Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g02167_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D002267 6.1e-135 484.2 251 100.0
MBI15_g29838_MAGBIO Magnolia biondii HOM05D002164 ORTHO05D002267 7.0e-46 188.3 113 85.8
MBI04_g41165_MAGBIO Magnolia biondii HOM05D002164 ORTHO05D002267 1.3e-44 184.1 112 83.0
MBI04_g18051_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D025796 4.2e-35 152.5 140 62.9
MBI14_g12134_MAGBIO Magnolia biondii HOM05D002164 ORTHO05D002267 4.2e-35 152.5 94 84.0
MBI18_g01891_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D001955 5.5e-35 152.1 83 91.6
MBI10_g30423_MAGBIO Magnolia biondii HOM05D001959 ORTHO05D001955 2.3e-33 146.7 84 89.3
MBI18_g22302_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D001955 5.7e-32 142.1 84 88.1
MBI04_g44870_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D001955 1.3e-31 141.0 83 88.0
MBI18_g44577_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D001955 2.8e-31 139.8 83 88.0
MBI14_g18365_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D000103 1.1e-30 137.9 83 85.5
MBI17_g42346_MAGBIO Magnolia biondii HOM05D018728 ORTHO05D001955 5.4e-30 135.6 84 81.0
MBI13_g16301_MAGBIO Magnolia biondii HOM05D000180 ORTHO05D000099 1.6e-26 124.0 70 90.0
MBI11_g32116_MAGBIO Magnolia biondii HOM05D002467 ORTHO05D001955 1.5e-16 90.9 54 83.3
TAR629G1422 Trochodendron aralioides HOM05D002164 ORTHO05D002267 7.5e-16 88.6 91 50.5
TAR636G2730 Trochodendron aralioides HOM05D002164 ORTHO05D002267 3.7e-15 86.3 86 52.3
MBI11_g27674_MAGBIO Magnolia biondii HOM05D002467 ORTHO05D001955 6.4e-15 85.5 52 78.8
Duzib084G1318 Durio zibethinus HOM05D002164 ORTHO05D002267 2.0e-13 80.5 86 43.0
GSVIVG01004791001 Vitis vinifera HOM05D002164 ORTHO05D002267 2.7e-13 80.1 95 46.3
Zm00001eb057460 Zea mays HOM05D002164 ORTHO05D002267 3.5e-13 79.7 91 46.2
PSO063G6812 Papaver somniferum HOM05D002164 ORTHO05D002267 7.8e-13 78.6 85 47.1
Nn1g00846 Nelumbo nucifera HOM05D002164 ORTHO05D002267 3.0e-12 76.6 134 38.1
PSO170G4693 Papaver somniferum HOM05D002164 ORTHO05D002267 3.9e-12 76.3 133 36.8
ATR0057G104 Amborella trichopoda HOM05D002164 ORTHO05D002267 8.6e-12 75.1 79 46.8
Os09g0306800 Oryza sativa ssp. japonica HOM05D002164 ORTHO05D002267 1.1e-11 74.7 93 41.9
GSVIVG01013898001 Vitis vinifera HOM05D002164 ORTHO05D002267 1.1e-11 74.7 86 40.7
Gorai.003G112000 Gossypium raimondii HOM05D002164 ORTHO05D002267 2.5e-11 73.6 86 41.9
Os04g0162100 Oryza sativa ssp. japonica HOM05D002164 ORTHO05D002267 3.3e-11 73.2 90 43.3
CSS0044740 Camellia sinensis var. sinensis HOM05D002164 ORTHO05D002267 4.3e-11 72.8 85 43.5
CSS0017888 Camellia sinensis var. sinensis HOM05D002164 ORTHO05D002267 5.6e-11 72.4 85 43.5
Gohir.A07G043900 Gossypium hirsutum HOM05D002164 ORTHO05D002267 5.6e-11 72.4 86 39.5
Gohir.D07G048300 Gossypium hirsutum HOM05D002164 ORTHO05D002267 5.6e-11 72.4 86 39.5
Gorai.001G051500 Gossypium raimondii HOM05D002164 ORTHO05D002267 5.6e-11 72.4 86 39.5
Lj1C975G2 Lonicera japonica HOM05D002164 ORTHO05D002267 5.6e-11 72.4 87 42.5
Thecc.03G147700 Theobroma cacao HOM05D002164 ORTHO05D002267 5.6e-11 72.4 86 40.7
Dinv32353 Davidia involucrata HOM05D002164 ORTHO05D002267 7.3e-11 72.0 85 41.2
EL10Ac3g05881 Beta vulgaris HOM05D002164 ORTHO05D002267 9.5e-11 71.6 85 42.4
Gohir.A03G060200 Gossypium hirsutum HOM05D002164 ORTHO05D002267 9.5e-11 71.6 86 40.7
Gohir.D03G105800 Gossypium hirsutum HOM05D002164 ORTHO05D002267 9.5e-11 71.6 86 40.7
Solyc03g093640.4 Solanum lycopersicum HOM05D002164 ORTHO05D002267 2.8e-10 70.1 86 45.3
COL.COLO4_37330 Corchorus olitorius HOM05D002164 ORTHO05D002267 3.6e-10 69.7 85 38.8
Duzib068G0769 Durio zibethinus HOM05D002164 ORTHO05D002267 3.6e-10 69.7 85 41.2
Zm00001eb309520 Zea mays HOM05D002164 ORTHO05D002267 3.6e-10 69.7 92 41.3
Dinv12863 Davidia involucrata HOM05D002164 ORTHO05D002267 4.7e-10 69.3 85 38.8
Lj8A48G37 Lonicera japonica HOM05D002164 ORTHO05D002267 4.7e-10 69.3 100 43.0
Atru.chr1.1554 Acer truncatum HOM05D002164 ORTHO05D002267 8.0e-10 68.6 113 36.3
Aqoxy3G02713 Aquilegia oxysepala HOM05D002164 ORTHO05D002267 8.0e-10 68.6 91 49.5
Duzib205G1697 Durio zibethinus HOM05D002164 ORTHO05D002267 8.0e-10 68.6 85 38.8
Peaxi162Scf01305g00028 Petunia axillaris HOM05D002164 ORTHO05D002267 8.0e-10 68.6 86 45.3
Sopen03g024510 Solanum pennellii HOM05D002164 ORTHO05D002267 1.4e-09 67.8 86 44.2
Nitab4.5_0000600g0150 Nicotiana tabacum HOM05D002164 ORTHO05D002267 1.8e-09 67.4 117 35.9
HPP92_008898 Vanilla planifolia HOM05D002164 ORTHO05D002267 1.8e-09 67.4 88 43.2
Atru.chr1.1562 Acer truncatum HOM05D002164 ORTHO05D002267 3.1e-09 66.6 86 41.9
SEGI_16877 Sequoiadendron giganteum HOM05D002164 ORTHO05D002267 3.1e-09 66.6 85 43.5
CAN.G388.41 Capsicum annuum HOM05D002164 ORTHO05D002267 4.0e-09 66.2 82 43.9
Cpa.g.sc13.243 Carica papaya HOM05D002164 ORTHO05D002267 4.0e-09 66.2 85 40.0
HPP92_008894 Vanilla planifolia HOM05D002164 ORTHO05D002267 5.2e-09 65.9 74 45.9
PGR042G2377 Punica granatum HOM05D002164 ORTHO05D002267 6.8e-09 65.5 89 38.2
CSS0021488 Camellia sinensis var. sinensis HOM05D002164 ORTHO05D002267 8.9e-09 65.1 85 40.0
SalBow6G1922 Salvia bowleyana HOM05D002164 ORTHO05D002267 8.9e-09 65.1 85 42.4
Nitab4.5_0001472g0030 Nicotiana tabacum HOM05D002164 ORTHO05D002267 1.2e-08 64.7 89 44.9
Sed0004355 Sechium edule HOM05D002164 ORTHO05D002267 1.2e-08 64.7 85 38.8
CAN.G247.10 Capsicum annuum HOM05D002164 ORTHO05D002267 2.0e-08 63.9 81 43.2
ECA233G4451 Erigeron canadensis HOM05D002164 ORTHO05D002267 2.0e-08 63.9 79 38.0
Potri.001G080200 Populus trichocarpa HOM05D002164 ORTHO05D002267 2.6e-08 63.5 86 44.2
CsaV3_4G004260 Cucumis sativus L. HOM05D002164 ORTHO05D002267 5.8e-08 62.4 85 37.6
Manes.06G130800 Manihot esculenta HOM05D002164 ORTHO05D002267 5.8e-08 62.4 66 42.4
Nitab4.5_0007599g0010 Nicotiana tabacum HOM05D002164 ORTHO05D002267 5.8e-08 62.4 93 39.8
Prupe.4G152500 Prunus persica HOM05D002164 ORTHO05D002267 5.8e-08 62.4 85 36.5
SGA_v2.0_scaffold136G34993 Striga asiatica HOM05D002164 ORTHO05D002267 5.8e-08 62.4 85 41.2
TWI23G0847 Tripterygium wilfordii HOM05D002164 ORTHO05D002267 5.8e-08 62.4 86 40.7
Hma1.2p1_0502F.1_g167760 Hydrangea macrophylla HOM05D002164 ORTHO05D002267 7.5e-08 62.0 112 29.5
Lsat_1_v5_gn_2_127041 Lactuca sativa HOM05D002164 ORTHO05D002267 7.5e-08 62.0 82 40.2
MD11G1274700 Malus domestica HOM05D002164 ORTHO05D002267 7.5e-08 62.0 86 36.0
Manes.14G039200 Manihot esculenta HOM05D002164 ORTHO05D002267 9.8e-08 61.6 66 45.5
Nitab4.5_0002153g0020 Nicotiana tabacum HOM05D002164 ORTHO05D002267 1.3e-07 61.2 86 41.9
Sabra03G0109000 Salix brachista HOM05D002164 ORTHO05D002267 1.3e-07 61.2 86 41.9
Actinidia13615 Actinidia chinensis HOM05D002164 ORTHO05D002267 1.7e-07 60.8 85 38.8
Actinidia31665 Actinidia chinensis HOM05D002164 ORTHO05D002267 1.7e-07 60.8 85 37.6
Rhsim03G0160600 Rhododendron simsii HOM05D002164 ORTHO05D002267 1.7e-07 60.8 85 37.6
ClCG07G017040 Citrullus lanatus HOM05D002164 ORTHO05D002267 2.2e-07 60.5 97 36.1
MELO3C017639.2 Cucumis melo HOM05D002164 ORTHO05D002267 2.2e-07 60.5 85 36.5
Oeu045399.1 Olea europaea HOM05D002164 ORTHO05D002267 2.2e-07 60.5 85 38.8
MD03G1252500 Malus domestica HOM05D002164 ORTHO05D002267 2.9e-07 60.1 86 36.0
Potri.003G150450 Populus trichocarpa HOM05D002164 ORTHO05D002267 2.9e-07 60.1 86 40.7
Sed0010479 Sechium edule HOM05D002164 ORTHO05D002267 2.9e-07 60.1 85 36.5
CANSAT56G4389 Cannabis sativa HOM05D002164 ORTHO05D002267 3.7e-07 59.7 85 30.6
CiPaw.07G184300 Carya illinoinensis HOM05D002164 ORTHO05D002267 3.7e-07 59.7 86 36.0
FvH4_3g17191 Fragaria vesca HOM05D002164 ORTHO05D002267 3.7e-07 59.7 86 33.7
FAN11G0474 Fragaria x ananassa HOM05D002164 ORTHO05D002267 3.7e-07 59.7 86 33.7
RcHm_v2.0_Chr5g0028591 Rosa chinensis HOM05D002164 ORTHO05D002267 3.7e-07 59.7 86 33.7
MSTRG.8403 Avicennia marina HOM05D002164 ORTHO05D002267 4.9e-07 59.3 85 37.6
FAN21G1161 Fragaria x ananassa HOM05D000061 ORTHO05D002267 4.9e-07 59.3 86 33.7
Haze_22210 Corylus avellana HOM05D002164 ORTHO05D002267 6.4e-07 58.9 86 36.0
Migut.F01204 Erythranthe guttata HOM05D002164 ORTHO05D002267 6.4e-07 58.9 85 38.8
FAN16G0980 Fragaria x ananassa HOM05D002164 ORTHO05D002267 6.4e-07 58.9 86 33.7
FAN25G2331 Fragaria x ananassa HOM05D002164 ORTHO05D002267 6.4e-07 58.9 86 33.7
CiPaw.08G042100 Carya illinoinensis HOM05D002164 ORTHO05D002267 8.3e-07 58.5 87 36.8
ECA232G2610 Erigeron canadensis HOM05D002164 ORTHO05D002267 8.3e-07 58.5 81 40.7
Cc02_g04790 Coffea canephora HOM05D002164 ORTHO05D002267 1.1e-06 58.2 85 37.6
HanXRQChr08g0222791 Helianthus annuus HOM05D002164 ORTHO05D002267 1.4e-06 57.8 81 39.5
BcaB05g24015 Brassica carinata HOM05D002164 ORTHO05D002267 1.9e-06 57.4 79 36.7
BcaB08g35482 Brassica carinata HOM05D002164 ORTHO05D002267 1.9e-06 57.4 85 37.6
BcaC04g20712 Brassica carinata HOM05D002164 ORTHO05D002267 1.9e-06 57.4 85 37.6
A10p09010 Brassica napus HOM05D002164 ORTHO05D002267 1.9e-06 57.4 85 37.6
C09p39990 Brassica napus HOM05D002164 ORTHO05D002267 1.9e-06 57.4 85 37.6
BolC9t56896H Brassica oleracea HOM05D002164 ORTHO05D002267 1.9e-06 57.4 85 37.6
BraA02t06306Z Brassica rapa HOM05D002164 ORTHO05D002267 1.9e-06 57.4 79 36.7
BraA10t42985Z Brassica rapa HOM05D002164 ORTHO05D002267 1.9e-06 57.4 85 37.6
Ciclev10004955m.g Citrus clementina HOM05D002164 ORTHO05D002267 1.9e-06 57.4 86 38.4
Eucgr.A02925 Eucalyptus grandis HOM05D002164 ORTHO05D002267 1.9e-06 57.4 86 38.4
BcaC03g14618 Brassica carinata HOM05D002164 ORTHO05D002267 2.4e-06 57.0 79 36.7
A02p12420 Brassica napus HOM05D002164 ORTHO05D002267 2.4e-06 57.0 79 36.7
C02p20530 Brassica napus HOM05D002164 ORTHO05D002267 2.4e-06 57.0 79 36.7
BolC2t08189H Brassica oleracea HOM05D002164 ORTHO05D002267 2.4e-06 57.0 79 36.7
CDE05G2554 Ceratophyllum demersum HOM05D002164 ORTHO05D002267 2.4e-06 57.0 119 33.6
Hund04563 Selenicereus undatus HOM05D002164 ORTHO05D002267 2.4e-06 57.0 90 33.3
AUR62015456 Chenopodium quinoa HOM05D002164 ORTHO05D002267 4.1e-06 56.2 85 35.3
AUR62002245 Chenopodium quinoa HOM05D002164 ORTHO05D002267 5.4e-06 55.8 90 32.2
AL8G25510 Arabidopsis lyrata HOM05D002164 ORTHO05D002267 7.0e-06 55.5 85 37.6
Lsat_1_v5_gn_8_9821 Lactuca sativa HOM05D002164 ORTHO05D002267 9.2e-06 55.1 81 37.0


User provided reference genes

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