Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g00420_MAGBIO Magnolia biondii HOM05D002728 ORTHO05D002874 1.7e-30 135.2 62 100.0
MBI14_g17381_MAGBIO Magnolia biondii HOM05D002728 ORTHO05D002874 7.3e-13 76.6 63 61.9
MBI16_g31783_MAGBIO Magnolia biondii HOM05D002728 ORTHO05D002874 2.0e-10 68.6 51 64.7
CSS0050130 Camellia sinensis var. sinensis HOM05D002728 ORTHO05D002874 3.4e-10 67.8 51 60.8
Hma1.2p1_1025F.1_g249360 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 4.4e-10 67.4 58 53.4
CDE10G0114 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 1.7e-09 65.5 51 60.8
CDE10G0899 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 2.2e-09 65.1 51 60.8
Dinv42718 Davidia involucrata HOM05D002728 ORTHO05D002874 2.9e-09 64.7 51 58.8
Dinv43383 Davidia involucrata HOM05D002728 ORTHO05D002874 2.9e-09 64.7 51 58.8
TAR383G0981 Trochodendron aralioides HOM05D002728 ORTHO05D002874 3.7e-09 64.3 51 54.9
CDE10G0012 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 4.9e-09 63.9 51 60.8
GSVIVG01029218001 Vitis vinifera HOM05D002728 ORTHO05D002874 8.3e-09 63.2 51 60.8
Actinidia17316 Actinidia chinensis HOM05D002728 ORTHO05D002874 2.4e-08 61.6 51 54.9
Nn8g38588 Nelumbo nucifera HOM05D002728 ORTHO05D002874 2.4e-08 61.6 51 54.9
HanXRQChr05g0141981 Helianthus annuus HOM05D002728 ORTHO05D002874 3.2e-08 61.2 59 52.5
PSO063G0489 Papaver somniferum HOM05D002728 ORTHO05D002874 3.2e-08 61.2 50 54.0
PSO170G5347 Papaver somniferum HOM05D002728 ORTHO05D002874 3.2e-08 61.2 50 54.0
HanXRQChr12g0365421 Helianthus annuus HOM05D002728 ORTHO05D002874 5.4e-08 60.5 51 54.9
Rhsim03G0264700 Rhododendron simsii HOM05D002728 ORTHO05D002874 5.4e-08 60.5 51 52.9
vmacro06011 Vaccinium macrocarpon HOM05D002728 ORTHO05D002874 5.4e-08 60.5 51 52.9
ECA236G0567 Erigeron canadensis HOM05D002728 ORTHO05D002874 7.1e-08 60.1 51 51.0
PGSC0003DMG403013782 Solanum tuberosum HOM05D002728 ORTHO05D002874 9.2e-08 59.7 51 52.9
Dinv41242 Davidia involucrata HOM05D002728 ORTHO05D002874 1.2e-07 59.3 51 54.9
Hma1.2p1_0155F.1_g068590 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 1.2e-07 59.3 51 54.9
Nitab4.5_0006838g0010 Nicotiana tabacum HOM05D002728 ORTHO05D002874 1.2e-07 59.3 51 52.9
Peaxi162Scf00231g00728 Petunia axillaris HOM05D002728 ORTHO05D002874 1.2e-07 59.3 51 52.9
Sc08g0005300 Simmondsia chinensis HOM05D002728 ORTHO05D002874 1.2e-07 59.3 51 56.9
Ah.14g083770 Amaranthus hybridus HOM05D002728 ORTHO05D002874 1.6e-07 58.9 51 52.9
CAN.G308.33 Capsicum annuum HOM05D002728 ORTHO05D002874 1.6e-07 58.9 51 52.9
Aa31LG5G13420 Aethionema arabicum HOM05D002728 ORTHO05D002874 2.1e-07 58.5 55 47.3
AUR62021305 Chenopodium quinoa HOM05D002728 ORTHO05D002874 2.1e-07 58.5 51 49.0
Lsat_1_v5_gn_8_67780 Lactuca sativa HOM05D002728 ORTHO05D002874 2.7e-07 58.2 51 52.9
Nitab4.5_0004944g0050 Nicotiana tabacum HOM05D002728 ORTHO05D002874 2.7e-07 58.2 51 51.0
Psat5g275120 Pisum sativum HOM05D002728 ORTHO05D002874 2.7e-07 58.2 51 58.8
THA.LOC104802929 Tarenaya hassleriana HOM05D002728 ORTHO05D002874 2.7e-07 58.2 51 54.9
Cfa013500 Carpinus fangiana HOM05D002728 ORTHO05D002874 4.6e-07 57.4 67 44.8
Haze_22088 Corylus avellana HOM05D002728 ORTHO05D002874 4.6e-07 57.4 67 44.8
Solyc07g018300.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 4.6e-07 57.4 51 51.0
Sopen07g007450 Solanum pennellii HOM05D002728 ORTHO05D002874 4.6e-07 57.4 51 51.0
DCAR_020125 Daucus carota HOM05D002728 ORTHO05D010830 6.0e-07 57.0 50 54.0
TAR626G0658 Trochodendron aralioides HOM05D002728 ORTHO05D002874 6.0e-07 57.0 51 54.9
ATR0681G355 Amborella trichopoda HOM05D002728 ORTHO05D002874 7.8e-07 56.6 51 51.0
MSTRG.19298 Avicennia marina HOM05D002728 ORTHO05D002874 7.8e-07 56.6 51 51.0
Eucgr.C02332 Eucalyptus grandis HOM05D002728 ORTHO05D002874 7.8e-07 56.6 51 54.9
Actinidia18150 Actinidia chinensis HOM05D002728 ORTHO05D002874 1.0e-06 56.2 51 52.9
Carub.0003s0205 Capsella rubella HOM05D002728 ORTHO05D002874 1.0e-06 56.2 51 52.9
CiPaw.07G192700 Carya illinoinensis HOM05D002728 ORTHO05D002874 1.0e-06 56.2 67 46.3
Lalb_Chr07g0180521 Lupinus albus HOM05D002728 ORTHO05D002874 1.0e-06 56.2 51 54.9
Medtr4g127950 Medicago truncatula HOM05D002728 ORTHO05D002874 1.0e-06 56.2 51 54.9
PGR044G1401 Punica granatum HOM05D002728 ORTHO05D002874 1.0e-06 56.2 51 54.9
Aqoxy7G03019 Aquilegia oxysepala HOM05D002728 ORTHO05D002874 1.7e-06 55.5 51 45.1
Oeu009852.1 Olea europaea HOM05D002728 ORTHO05D002874 1.7e-06 55.5 63 44.4
QL02p097865 Quercus lobata HOM05D002728 ORTHO05D002874 1.7e-06 55.5 51 52.9
SalBow6G5526 Salvia bowleyana HOM05D002728 ORTHO05D002874 1.7e-06 55.5 50 52.0
BcaNung03547 Brassica carinata HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 49.0
BNapus_Darmor_BZH_scaffold_129p00170 Brassica napus HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 49.0
BolC1t05863H Brassica oleracea HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 49.0
BraA01t04606Z Brassica rapa HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 49.0
Lj4g0022723 Lotus japonicus HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 52.9
Psat0s312g0040 Pisum sativum HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 56.9
Sabra18G0078800 Salix brachista HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 51.0
unitig_22.g5140 Utricularia gibba HOM05D002728 ORTHO05D002874 2.3e-06 55.1 51 49.0
HPP92_018566 Vanilla planifolia HOM05D002728 ORTHO05D002874 2.3e-06 55.1 62 43.5
AL3G12370 Arabidopsis lyrata HOM05D002728 ORTHO05D002874 3.0e-06 54.7 51 52.9
Dinv09620 Davidia involucrata HOM05D002728 ORTHO05D002874 3.0e-06 54.7 51 49.0
Duzib150G0666 Durio zibethinus HOM05D002728 ORTHO05D002874 3.0e-06 54.7 51 52.9
Thhalv10021296m.g Eutrema salsugineum HOM05D002728 ORTHO05D002874 3.0e-06 54.7 51 51.0
Sp3g01980 Schrenkiella parvula HOM05D002728 ORTHO05D002874 3.0e-06 54.7 51 51.0
Solyc10g081830.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 3.0e-06 54.7 49 53.1
Sopen10g032350 Solanum pennellii HOM05D002728 ORTHO05D002874 3.0e-06 54.7 49 53.1
PGSC0003DMG400028143 Solanum tuberosum HOM05D002728 ORTHO05D002874 3.0e-06 54.7 49 53.1
SGA_v2.0_scaffold66G22411 Striga asiatica HOM05D002728 ORTHO05D002874 3.0e-06 54.7 51 49.0
AT3G02920 Arabidopsis thaliana HOM05D002728 ORTHO05D002874 3.9e-06 54.3 51 51.0
Migut.J01489 Erythranthe guttata HOM05D002728 ORTHO05D002874 3.9e-06 54.3 51 51.0
MD13G1252800 Malus domestica HOM05D002728 ORTHO05D002874 3.9e-06 54.3 51 51.0
Prupe.1G085000 Prunus persica HOM05D002728 ORTHO05D002874 3.9e-06 54.3 51 52.9
BcaB04g21396 Brassica carinata HOM05D002728 ORTHO05D002874 5.1e-06 53.9 51 49.0
Ca_21231_v3 Cicer arietinum L. HOM05D002728 ORTHO05D002874 5.1e-06 53.9 51 54.9
MSTRG.6224 Avicennia marina HOM05D002728 ORTHO05D002874 6.6e-06 53.5 51 47.1
RcHm_v2.0_Chr4g0402271 Rosa chinensis HOM05D002728 ORTHO05D002874 6.6e-06 53.5 51 51.0
Sed0008387 Sechium edule HOM05D002728 ORTHO05D002874 8.6e-06 53.1 51 51.0


User provided reference genes

Program Settings