Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.3e-142 510.4 414 100.0
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.5e-58 231.1 332 69.3
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 3.2e-56 223.4 330 80.6
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.2e-55 221.5 330 78.5
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 1.4e-54 218.0 330 65.8
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 2.6e-53 213.8 332 78.9
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 1.1e-51 208.4 325 78.5
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 4.1e-51 206.5 333 76.3
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 2.0e-50 204.1 325 76.0
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 2.0e-50 204.1 324 79.0
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 1.3e-49 201.4 328 72.3
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.3e-49 201.4 325 77.5
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 1.7e-49 201.1 328 72.0
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 2.2e-49 200.7 327 77.4
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 2.9e-49 200.3 327 77.1
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 3.8e-49 199.9 333 76.0
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 5.0e-49 199.5 324 76.9
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 8.5e-49 198.7 331 75.8
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.4e-48 198.0 324 77.2
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.5e-48 197.2 328 74.1
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 3.2e-48 196.8 324 76.9
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 7.2e-48 195.7 328 75.6
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 9.4e-48 195.3 328 75.0
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.2e-47 194.9 324 76.9
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 2.1e-47 194.1 328 75.0
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.1e-47 194.1 321 77.3
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 2.1e-47 194.1 328 72.0
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 2.7e-47 193.7 318 78.6
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.7e-47 193.0 329 76.9
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 6.1e-47 192.6 328 76.5
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 7.9e-47 192.2 326 77.0
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 7.9e-47 192.2 329 76.0
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 1.0e-46 191.8 330 75.2
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.4e-46 191.4 325 69.8
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 1.4e-46 191.4 328 74.7
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 3.0e-46 190.3 314 78.7
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 1.1e-45 188.3 313 79.2
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.1e-45 188.3 319 78.1
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.1e-45 188.3 328 75.0
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 2.0e-45 187.6 351 70.9
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 2.0e-45 187.6 333 75.4
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.0e-45 187.6 328 74.7
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 2.6e-45 187.2 328 74.1
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 9.7e-45 185.3 328 73.8
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 9.7e-45 185.3 321 76.9
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.3e-44 184.9 327 74.3
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.3e-44 184.9 333 49.2
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 2.2e-44 184.1 327 74.9
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.2e-44 184.1 343 74.3
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 4.8e-44 183.0 324 73.1
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 4.8e-44 183.0 325 72.0
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 4.8e-44 183.0 328 74.7
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 8.2e-44 182.2 319 75.5
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.8e-43 181.0 315 76.2
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 2.4e-43 180.6 327 73.7
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.4e-43 180.6 325 75.1
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 4.1e-43 179.9 326 72.4
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 9.1e-43 178.7 326 76.1
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.2e-42 178.3 330 73.6
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.2e-42 178.3 330 73.6
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.6e-42 177.9 330 73.0
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.6e-42 177.9 371 63.1
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 4.5e-42 176.4 326 75.5
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 5.9e-42 176.0 321 74.8
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 1.0e-41 175.3 328 72.9
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 2.2e-41 174.1 328 72.6
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 8.5e-41 172.2 327 74.3
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 3.2e-40 170.2 326 72.7
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 4.2e-40 169.9 329 72.3
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 4.2e-40 169.9 360 68.1
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 9.4e-40 168.7 311 77.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 2.7e-39 167.2 328 73.8
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.8e-38 164.5 329 72.3
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 1.8e-38 164.5 343 68.8
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 3.0e-38 163.7 334 71.3
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 6.7e-38 162.5 329 72.0
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 6.7e-38 162.5 331 70.4
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 8.8e-38 162.2 311 74.6
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.1e-35 155.2 95 76.8
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.1e-35 153.7 306 76.8
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 5.3e-35 152.9 328 71.3
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 9.1e-35 152.1 297 77.4
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 9.1e-35 152.1 328 71.3
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.0e-34 151.0 327 62.7
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 2.2e-33 147.5 323 61.6
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 1.1e-32 145.2 325 60.9
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.5e-32 144.8 325 68.0
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.5e-32 144.8 320 70.3
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 3.2e-32 143.7 327 52.0
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.6e-31 141.4 318 65.7
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 3.6e-31 140.2 322 60.9
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 3.6e-31 140.2 324 59.6
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 4.0e-30 136.7 325 64.9
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 4.0e-30 136.7 325 64.9
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.5e-29 134.8 322 60.6
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 2.0e-29 134.4 325 64.6
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.4e-29 133.7 284 77.8
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 4.4e-29 133.3 331 63.1
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 7.5e-29 132.5 297 74.7
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 8.3e-28 129.0 284 77.5
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.4e-27 127.5 326 57.4
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 5.4e-27 126.3 295 40.0
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 7.7e-26 122.5 315 44.4
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.9e-25 120.6 87 63.2
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 5.0e-25 119.8 81 70.4
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 2.5e-24 117.5 286 73.8
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.2e-23 115.2 252 62.3
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.4e-21 107.1 125 80.0
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 5.0e-17 93.2 62 66.1
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 6.6e-17 92.8 59 69.5
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 3.3e-16 90.5 61 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 2.6e-13 80.9 325 55.7
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 5.4e-11 73.2 94 41.5
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 7.0e-11 72.8 99 45.5
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.7e-09 68.2 253 26.5
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 8.6e-09 65.9 44 63.6
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 9.5e-08 62.4 40 65.0
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 6.2e-07 59.7 67 40.3
SMO353G0202 Selaginella moellendorffii HOM05D006835 ORTHO05D001299 2.3e-06 57.8 89 36.0
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 3.1e-06 57.4 64 40.6
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 6.8e-06 56.2 61 42.6
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 8.9e-06 55.8 64 39.1
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 8.9e-06 55.8 64 39.1
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 8.9e-06 55.8 64 39.1


User provided reference genes

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