Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g39940_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.4e-47 192.6 96 100.0
MBI14_g28585_MAGBIO Magnolia biondii HOM05D011668 ORTHO05D011598 1.2e-46 189.5 95 97.9
MBI15_g31883_MAGBIO Magnolia biondii HOM05D011668 ORTHO05D011598 2.6e-33 145.2 94 79.8
MBI18_g33676_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 3.5e-22 108.2 65 86.2
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 2.3e-18 95.5 74 62.2
MBI15_g32557_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.3e-18 95.5 74 62.2
MBI17_g44285_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.3e-18 95.5 74 62.2
MBI18_g40791_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 5.2e-18 94.4 74 60.8
MBI02_g32970_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 6.8e-18 94.0 74 60.8
MBI16_g24355_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 6.8e-18 94.0 74 60.8
MBI14_g36712_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 8.9e-18 93.6 66 66.7
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 5.8e-17 90.9 65 66.2
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.1e-15 86.7 65 64.6
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.4e-15 86.3 64 64.1
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 4.1e-15 84.7 66 59.1
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.1e-15 84.7 65 63.1
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 1.2e-14 83.2 65 61.5
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 2.7e-14 82.0 63 61.9
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 2.7e-14 82.0 66 56.1
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 4.6e-14 81.3 92 48.9
CDE11G0683 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 4.6e-14 81.3 64 62.5
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 6.0e-14 80.9 65 56.9
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 7.8e-14 80.5 86 48.8
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.3e-13 79.7 64 57.8
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.3e-13 79.7 87 46.0
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-13 79.0 67 50.7
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-13 79.0 67 50.7
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 3.0e-13 78.6 91 47.3
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 3.0e-13 78.6 81 46.9
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.0e-13 78.6 81 46.9
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.0e-13 78.6 81 46.9
MBI05_g15359_MAGBIO Magnolia biondii HOM05D003323 ORTHO05D011598 3.0e-13 78.6 56 67.9
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.9e-13 78.2 81 45.7
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 3.9e-13 78.2 64 54.7
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.9e-13 78.2 63 54.0
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 6.6e-13 77.4 62 56.5
Gohir.D11G082433 Gossypium hirsutum HOM05D001670 ORTHO05D002980 6.6e-13 77.4 64 54.7
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 6.6e-13 77.4 64 54.7
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 8.6e-13 77.0 65 58.5
Actinidia12668 Actinidia chinensis HOM05D001670 ORTHO05D011598 1.1e-12 76.6 64 54.7
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 1.1e-12 76.6 63 54.0
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.1e-12 76.6 89 44.9
Haze_02723 Corylus avellana HOM05D001670 ORTHO05D002980 1.5e-12 76.3 88 47.7
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.5e-12 76.3 64 50.0
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 2.5e-12 75.5 80 46.2
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 4.3e-12 74.7 62 54.8
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 5.6e-12 74.3 68 50.0
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 5.6e-12 74.3 64 54.7
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 7.3e-12 73.9 62 54.8
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 9.6e-12 73.6 83 43.4
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 9.6e-12 73.6 64 54.7
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 1.2e-11 73.2 63 52.4
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.6e-11 72.8 61 55.7
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.6e-11 72.8 61 55.7
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.6e-11 72.8 64 54.7
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 1.6e-11 72.8 67 50.7
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 1.6e-11 72.8 64 50.0
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.1e-11 72.4 72 47.2
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.1e-11 72.4 85 43.5
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 2.8e-11 72.0 61 54.1
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 2.8e-11 72.0 64 51.6
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 2.8e-11 72.0 64 53.1
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 3.6e-11 71.6 65 47.7
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 3.6e-11 71.6 74 48.6
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 4.7e-11 71.2 62 56.5
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 4.7e-11 71.2 64 46.9
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 4.7e-11 71.2 64 50.0
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 6.2e-11 70.9 64 53.1
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 6.2e-11 70.9 64 50.0
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 6.2e-11 70.9 85 43.5
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 8.1e-11 70.5 61 50.8
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 8.1e-11 70.5 90 40.0
MBI14_g46623_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 8.1e-11 70.5 63 57.1
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.4e-10 69.7 64 50.0
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 1.4e-10 69.7 61 54.1
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 1.8e-10 69.3 64 48.4
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.8e-10 69.3 66 56.1
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 1.8e-10 69.3 63 52.4
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 2.4e-10 68.9 64 50.0
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 2.4e-10 68.9 77 45.5
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 2.4e-10 68.9 62 46.8
Zm00001eb391310 Zea mays HOM05D001670 ORTHO05D011598 2.4e-10 68.9 60 55.0
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 3.1e-10 68.6 64 46.9
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 3.1e-10 68.6 64 48.4
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 3.1e-10 68.6 92 39.1
Lj1A427G6 Lonicera japonica HOM05D001670 ORTHO05D011598 4.0e-10 68.2 64 51.6
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 5.2e-10 67.8 64 46.9
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 5.2e-10 67.8 64 45.3
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 6.8e-10 67.4 64 48.4
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 8.9e-10 67.0 85 41.2
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 8.9e-10 67.0 64 46.9
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 8.9e-10 67.0 64 48.4
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 1.2e-09 66.6 66 54.5
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 1.2e-09 66.6 64 50.0
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.6e-09 65.5 90 38.9
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 3.4e-09 65.1 64 42.2
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 3.4e-09 65.1 63 49.2
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 3.4e-09 65.1 63 49.2
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 4.4e-09 64.7 63 49.2
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 4.4e-09 64.7 90 38.9
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 5.8e-09 64.3 65 49.2
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 5.8e-09 64.3 64 46.9
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 5.8e-09 64.3 63 50.8
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 9.9e-09 63.5 64 46.9
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.3e-08 63.2 64 45.3
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 1.7e-08 62.8 64 45.3
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.7e-08 62.8 63 49.2
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 2.9e-08 62.0 63 46.0
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 3.8e-08 61.6 61 42.6
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 4.9e-08 61.2 64 45.3
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 8.4e-08 60.5 64 43.8
Os03g0102300 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D011598 1.1e-07 60.1 67 44.8
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.4e-07 59.7 64 43.8
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 2.4e-07 58.9 53 52.8
unitig_0.g1315 Utricularia gibba HOM05D001670 ORTHO05D002980 2.4e-07 58.9 88 35.2
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 3.2e-07 58.5 64 43.8
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 4.2e-07 58.2 64 42.2
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 4.2e-07 58.2 64 42.2
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 5.4e-07 57.8 95 33.7
SHI13580 Sapria himalayana HOM05D001670 ORTHO05D011598 5.4e-07 57.8 61 44.3
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 9.3e-07 57.0 64 43.8
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 2.7e-06 55.5 64 39.1
MBI15_g00867_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 3.5e-06 55.1 34 67.6
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 7.8e-06 53.9 63 39.7


User provided reference genes

Program Settings