChr11g0325861 Helianthus annuus HOM05D002762 ORTHO05D004643 6.6e-20 101.7 88 58.0
Cpa.g.c35915 Carica papaya HOM05D002762 ORTHO05D004643 2.5e-19 99.8 84 59.5
HanXRQChr11g0325851 Helianthus annuus HOM05D002762 ORTHO05D004643 9.9e-16 87.8 79 58.2
Os10g0148800 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 1.7e-15 87.0 171 32.7
Pp3c6_11940 Physcomitrium patens HOM05D002762 ORTHO05D004643 1.7e-15 87.0 186 34.4
CSS0038196 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.1e-14 84.3 87 55.2
Pp3c6_5440 Physcomitrium patens HOM05D002762 ORTHO05D004643 1.3e-10 70.9 96 42.7
CSS0041788 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 1.6e-10 70.5 83 50.6
Solyc06g054440.2 Solanum lycopersicum HOM05D002762 ORTHO05D004643 3.1e-09 66.2 71 47.9
Cpa.g.c40554 Carica papaya HOM05D002762 ORTHO05D004643 3.4e-08 62.8 71 49.3
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 2.9e-07 59.7 82 45.1


User provided reference genes

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